| Literature DB >> 25362243 |
Robert Küffner1, Neta Zach2, Raquel Norel3, Johann Hawe4, David Schoenfeld5, Liuxia Wang6, Guang Li6, Lilly Fang7, Lester Mackey8, Orla Hardiman9, Merit Cudkowicz10, Alexander Sherman10, Gokhan Ertaylan11, Moritz Grosse-Wentrup12, Torsten Hothorn13, Jules van Ligtenberg14, Jakob H Macke15, Timm Meyer12, Bernhard Schölkopf12, Linh Tran16, Rubio Vaughan14, Gustavo Stolovitzky3, Melanie L Leitner17.
Abstract
Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease with substantial heterogeneity in its clinical presentation. This makes diagnosis and effective treatment difficult, so better tools for estimating disease progression are needed. Here, we report results from the DREAM-Phil Bowen ALS Prediction Prize4Life challenge. In this crowdsourcing competition, competitors developed algorithms for the prediction of disease progression of 1,822 ALS patients from standardized, anonymized phase 2/3 clinical trials. The two best algorithms outperformed a method designed by the challenge organizers as well as predictions by ALS clinicians. We estimate that using both winning algorithms in future trial designs could reduce the required number of patients by at least 20%. The DREAM-Phil Bowen ALS Prediction Prize4Life challenge also identified several potential nonstandard predictors of disease progression including uric acid, creatinine and surprisingly, blood pressure, shedding light on ALS pathobiology. This analysis reveals the potential of a crowdsourcing competition that uses clinical trial data for accelerating ALS research and development.Entities:
Mesh:
Year: 2014 PMID: 25362243 DOI: 10.1038/nbt.3051
Source DB: PubMed Journal: Nat Biotechnol ISSN: 1087-0156 Impact factor: 54.908