Literature DB >> 25433070

Epitranscriptional regulation of cardiovascular development and disease.

Gerald W Dorn1, Scot J Matkovich.   

Abstract

Development, homeostasis and responses to stress in the heart all depend on appropriate control of mRNA expression programmes, which may be enacted at the level of DNA sequence, DNA accessibility and RNA-mediated control of mRNA output. Diverse mechanisms underlie promoter-driven transcription of coding mRNAs and their translation into protein, and the ways in which sequence alteration of DNA can make an impact on these processes have been studied for some time. The field of epigenetics explores changes in DNA structure that influence its accessibility by transcriptional machinery, and we are continuing to develop our understanding of how these processes modify cardiac RNA production. In this topical review, we do not focus on how DNA sequence and methylation, and histone interactions, may alter its accessibility, but rather on newly described mechanisms by which some transcribed RNAs may alter initial transcription or downstream processing of other RNAs, involving both short non-coding RNAs (microRNAs) and long non-coding RNAs (lncRNAs). Here we present examples of how these two classes of non-coding RNAs mediate widespread effects on cardiac transcription and protein output in processes for which we use the broad term 'epitranscriptional regulation' and that are complementary to the DNA methylation and histone modification events studied by classical epigenetics.
© 2014 The Authors. The Journal of Physiology © 2014 The Physiological Society.

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Year:  2014        PMID: 25433070      PMCID: PMC4405743          DOI: 10.1113/jphysiol.2014.283234

Source DB:  PubMed          Journal:  J Physiol        ISSN: 0022-3751            Impact factor:   5.182


  65 in total

Review 1.  Epigenetic mechanisms in cardiac development and disease.

Authors:  Marcus Vallaster; Caroline Dacwag Vallaster; Sean M Wu
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2012-01       Impact factor: 3.848

2.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

3.  Epitranscriptional orchestration of genetic reprogramming is an emergent property of stress-regulated cardiac microRNAs.

Authors:  Yuanxin Hu; Scot J Matkovich; Peter A Hecker; Yan Zhang; John R Edwards; Gerald W Dorn
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

Review 4.  Regulatory RNAs and paracrine networks in the heart.

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5.  Protooncogene induction and reprogramming of cardiac gene expression produced by pressure overload.

Authors:  S Izumo; B Nadal-Ginard; V Mahdavi
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

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7.  Peptide growth factors can provoke "fetal" contractile protein gene expression in rat cardiac myocytes.

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10.  Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs.

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Journal:  Eur Heart J       Date:  2014-04-30       Impact factor: 29.983

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Review 1.  Long noncoding RNAs in cardiac development and ageing.

Authors:  Yvan Devaux; Jennifer Zangrando; Blanche Schroen; Esther E Creemers; Thierry Pedrazzini; Ching-Pin Chang; Gerald W Dorn; Thomas Thum; Stephane Heymans
Journal:  Nat Rev Cardiol       Date:  2015-04-07       Impact factor: 32.419

2.  Transcriptome and proteome dynamics in the cardiovascular system.

Authors:  Thomas M Vondriska
Journal:  J Physiol       Date:  2015-04-15       Impact factor: 5.182

3.  Systematic Characterization of Long Noncoding RNAs Reveals the Contrasting Coordination of Cis- and Trans-Molecular Regulation in Human Fetal and Adult Hearts.

Authors:  Chunjiang He; Hanyang Hu; Kitchener D Wilson; Haodi Wu; Jing Feng; Siyu Xia; Jared Churko; Kun Qu; Howard Y Chang; Joseph C Wu
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4.  High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure.

Authors:  Manuel Rosa-Garrido; Douglas J Chapski; Anthony D Schmitt; Todd H Kimball; Elaheh Karbassi; Emma Monte; Enrique Balderas; Matteo Pellegrini; Tsai-Ting Shih; Elizabeth Soehalim; David Liem; Peipei Ping; Niels J Galjart; Shuxun Ren; Yibin Wang; Bing Ren; Thomas M Vondriska
Journal:  Circulation       Date:  2017-08-11       Impact factor: 29.690

5.  A regulatory variant in TBX2 promoter is related to the decreased susceptibility of congenital heart disease in the Han Chinese population.

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Journal:  Mol Genet Genomic Med       Date:  2018-12-07       Impact factor: 2.183

Review 6.  Targeting Epigenetics and Non-coding RNAs in Myocardial Infarction: From Mechanisms to Therapeutics.

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7.  Knockdown of lncRNA ENST00000609755.1 Confers Protection Against Early oxLDL-Induced Coronary Heart Disease.

Authors:  Yi Sun; Shuna Huang; Chunyu Wan; Qishuang Ruan; Xiaoxu Xie; Donghong Wei; Guobo Li; Shaowei Lin; Huangyuan Li; Siying Wu
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Review 8.  Curcumin, a Multifaceted Hormetic Agent, Mediates an Intricate Crosstalk between Mitochondrial Turnover, Autophagy, and Apoptosis.

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  8 in total

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