Literature DB >> 25386110

Gate-Modulated Graphene Quantum Point Contact Device for DNA Sensing.

Anuj Girdhar, Chaitanya Sathe, Klaus Schulten, Jean-Pierre Leburton.   

Abstract

In this paper, we present a computational model to describe the electrical response of a constricted graphene nanoribbon (GNR) to biomolecules translocating through a nanopore. For this purpose, we use a self-consistent 3D Poisson equation solver coupled with an accurate three-orbital tight-binding model to assess the ability for a gate electrode to modulate both the carrier concentration as well as the conductance in the GNR. We also investigate the role of electrolytic screening on the sensitivity of the conductance to external charges and find that the gate electrode can either suppress or enhance the screening of biomolecular charges in the nanopore depending on the value of its potential. Translocating a double-stranded DNA molecule along the pore axis imparted a large change in the conductance at particular gate voltages, suggesting that such a device can be used to sense translocating biomolecules and can be actively tuned to maximize its sensitivity.

Entities:  

Keywords:  Device; Nanopore; QPC; Simulation

Year:  2014        PMID: 25386110      PMCID: PMC4224323          DOI: 10.1007/s10825-014-0596-6

Source DB:  PubMed          Journal:  J Comput Electron        ISSN: 1569-8025            Impact factor:   1.807


  24 in total

1.  Fabrication of solid-state nanopores with single-nanometre precision.

Authors:  A J Storm; J H Chen; X S Ling; H W Zandbergen; C Dekker
Journal:  Nat Mater       Date:  2003-08       Impact factor: 43.841

2.  Detection of nucleic acids with graphene nanopores: ab initio characterization of a novel sequencing device.

Authors:  Tammie Nelson; Bo Zhang; Oleg V Prezhdo
Journal:  Nano Lett       Date:  2010-09-08       Impact factor: 11.189

3.  DNA translocation through graphene nanopores.

Authors:  Grégory F Schneider; Stefan W Kowalczyk; Victor E Calado; Grégory Pandraud; Henny W Zandbergen; Lieven M K Vandersypen; Cees Dekker
Journal:  Nano Lett       Date:  2010-08-11       Impact factor: 11.189

4.  Current saturation in zero-bandgap, top-gated graphene field-effect transistors.

Authors:  Inanc Meric; Melinda Y Han; Andrea F Young; Barbaros Ozyilmaz; Philip Kim; Kenneth L Shepard
Journal:  Nat Nanotechnol       Date:  2008-09-21       Impact factor: 39.213

5.  Rapid sequencing of individual DNA molecules in graphene nanogaps.

Authors:  Henk W Ch Postma
Journal:  Nano Lett       Date:  2010-02-10       Impact factor: 11.189

6.  Computational investigation of DNA detection using graphene nanopores.

Authors:  Chaitanya Sathe; Xueqing Zou; Jean-Pierre Leburton; Klaus Schulten
Journal:  ACS Nano       Date:  2011-10-13       Impact factor: 15.881

7.  The influence of edge structure on the electronic properties of graphene quantum dots and nanoribbons.

Authors:  Kyle A Ritter; Joseph W Lyding
Journal:  Nat Mater       Date:  2009-02-15       Impact factor: 43.841

Review 8.  The potential and challenges of nanopore sequencing.

Authors:  Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

9.  Graphene quantum point contact transistor for DNA sensing.

Authors:  Anuj Girdhar; Chaitanya Sathe; Klaus Schulten; Jean-Pierre Leburton
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

10.  Electronic structures of porous nanocarbons.

Authors:  Artem Baskin; Petr Král
Journal:  Sci Rep       Date:  2011-07-13       Impact factor: 4.379

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  4 in total

1.  Electronic detection of dsDNA transition from helical to zipper conformation using graphene nanopores.

Authors:  Chaitanya Sathe; Anuj Girdhar; Jean-Pierre Leburton; Klaus Schulten
Journal:  Nanotechnology       Date:  2014-10-17       Impact factor: 3.874

2.  Detection and Mapping of DNA Methylation with 2D Material Nanopores.

Authors:  Hu Qiu; Aditya Sarathy; Klaus Schulten; Jean-Pierre Leburton
Journal:  NPJ 2D Mater Appl       Date:  2017-04-11

3.  Tunable graphene quantum point contact transistor for DNA detection and characterization.

Authors:  Anuj Girdhar; Chaitanya Sathe; Klaus Schulten; Jean-Pierre Leburton
Journal:  Nanotechnology       Date:  2015-03-13       Impact factor: 3.874

4.  Intrinsic Stepwise Translocation of Stretched ssDNA in Graphene Nanopores.

Authors:  Hu Qiu; Aditya Sarathy; Jean-Pierre Leburton; Klaus Schulten
Journal:  Nano Lett       Date:  2015-11-25       Impact factor: 11.189

  4 in total

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