Literature DB >> 25468359

DNA barcodes for ecology, evolution, and conservation.

W John Kress1, Carlos García-Robledo2, Maria Uriarte3, David L Erickson4.   

Abstract

The use of DNA barcodes, which are short gene sequences taken from a standardized portion of the genome and used to identify species, is entering a new phase of application as more and more investigations employ these genetic markers to address questions relating to the ecology and evolution of natural systems. The suite of DNA barcode markers now applied to specific taxonomic groups of organisms are proving invaluable for understanding species boundaries, community ecology, functional trait evolution, trophic interactions, and the conservation of biodiversity. The application of next-generation sequencing (NGS) technology will greatly expand the versatility of DNA barcodes across the Tree of Life, habitats, and geographies as new methodologies are explored and developed. Published by Elsevier Ltd.

Keywords:  DNA barcodes; ecology; next generation sequencing; phylogenetics; taxonomy

Mesh:

Year:  2014        PMID: 25468359     DOI: 10.1016/j.tree.2014.10.008

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  73 in total

1.  A TME study with the fungicide pyrimethanil combined with different moisture regimes: effects on enchytraeids.

Authors:  Cornelia Bandow; Ee Ling Ng; Rüdiger M Schmelz; José Paulo Sousa; Jörg Römbke
Journal:  Ecotoxicology       Date:  2015-11-07       Impact factor: 2.823

2.  Limited tolerance by insects to high temperatures across tropical elevational gradients and the implications of global warming for extinction.

Authors:  Carlos García-Robledo; Erin K Kuprewicz; Charles L Staines; Terry L Erwin; W John Kress
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-04       Impact factor: 11.205

3.  DNA Barcoding of an Assembly of Montane Andean Butterflies (Satyrinae): Geographical Scale and Identification Performance.

Authors:  M A Marín; I C Cadavid; L Valdés; C F Álvarez; S I Uribe; R Vila; T W Pyrcz
Journal:  Neotrop Entomol       Date:  2017-01-23       Impact factor: 1.434

4.  A protocol for obtaining DNA barcodes from plant and insect fragments isolated from forensic-type soils.

Authors:  Kelly A Meiklejohn; Megan L Jackson; Libby A Stern; James M Robertson
Journal:  Int J Legal Med       Date:  2018-02-08       Impact factor: 2.686

5.  From writing to reading the encyclopedia of life.

Authors:  Paul D N Hebert; Peter M Hollingsworth; Mehrdad Hajibabaei
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-09-05       Impact factor: 6.237

6.  2'-Deoxy-2'-fluoro-arabinonucleic acid: a valid alternative to DNA for biotechnological applications using charge transport.

Authors:  Ruijie D Teo; Elizabeth R Smithwick; Agostino Migliore
Journal:  Phys Chem Chem Phys       Date:  2019-10-24       Impact factor: 3.676

7.  Experimental assemblage of novel plant-herbivore interactions: ecological host shifts after 40 million years of isolation.

Authors:  Carlos Garcia-Robledo; Carol C Horvitz; W John Kress; A Nalleli Carvajal-Acosta; Terry L Erwin; Charles L Staines
Journal:  Biotropica       Date:  2017-07-04       Impact factor: 2.508

8.  Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve.

Authors:  Angela C Telfer; Monica R Young; Jenna Quinn; Kate Perez; Crystal N Sobel; Jayme E Sones; Valerie Levesque-Beaudin; Rachael Derbyshire; Jose Fernandez-Triana; Rodolphe Rougerie; Abinah Thevanayagam; Adrian Boskovic; Alex V Borisenko; Alex Cadel; Allison Brown; Anais Pages; Anibal H Castillo; Annegret Nicolai; Barb Mockford Glenn Mockford; Belén Bukowski; Bill Wilson; Brock Trojahn; Carole Ann Lacroix; Chris Brimblecombe; Christoper Hay; Christmas Ho; Claudia Steinke; Connor P Warne; Cristina Garrido Cortes; Daniel Engelking; Danielle Wright; Dario A Lijtmaer; David Gascoigne; David Hernandez Martich; Derek Morningstar; Dirk Neumann; Dirk Steinke; Donna DeBruin Marco DeBruin; Dylan Dobias; Elizabeth Sears; Ellen Richard; Emily Damstra; Evgeny V Zakharov; Frederic Laberge; Gemma E Collins; Gergin A Blagoev; Gerrie Grainge; Graham Ansell; Greg Meredith; Ian Hogg; Jaclyn McKeown; Janet Topan; Jason Bracey; Jerry Guenther; Jesse Sills-Gilligan; Joseph Addesi; Joshua Persi; Kara K S Layton; Kareina D'Souza; Kencho Dorji; Kevin Grundy; Kirsti Nghidinwa; Kylee Ronnenberg; Kyung Min Lee; Linxi Xie; Liuqiong Lu; Lyubomir Penev; Mailyn Gonzalez; Margaret E Rosati; Mari Kekkonen; Maria Kuzmina; Marianne Iskandar; Marko Mutanen; Maryam Fatahi; Mikko Pentinsaari; Miriam Bauman; Nadya Nikolova; Natalia V Ivanova; Nathaniel Jones; Nimalka Weerasuriya; Norman Monkhouse; Pablo D Lavinia; Paul Jannetta; Priscila E Hanisch; R Troy McMullin; Rafael Ojeda Flores; Raphaëlle Mouttet; Reid Vender; Renee N Labbee; Robert Forsyth; Rob Lauder; Ross Dickson; Ruth Kroft; Scott E Miller; Shannon MacDonald; Sishir Panthi; Stephanie Pedersen; Stephanie Sobek-Swant; Suresh Naik; Tatsiana Lipinskaya; Thanushi Eagalle; Thibaud Decaëns; Thibault Kosuth; Thomas Braukmann; Tom Woodcock; Tomas Roslin; Tony Zammit; Victoria Campbell; Vlad Dinca; Vlada Peneva; Paul D N Hebert; Jeremy R deWaard
Journal:  Biodivers Data J       Date:  2015-08-30

9.  DNA barcodes reveal microevolutionary signals in fire response trait in two legume genera.

Authors:  Abubakar Bello; Barnabas H Daru; Charles H Stirton; Samson B M Chimphango; Michelle van der Bank; Olivier Maurin; A Muthama Muasya
Journal:  AoB Plants       Date:  2015-10-27       Impact factor: 3.276

10.  Mitonuclear coevolution as the genesis of speciation and the mitochondrial DNA barcode gap.

Authors:  Geoffrey E Hill
Journal:  Ecol Evol       Date:  2016-07-22       Impact factor: 2.912

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