Literature DB >> 25467125

Recognition of antigen-specific B-cell receptors from chronic lymphocytic leukemia patients by synthetic antigen surrogates.

Mohosin Sarkar1, Yun Liu2, Jumpei Morimoto1, Haiyong Peng3, Claudio Aquino1, Christoph Rader4, Nicholas Chiorazzi2, Thomas Kodadek5.   

Abstract

In patients with chronic lymphocytic leukemia (CLL), a single neoplastic antigen-specific B cell accumulates and overgrows other B cells, leading to immune deficiency. CLL is often treated with drugs that ablate all B cells, leading to further weakening of humoral immunity, and a more focused therapeutic strategy capable of targeting only the pathogenic B cells would represent a significant advance. One approach to this would be to develop synthetic surrogates of the CLL antigens allowing differentiation of the CLL cells and healthy B cells in a patient. Here, we describe nonpeptidic molecules capable of targeting antigen-specific B cell receptors with good affinity and selectivity using a combinatorial library screen. We demonstrate that our hit compounds act as synthetic antigen surrogates and recognize CLL cells and not healthy B cells. Additionally, we argue that the technology we developed can be used to identify other classes of antigen surrogates.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25467125      PMCID: PMC4272629          DOI: 10.1016/j.chembiol.2014.10.010

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  23 in total

1.  Isolation of protein ligands from large peptoid libraries.

Authors:  Prasanna G Alluri; M Muralidhar Reddy; Kiran Bachhawat-Sikder; Hernando J Olivos; Thomas Kodadek
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

Review 2.  Chronic lymphocytic leukemia.

Authors:  Nicholas Chiorazzi; Kanti R Rai; Manlio Ferrarini
Journal:  N Engl J Med       Date:  2005-02-24       Impact factor: 91.245

3.  A rapid library screen for tailoring beta-peptide structure and function.

Authors:  Joshua A Kritzer; Nathan W Luedtke; Elizabeth A Harker; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2005-10-26       Impact factor: 15.419

4.  Chronic lymphocytic leukemia cells recognize conserved epitopes associated with apoptosis and oxidation.

Authors:  Rosa Catera; Gregg J Silverman; Katerina Hatzi; Till Seiler; Sebastien Didier; Lu Zhang; Maxime Hervé; Eric Meffre; David G Oscier; Helen Vlassara; R Hal Scofield; Yifang Chen; Steven L Allen; Jonathan Kolitz; Kanti R Rai; Charles C Chu; Nicholas Chiorazzi
Journal:  Mol Med       Date:  2008-09-25       Impact factor: 6.354

5.  Water-soluble taxol conjugates with dextran and targets tumor cells by folic acid immobilization.

Authors:  Junichi Nakamura; Naoki Nakajima; Kazuaki Matsumura; Suong-Hyu Hyon
Journal:  Anticancer Res       Date:  2010-03       Impact factor: 2.480

6.  Many chronic lymphocytic leukemia antibodies recognize apoptotic cells with exposed nonmuscle myosin heavy chain IIA: implications for patient outcome and cell of origin.

Authors:  Charles C Chu; Rosa Catera; Lu Zhang; Sebastien Didier; Briana M Agagnina; Rajendra N Damle; Matthew S Kaufman; Jonathan E Kolitz; Steven L Allen; Kanti R Rai; Nicholas Chiorazzi
Journal:  Blood       Date:  2010-01-28       Impact factor: 22.113

7.  Combinatorial chemistry identifies high-affinity peptidomimetics against alpha4beta1 integrin for in vivo tumor imaging.

Authors:  Li Peng; Ruiwu Liu; Jan Marik; Xiaobing Wang; Yoshikazu Takada; Kit S Lam
Journal:  Nat Chem Biol       Date:  2006-06-11       Impact factor: 15.040

8.  Characterization of structurally defined epitopes recognized by monoclonal antibodies produced by chronic lymphocytic leukemia B cells.

Authors:  Till Seiler; Manuela Woelfle; Sophia Yancopoulos; Rosa Catera; Wentian Li; Katerina Hatzi; Carol Moreno; Marcela Torres; Santanu Paul; Hartmut Dohner; Stephan Stilgenbauer; Matthew S Kaufman; Jonathan E Kolitz; Steven L Allen; Kanti R Rai; Charles C Chu; Nicholas Chiorazzi
Journal:  Blood       Date:  2009-08-18       Impact factor: 22.113

9.  Tumor-specific recombinant idiotype immunisation after chemotherapy as initial treatment for follicular non-Hodgkin lymphoma.

Authors:  John M Timmerman; Julie M Vose; Debra K Czerwinski; Wen-Kai Weng; Diane Ingolia; Martha Mayo; Dan W Denney; Ronald Levy
Journal:  Leuk Lymphoma       Date:  2009-01

10.  Dextran as a generally applicable multivalent scaffold for improving immunoglobulin-binding affinities of peptide and peptidomimetic ligands.

Authors:  Jumpei Morimoto; Mohosin Sarkar; Sophia Kenrick; Thomas Kodadek
Journal:  Bioconjug Chem       Date:  2014-07-30       Impact factor: 4.774

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  12 in total

1.  Chromodomain Ligand Optimization via Target-Class Directed Combinatorial Repurposing.

Authors:  Kimberly D Barnash; Kelsey N Lamb; Jacob I Stuckey; Jacqueline L Norris; Stephanie H Cholensky; Dmitri B Kireev; Stephen V Frye; Lindsey I James
Journal:  ACS Chem Biol       Date:  2016-07-14       Impact factor: 5.100

2.  Asymmetric synthesis of vinylogous β-amino acids and their incorporation into mixed backbone oligomers.

Authors:  Hao Wu; Hongchan An; Shuting Cynthia Mo; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2017-04-11       Impact factor: 3.876

3.  Reliable diagnosis of murine type 1 diabetes using a panel of autoantigens and "antigen surrogates" mounted onto a liquid array.

Authors:  Todd M Doran; Jumpei Morimoto; Scott Simanski; Patrick J McEnaney; Thomas Kodadek
Journal:  Mol Biosyst       Date:  2015-11

4.  Targeting Stereotyped B Cell Receptors from Chronic Lymphocytic Leukemia Patients with Synthetic Antigen Surrogates.

Authors:  Mohosin Sarkar; Yun Liu; Junpeng Qi; Haiyong Peng; Jumpei Morimoto; Christoph Rader; Nicholas Chiorazzi; Thomas Kodadek
Journal:  J Biol Chem       Date:  2016-02-05       Impact factor: 5.157

Review 5.  Chemical composition of DNA-encoded libraries, past present and future.

Authors:  Paige Dickson; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

6.  Screening one bead one compound libraries against serum using a flow cytometer: Determination of the minimum antibody concentration required for ligand discovery.

Authors:  Osayemwenre Erharuyi; Scott Simanski; Patrick J McEnaney; Thomas Kodadek
Journal:  Bioorg Med Chem Lett       Date:  2018-01-31       Impact factor: 2.823

7.  Towards vast libraries of scaffold-diverse, conformationally constrained oligomers.

Authors:  Thomas Kodadek; Patrick J McEnaney
Journal:  Chem Commun (Camb)       Date:  2016-03-21       Impact factor: 6.222

Review 8.  Chemical Tools To Monitor and Manipulate Adaptive Immune Responses.

Authors:  Todd M Doran; Mohosin Sarkar; Thomas Kodadek
Journal:  J Am Chem Soc       Date:  2016-05-03       Impact factor: 15.419

9.  High-throughput Identification of DNA-Encoded IgG Ligands that Distinguish Active and Latent Mycobacterium tuberculosis Infections.

Authors:  Kimberly R Mendes; Marie Lynne Malone; John Maina Ndungu; Irena Suponitsky-Kroyter; Valerie J Cavett; Patrick J McEnaney; Andrew B MacConnell; Todd M Doran; Katharina Ronacher; Kim Stanley; Ofelia Utset; Gerhard Walzl; Brian M Paegel; Thomas Kodadek
Journal:  ACS Chem Biol       Date:  2016-12-13       Impact factor: 5.100

10.  Structural characterization of a peptoid-inspired conformationally constrained oligomer (PICCO) bound to streptavidin.

Authors:  Patrick McEnaney; Madeline Balzarini; Hajeung Park; Thomas Kodadek
Journal:  Chem Commun (Camb)       Date:  2020-08-12       Impact factor: 6.222

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