| Literature DB >> 30679616 |
Robert Kueffner1, Neta Zach2, Maya Bronfeld3, Raquel Norel4, Nazem Atassi5, Venkat Balagurusamy4, Barbara Di Camillo6, Adriano Chio7, Merit Cudkowicz5, Donna Dillenberger4, Javier Garcia-Garcia8, Orla Hardiman9, Bruce Hoff10, Joshua Knight4, Melanie L Leitner11, Guang Li12, Lara Mangravite10, Thea Norman10, Liuxia Wang13, Jinfeng Xiao14, Wen-Chieh Fang15, Jian Peng14, Chen Yang16, Huan-Jui Chang17, Gustavo Stolovitzky4.
Abstract
Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease where substantial heterogeneity in clinical presentation urgently requires a better stratification of patients for the development of drug trials and clinical care. In this study we explored stratification through a crowdsourcing approach, the DREAM Prize4Life ALS Stratification Challenge. Using data from >10,000 patients from ALS clinical trials and 1479 patients from community-based patient registers, more than 30 teams developed new approaches for machine learning and clustering, outperforming the best current predictions of disease outcome. We propose a new method to integrate and analyze patient clusters across methods, showing a clear pattern of consistent and clinically relevant sub-groups of patients that also enabled the reliable classification of new patients. Our analyses reveal novel insights in ALS and describe for the first time the potential of a crowdsourcing to uncover hidden patient sub-populations, and to accelerate disease understanding and therapeutic development.Entities:
Year: 2019 PMID: 30679616 PMCID: PMC6345935 DOI: 10.1038/s41598-018-36873-4
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379