Literature DB >> 25383668

Internal motions prime cIAP1 for rapid activation.

Aaron H Phillips1, Allyn J Schoeffler1, Tsutomu Matsui2, Thomas M Weiss2, John W Blankenship1, Kerry Zobel1, Anthony M Giannetti3, Erin C Dueber1, Wayne J Fairbrother1.   

Abstract

Cellular inhibitor of apoptosis 1 (cIAP1) is a ubiquitin ligase with critical roles in the control of programmed cell death and NF-κB signaling. Under normal conditions, the protein exists as an autoinhibited monomer, but proapoptotic signals lead to its dimerization, activation and proteasomal degradation. This view of cIAP1 as a binary switch has been informed by static structural studies that cannot access the protein's dynamics. Here, we use NMR spectroscopy to study micro- and millisecond motions of specific domain interfaces in human cIAP1 and use time-resolved small-angle X-ray scattering to observe the global conformational changes necessary for activation. Although motions within each interface of the 'closed' monomer are insufficient to activate cIAP1, they enable associations with catalytic partners and activation factors. We propose that these internal motions facilitate rapid peptide-induced opening and dimerization of cIAP1, which undergoes a dramatic spring-loaded structural transition.

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Year:  2014        PMID: 25383668     DOI: 10.1038/nsmb.2916

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  42 in total

1.  Global rigid body modeling of macromolecular complexes against small-angle scattering data.

Authors:  Maxim V Petoukhov; Dmitri I Svergun
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

2.  Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR.

Authors:  Ioannis Gelis; Alexandre M J J Bonvin; Dimitra Keramisanou; Marina Koukaki; Giorgos Gouridis; Spyridoula Karamanou; Anastassios Economou; Charalampos G Kalodimos
Journal:  Cell       Date:  2007-11-16       Impact factor: 41.582

3.  Structural characterization of flexible proteins using small-angle X-ray scattering.

Authors:  Pau Bernadó; Efstratios Mylonas; Maxim V Petoukhov; Martin Blackledge; Dmitri I Svergun
Journal:  J Am Chem Soc       Date:  2007-04-06       Impact factor: 15.419

4.  Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy.

Authors:  Vitali Tugarinov; Voula Kanelis; Lewis E Kay
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

5.  Structural basis for binding of Smac/DIABLO to the XIAP BIR3 domain.

Authors:  Z Liu; C Sun; E T Olejniczak; R P Meadows; S F Betz; T Oost; J Herrmann; J C Wu; S W Fesik
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

6.  Structural basis of IAP recognition by Smac/DIABLO.

Authors:  G Wu; J Chai; T L Suber; J W Wu; C Du; X Wang; Y Shi
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

7.  Identification of DIABLO, a mammalian protein that promotes apoptosis by binding to and antagonizing IAP proteins.

Authors:  A M Verhagen; P G Ekert; M Pakusch; J Silke; L M Connolly; G E Reid; R L Moritz; R J Simpson; D L Vaux
Journal:  Cell       Date:  2000-07-07       Impact factor: 41.582

8.  CARD-mediated autoinhibition of cIAP1's E3 ligase activity suppresses cell proliferation and migration.

Authors:  Juanita Lopez; Sidonie Wicky John; Tencho Tenev; Gilles J P Rautureau; Mark G Hinds; Floriana Francalanci; Rebecca Wilson; Meike Broemer; Massimo M Santoro; Catherine L Day; Pascal Meier
Journal:  Mol Cell       Date:  2011-05-05       Impact factor: 17.970

9.  Engineering ML-IAP to produce an extraordinarily potent caspase 9 inhibitor: implications for Smac-dependent anti-apoptotic activity of ML-IAP.

Authors:  Domagoj Vucic; Matthew C Franklin; Heidi J A Wallweber; Kanad Das; Brendan P Eckelman; Hwain Shin; Linda O Elliott; Saloumeh Kadkhodayan; Kurt Deshayes; Guy S Salvesen; Wayne J Fairbrother
Journal:  Biochem J       Date:  2005-01-01       Impact factor: 3.857

10.  IAP antagonists target cIAP1 to induce TNFalpha-dependent apoptosis.

Authors:  James E Vince; W Wei-Lynn Wong; Nufail Khan; Rebecca Feltham; Diep Chau; Afsar U Ahmed; Christopher A Benetatos; Srinivas K Chunduru; Stephen M Condon; Mark McKinlay; Robert Brink; Martin Leverkus; Vinay Tergaonkar; Pascal Schneider; Bernard A Callus; Frank Koentgen; David L Vaux; John Silke
Journal:  Cell       Date:  2007-11-16       Impact factor: 41.582

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  13 in total

Review 1.  Using protein motion to read, write, and erase ubiquitin signals.

Authors:  Aaron H Phillips; Jacob E Corn
Journal:  J Biol Chem       Date:  2015-09-09       Impact factor: 5.157

Review 2.  Structural insights into the catalysis and regulation of E3 ubiquitin ligases.

Authors:  Lori Buetow; Danny T Huang
Journal:  Nat Rev Mol Cell Biol       Date:  2016-08-03       Impact factor: 94.444

Review 3.  Inhibitor of apoptosis proteins as intracellular signaling intermediates.

Authors:  Andrew J Kocab; Colin S Duckett
Journal:  FEBS J       Date:  2015-11-04       Impact factor: 5.542

Review 4.  A dynamic look backward and forward.

Authors:  Arthur G Palmer
Journal:  J Magn Reson       Date:  2016-02-11       Impact factor: 2.229

5.  Dynamic activation of apoptosis: conformational ensembles of cIAP1 are linked to a spring-loaded mechanism.

Authors:  Michelle L Gill; R Andrew Byrd
Journal:  Nat Struct Mol Biol       Date:  2014-12       Impact factor: 15.369

6.  Geometric Approximation: A New Computational Approach To Characterize Protein Dynamics from NMR Adiabatic Relaxation Dispersion Experiments.

Authors:  Fa-An Chao; R Andrew Byrd
Journal:  J Am Chem Soc       Date:  2016-06-07       Impact factor: 15.419

7.  Protein Dynamics revealed by NMR Relaxation Methods.

Authors:  Fa-An Chao; R Andrew Byrd
Journal:  Emerg Top Life Sci       Date:  2020-04-18

8.  Resonant Soft X-Ray Scattering Provides Protein Structure with Chemical Specificity.

Authors:  Dan Ye; Thinh P Le; Brooke Kuei; Chenhui Zhu; Peter H Zwart; Cheng Wang; Enrique D Gomez; Esther W Gomez
Journal:  Structure       Date:  2018-09-13       Impact factor: 5.006

9.  NF-κB functions as a molecular link between tumor cells and Th1/Tc1 T cells in the tumor microenvironment to exert radiation-mediated tumor suppression.

Authors:  Priscilla S Simon; Kankana Bardhan; May R Chen; Amy V Paschall; Chunwan Lu; Roni J Bollag; Feng-Chong Kong; JianYue Jin; Feng-Ming Kong; Jennifer L Waller; Raphael E Pollock; Kebin Liu
Journal:  Oncotarget       Date:  2016-04-26

10.  Genomic insights into head and neck cancer.

Authors:  Tim N Beck; Erica A Golemis
Journal:  Cancers Head Neck       Date:  2016-06-03
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