Literature DB >> 22194017

Epigenetic mechanisms in cardiac development and disease.

Marcus Vallaster1, Caroline Dacwag Vallaster, Sean M Wu.   

Abstract

During mammalian development, cardiac specification and ultimately lineage commitment to a specific cardiac cell type is accomplished by the action of specific transcription factors (TFs) and their meticulous control on an epigenetic level. In this review, we detail how cardiac-specific TFs function in concert with nucleosome remodeling and histone-modifying enzymes to regulate a diverse network of genes required for processes such as cell growth and proliferation, or epithelial to mesenchymal transition (EMT), for instance. We provide examples of how several cardiac TFs, such as Nkx2.5, WHSC1, Tbx5, and Tbx1, which are associated with developmental and congenital heart defects, are required for the recruitment of histone modifiers, such as Jarid2, p300, and Ash2l, and components of ATP-dependent remodeling enzymes like Brg1, Baf60c, and Baf180. Binding of these TFs to their respective sites at cardiac genes coincides with a distinct pattern of histone marks, indicating that the precise regulation of cardiac gene networks is orchestrated by interactions between TFs and epigenetic modifiers. Furthermore, we speculate that an epigenetic signature, comprised of TF occupancy, histone modifications, and overall chromatin organization, is an underlying mechanism that governs cardiac morphogenesis and disease.

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Year:  2012        PMID: 22194017      PMCID: PMC3244653          DOI: 10.1093/abbs/gmr090

Source DB:  PubMed          Journal:  Acta Biochim Biophys Sin (Shanghai)        ISSN: 1672-9145            Impact factor:   3.848


  102 in total

Review 1.  Nucleosome sliding: facts and fiction.

Authors:  Peter B Becker
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

2.  The clonal origin of myocardial cells in different regions of the embryonic mouse heart.

Authors:  Sigolène M Meilhac; Milan Esner; Robert G Kelly; Jean-François Nicolas; Margaret E Buckingham
Journal:  Dev Cell       Date:  2004-05       Impact factor: 12.270

3.  Hand2 function in second heart field progenitors is essential for cardiogenesis.

Authors:  Takatoshi Tsuchihashi; Jun Maeda; Chong H Shin; Kathryn N Ivey; Brian L Black; Eric N Olson; Hiroyuki Yamagishi; Deepak Srivastava
Journal:  Dev Biol       Date:  2010-12-23       Impact factor: 3.582

Review 4.  Nucleosome displacement in transcription.

Authors:  Jerry L Workman
Journal:  Genes Dev       Date:  2006-08-01       Impact factor: 11.361

Review 5.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 6.  Epigenetics in embryonic stem cells: regulation of pluripotency and differentiation.

Authors:  Stuart Atkinson; Lyle Armstrong
Journal:  Cell Tissue Res       Date:  2007-11-15       Impact factor: 5.249

Review 7.  The histone tails of the nucleosome.

Authors:  K Luger; T J Richmond
Journal:  Curr Opin Genet Dev       Date:  1998-04       Impact factor: 5.578

8.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

Review 9.  Chromatin remodeling in cardiovascular development and physiology.

Authors:  Pei Han; Calvin T Hang; Jin Yang; Ching-Pin Chang
Journal:  Circ Res       Date:  2011-02-04       Impact factor: 17.367

10.  Polybromo protein BAF180 functions in mammalian cardiac chamber maturation.

Authors:  Zhong Wang; Weiguo Zhai; James A Richardson; Eric N Olson; Juanito J Meneses; Meri T Firpo; Chulho Kang; William C Skarnes; Robert Tjian
Journal:  Genes Dev       Date:  2004-12-15       Impact factor: 11.361

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  28 in total

1.  Sensitivity to dioxin decreases as zebrafish mature.

Authors:  Kevin A Lanham; Richard E Peterson; Warren Heideman
Journal:  Toxicol Sci       Date:  2012-03-08       Impact factor: 4.849

2.  Risk factors of different congenital heart defects in Guangdong, China.

Authors:  Yanqiu Ou; Jinzhuang Mai; Jian Zhuang; Xiaoqing Liu; Yong Wu; Xiangmin Gao; Zhiqiang Nie; Yanji Qu; Jimei Chen; Christine Kielb; Ursula Lauper; Shao Lin
Journal:  Pediatr Res       Date:  2015-12-17       Impact factor: 3.756

Review 3.  Epitranscriptional regulation of cardiovascular development and disease.

Authors:  Gerald W Dorn; Scot J Matkovich
Journal:  J Physiol       Date:  2014-12-23       Impact factor: 5.182

Review 4.  Epigenetics of the failing heart.

Authors:  José Marín-García; Alexander T Akhmedov
Journal:  Heart Fail Rev       Date:  2015-07       Impact factor: 4.214

Review 5.  Epigenetic mechanisms underlying cardiac degeneration and regeneration.

Authors:  Pankaj Chaturvedi; Suresh C Tyagi
Journal:  Int J Cardiol       Date:  2014-02-20       Impact factor: 4.164

Review 6.  Transgenerational epigenetics: the role of maternal effects in cardiovascular development.

Authors:  Dao H Ho
Journal:  Integr Comp Biol       Date:  2014-05-09       Impact factor: 3.326

7.  SETD7 Drives Cardiac Lineage Commitment through Stage-Specific Transcriptional Activation.

Authors:  Jaecheol Lee; Ning-Yi Shao; David T Paik; Haodi Wu; Hongchao Guo; Vittavat Termglinchan; Jared M Churko; Youngkyun Kim; Tomoya Kitani; Ming-Tao Zhao; Yue Zhang; Kitchener D Wilson; Ioannis Karakikes; Michael P Snyder; Joseph C Wu
Journal:  Cell Stem Cell       Date:  2018-03-01       Impact factor: 24.633

Review 8.  Chromatin-remodeling complex specificity and embryonic vascular development.

Authors:  Carol D Curtis; Reema B Davis; Kyle G Ingram; Courtney T Griffin
Journal:  Cell Mol Life Sci       Date:  2012-05-23       Impact factor: 9.261

9.  Re-patterning of H3K27me3, H3K4me3 and DNA methylation during fibroblast conversion into induced cardiomyocytes.

Authors:  Ziqing Liu; Olivia Chen; Michael Zheng; Li Wang; Yang Zhou; Chaoying Yin; Jiandong Liu; Li Qian
Journal:  Stem Cell Res       Date:  2016-02-27       Impact factor: 2.020

10.  PBRM1 and BAP1 as novel targets for renal cell carcinoma.

Authors:  James Brugarolas
Journal:  Cancer J       Date:  2013 Jul-Aug       Impact factor: 3.360

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