Literature DB >> 27481778

From writing to reading the encyclopedia of life.

Paul D N Hebert1, Peter M Hollingsworth2, Mehrdad Hajibabaei3.   

Abstract

Prologue 'As the study of natural science advances, the language of scientific description may be greatly simplified and abridged. This has already been done by Linneaus and may be carried still further by other invention. The descriptions of natural orders and genera may be reduced to short definitions, and employment of signs, somewhat in the manner of algebra, instead of long descriptions. It is more easy to conceive this, than it is to conceive with what facility, and in how short a time, a knowledge of all the objects of natural history may ultimately be acquired; and that which is now considered learning and science, and confined to a few specially devoted to it, may at length be universally possessed in every civilized country and in every rank of life'. J. C. Louden 1829. Magazine of natural history, vol. 1: This article is part of the themed issue 'From DNA barcodes to biomes'.
© 2016 The Author(s).

Keywords:  DNA barcoding; biodiversity; genomics; species

Mesh:

Year:  2016        PMID: 27481778      PMCID: PMC4971178          DOI: 10.1098/rstb.2015.0321

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  99 in total

1.  Limits of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences as species barcodes for Fungi.

Authors:  Levente Kiss
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-19       Impact factor: 11.205

2.  Increasing global participation in genetics research through DNA barcoding.

Authors:  Sarah J Adamowicz; Dirk Steinke
Journal:  Genome       Date:  2015-12       Impact factor: 2.166

3.  Wedding biodiversity inventory of a large and complex Lepidoptera fauna with DNA barcoding.

Authors:  Daniel H Janzen; Mehrdad Hajibabaei; John M Burns; Winnie Hallwachs; Ed Remigio; Paul D N Hebert
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

4.  Extreme mtDNA divergences in a terrestrial slug (Gastropoda, Pulmonata, Arionidae): accelerated evolution, allopatric divergence and secondary contact.

Authors:  J Pinceel; K Jordaens; T Backeljau
Journal:  J Evol Biol       Date:  2005-09       Impact factor: 2.411

Review 5.  Gene tree discordance, phylogenetic inference and the multispecies coalescent.

Authors:  James H Degnan; Noah A Rosenberg
Journal:  Trends Ecol Evol       Date:  2009-03-21       Impact factor: 17.712

6.  DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity.

Authors:  Matthieu Leray; Nancy Knowlton
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

7.  Barcoding a quantified food web: crypsis, concepts, ecology and hypotheses.

Authors:  M Alex Smith; Eldon S Eveleigh; Kevin S McCann; Mark T Merilo; Peter C McCarthy; Kathleen I Van Rooyen
Journal:  PLoS One       Date:  2011-07-06       Impact factor: 3.240

8.  Monitoring an alien invasion: DNA barcoding and the identification of lionfish and their prey on coral reefs of the Mexican Caribbean.

Authors:  Martha Valdez-Moreno; Carolina Quintal-Lizama; Ricardo Gómez-Lozano; María Del Carmen García-Rivas
Journal:  PLoS One       Date:  2012-06-01       Impact factor: 3.240

9.  Turning Up the Heat on a Hotspot: DNA Barcodes Reveal 80% More Species of Geometrid Moths along an Andean Elevational Gradient.

Authors:  Gunnar Brehm; Paul D N Hebert; Robert K Colwell; Marc-Oliver Adams; Florian Bodner; Katrin Friedemann; Lars Möckel; Konrad Fiedler
Journal:  PLoS One       Date:  2016-03-09       Impact factor: 3.240

10.  DNA barcode-based delineation of putative species: efficient start for taxonomic workflows.

Authors:  Mari Kekkonen; Paul D N Hebert
Journal:  Mol Ecol Resour       Date:  2014-03-10       Impact factor: 7.090

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  11 in total

1.  Opinion: Intercepting pandemics through genomics.

Authors:  W John Kress; Jonna A K Mazet; Paul D N Hebert
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-03       Impact factor: 11.205

2.  Field-based species identification of closely-related plants using real-time nanopore sequencing.

Authors:  Joe Parker; Andrew J Helmstetter; Dion Devey; Tim Wilkinson; Alexander S T Papadopulos
Journal:  Sci Rep       Date:  2017-08-21       Impact factor: 4.379

3.  Genome skimming herbarium specimens for DNA barcoding and phylogenomics.

Authors:  Chun-Xia Zeng; Peter M Hollingsworth; Jing Yang; Zheng-Shan He; Zhi-Rong Zhang; De-Zhu Li; Jun-Bo Yang
Journal:  Plant Methods       Date:  2018-06-05       Impact factor: 4.993

4.  Cytochrome c oxidase subunit 1 gene as a DNA barcode for discriminating Trypanosoma cruzi DTUs and closely related species.

Authors:  Marina Silva Rodrigues; Karina Alessandra Morelli; Ana Maria Jansen
Journal:  Parasit Vectors       Date:  2017-10-16       Impact factor: 3.876

Review 5.  Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia.

Authors:  Gillian H Dean; Rani Asmarayani; Marlina Ardiyani; Yessi Santika; Teguh Triono; Sarah Mathews; Campbell O Webb
Journal:  Appl Plant Sci       Date:  2018-07-13       Impact factor: 1.936

6.  Linking morphological and molecular taxonomy for the identification of poultry house, soil, and nest dwelling mites in the Western Palearctic.

Authors:  Monica R Young; María L Moraza; Eddie Ueckermann; Dieter Heylen; Lisa F Baardsen; Jose Francisco Lima-Barbero; Shira Gal; Efrat Gavish-Regev; Yuval Gottlieb; Lise Roy; Eitan Recht; Marine El Adouzi; Eric Palevsky
Journal:  Sci Rep       Date:  2019-04-08       Impact factor: 4.379

7.  Filling reference gaps via assembling DNA barcodes using high-throughput sequencing-moving toward barcoding the world.

Authors:  Shanlin Liu; Chentao Yang; Chengran Zhou; Xin Zhou
Journal:  Gigascience       Date:  2017-12-01       Impact factor: 6.524

8.  A Sequel to Sanger: amplicon sequencing that scales.

Authors:  Paul D N Hebert; Thomas W A Braukmann; Sean W J Prosser; Sujeevan Ratnasingham; Jeremy R deWaard; Natalia V Ivanova; Daniel H Janzen; Winnie Hallwachs; Suresh Naik; Jayme E Sones; Evgeny V Zakharov
Journal:  BMC Genomics       Date:  2018-03-27       Impact factor: 3.969

9.  Editorial: Parasite Infections: From Experimental Models to Natural Systems.

Authors:  Toni Aebischer; Kai Matuschewski; Susanne Hartmann
Journal:  Front Cell Infect Microbiol       Date:  2018-02-02       Impact factor: 5.293

10.  Large geographic distance versus small DNA barcode divergence: Insights from a comparison of European to South Siberian Lepidoptera.

Authors:  Peter Huemer; Paul D N Hebert; Marko Mutanen; Christian Wieser; Benjamin Wiesmair; Axel Hausmann; Roman Yakovlev; Markus Möst; Brigitte Gottsberger; Patrick Strutzenberger; Konrad Fiedler
Journal:  PLoS One       Date:  2018-11-02       Impact factor: 3.240

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