Literature DB >> 25301989

Integrating Structural and Functional Imaging for Computer Assisted Detection of Prostate Cancer on Multi-Protocol In Vivo 3 Tesla MRI.

Satish Viswanath1, B Nicolas Bloch2, Mark Rosen3, Jonathan Chappelow1, Robert Toth1, Neil Rofsky2, Robert Lenkinski2, Elisabeth Genega2, Arjun Kalyanpur4, Anant Madabhushi1.   

Abstract

Screening and detection of prostate cancer (CaP) currently lacks an image-based protocol which is reflected in the high false negative rates currently associated with blinded sextant biopsies. Multi-protocol magnetic resonance imaging (MRI) offers high resolution functional and structural data about internal body structures (such as the prostate). In this paper we present a novel comprehensive computer-aided scheme for CaP detection from high resolution in vivo multi-protocol MRI by integrating functional and structural information obtained via dynamic-contrast enhanced (DCE) and T2-weighted (T2-w) MRI, respectively. Our scheme is fully-automated and comprises (a) prostate segmentation, (b) multimodal image registration, and (c) data representation and multi-classifier modules for information fusion. Following prostate boundary segmentation via an improved active shape model, the DCE/T2-w protocols and the T2-w/ex vivo histological prostatectomy specimens are brought into alignment via a deformable, multi-attribute registration scheme. T2-w/histology alignment allows for the mapping of true CaP extent onto the in vivo MRI, which is used for training and evaluation of a multi-protocol MRI CaP classifier. The meta-classifier used is a random forest constructed by bagging multiple decision tree classifiers, each trained individually on T2-w structural, textural and DCE functional attributes. 3-fold classifier cross validation was performed using a set of 18 images derived from 6 patient datasets on a per-pixel basis. Our results show that the results of CaP detection obtained from integration of T2-w structural textural data and DCE functional data (area under the ROC curve of 0.815) significantly outperforms detection based on either of the individual modalities (0.704 (T2-w) and 0.682 (DCE)). It was also found that a meta-classifier trained directly on integrated T2-w and DCE data (data-level integration) significantly outperformed a decision-level meta-classifier, constructed by combining the classifier outputs from the individual T2-w and DCE channels.

Entities:  

Keywords:  3 Tesla; CAD; DCE-MRI; T2-w MRI; bagging; data fusion; decision fusion; decision trees; multimodal integration; non-rigid registration; prostate cancer; random forests; segmentation; supervised learning

Year:  2009        PMID: 25301989      PMCID: PMC4188347          DOI: 10.1117/12.811899

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  14 in total

1.  Detection of prostate cancer by integration of line-scan diffusion, T2-mapping and T2-weighted magnetic resonance imaging; a multichannel statistical classifier.

Authors:  Ian Chan; William Wells; Robert V Mulkern; Steven Haker; Jianqing Zhang; Kelly H Zou; Stephan E Maier; Clare M C Tempany
Journal:  Med Phys       Date:  2003-09       Impact factor: 4.071

2.  New methods of MR image intensity standardization via generalized scale.

Authors:  Anant Madabhushi; Jayaram K Udupa
Journal:  Med Phys       Date:  2006-09       Impact factor: 4.071

3.  Multi-attribute non-initializing texture reconstruction based active shape model (MANTRA).

Authors:  Robert Toth; Jonathan Chappelow; Mark Rosen; Sona Pungavkar; Arjun Kalyanpur; Anant Madabhushi
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

4.  Localization of prostate cancer using 3T MRI: comparison of T2-weighted and dynamic contrast-enhanced imaging.

Authors:  Chan Kyo Kim; Byung Kwan Park; Bohyun Kim
Journal:  J Comput Assist Tomogr       Date:  2006 Jan-Feb       Impact factor: 1.826

5.  Automated detection of prostatic adenocarcinoma from high-resolution ex vivo MRI.

Authors:  Anant Madabhushi; Michael D Feldman; Dimitris N Metaxas; John Tomaszeweski; Deborah Chute
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

6.  Multimodal cranial neuronavigation: direct integration of functional magnetic resonance imaging and positron emission tomography data: technical note.

Authors:  V Braun; S Dempf; R Tomczak; A Wunderlich; R Weller; H P Richter
Journal:  Neurosurgery       Date:  2001-05       Impact factor: 4.654

7.  Prostate cancer: accurate determination of extracapsular extension with high-spatial-resolution dynamic contrast-enhanced and T2-weighted MR imaging--initial results.

Authors:  B Nicolas Bloch; Edna Furman-Haran; Thomas H Helbich; Robert E Lenkinski; Hadassa Degani; Christian Kratzik; Martin Susani; Andrea Haitel; Silvia Jaromi; Long Ngo; Neil M Rofsky
Journal:  Radiology       Date:  2007-08-23       Impact factor: 11.105

8.  Computerized analysis of prostate lesions in the peripheral zone using dynamic contrast enhanced MRI.

Authors:  Pieter C Vos; Thomas Hambrock; Christina A Hulsbergen-van de Kaa; Jurgen J Fütterer; Jelle O Barentsz; Henkjan J Huisman
Journal:  Med Phys       Date:  2008-03       Impact factor: 4.071

9.  Three-dimensional registration of prostate images from histology and ultrasound.

Authors:  Lawrence S Taylor; Brian C Porter; Gyongyi Nadasdy; P Anthony di Sant'Agnese; David Pasternack; Zhe Wu; Raymond B Baggs; Deborah J Rubens; Kevin J Parker
Journal:  Ultrasound Med Biol       Date:  2004-02       Impact factor: 2.998

10.  Evaluation of T2-weighted and dynamic contrast-enhanced MRI in localizing prostate cancer before repeat biopsy.

Authors:  Alexandre Ben Cheikh; Nicolas Girouin; Marc Colombel; Jean-Marie Maréchal; Albert Gelet; Alvine Bissery; Muriel Rabilloud; Denis Lyonnet; Olivier Rouvière
Journal:  Eur Radiol       Date:  2008-10-17       Impact factor: 5.315

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  11 in total

1.  Simultaneous Segmentation of Prostatic Zones Using Active Appearance Models With Multiple Coupled Levelsets.

Authors:  Robert Toth; Justin Ribault; John Gentile; Dan Sperling; Anant Madabhushi
Journal:  Comput Vis Image Underst       Date:  2013-09-01       Impact factor: 3.876

2.  Computer-aided diagnosis of prostate cancer with MRI.

Authors:  Baowei Fei
Journal:  Curr Opin Biomed Eng       Date:  2017-09

3.  Elastic registration of multimodal prostate MRI and histology via multiattribute combined mutual information.

Authors:  Jonathan Chappelow; B Nicolas Bloch; Neil Rofsky; Elizabeth Genega; Robert Lenkinski; William DeWolf; Anant Madabhushi
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

4.  Prostate multimodality image registration based on B-splines and quadrature local energy.

Authors:  Jhimli Mitra; Robert Martí; Arnau Oliver; Xavier Lladó; Soumya Ghose; Joan C Vilanova; Fabrice Meriaudeau
Journal:  Int J Comput Assist Radiol Surg       Date:  2011-06-26       Impact factor: 2.924

5.  Shape-based motion correction in dynamic contrast-enhanced MRI for quantitative assessment of renal function.

Authors:  Wenyang Liu; Kyunghyun Sung; Dan Ruan
Journal:  Med Phys       Date:  2014-12       Impact factor: 4.071

Review 6.  Computer-aided Detection of Prostate Cancer with MRI: Technology and Applications.

Authors:  Lizhi Liu; Zhiqiang Tian; Zhenfeng Zhang; Baowei Fei
Journal:  Acad Radiol       Date:  2016-04-25       Impact factor: 3.173

7.  Enhanced Multi-Protocol Analysis via Intelligent Supervised Embedding (EMPrAvISE): Detecting Prostate Cancer on Multi-Parametric MRI.

Authors:  Satish Viswanath; B Nicolas Bloch; Jonathan Chappelow; Pratik Patel; Neil Rofsky; Robert Lenkinski; Elisabeth Genega; Anant Madabhushi
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-04

8.  Automated detection of retinal exudates and drusen in ultra-widefield fundus images based on deep learning.

Authors:  Zhongwen Li; Chong Guo; Danyao Nie; Duoru Lin; Tingxin Cui; Yi Zhu; Chuan Chen; Lanqin Zhao; Xulin Zhang; Meimei Dongye; Dongni Wang; Fabao Xu; Chenjin Jin; Ping Zhang; Yu Han; Pisong Yan; Haotian Lin
Journal:  Eye (Lond)       Date:  2021-08-03       Impact factor: 4.456

9.  Co-Registration of ex vivo Surgical Histopathology and in vivo T2 weighted MRI of the Prostate via multi-scale spectral embedding representation.

Authors:  Lin Li; Shivani Pahwa; Gregory Penzias; Mirabela Rusu; Jay Gollamudi; Satish Viswanath; Anant Madabhushi
Journal:  Sci Rep       Date:  2017-08-18       Impact factor: 4.379

10.  Gleason Probability Maps: A Radiomics Tool for Mapping Prostate Cancer Likelihood in MRI Space.

Authors:  Sean D McGarry; John D Bukowy; Kenneth A Iczkowski; Jackson G Unteriner; Petar Duvnjak; Allison K Lowman; Kenneth Jacobsohn; Mark Hohenwalter; Michael O Griffin; Alex W Barrington; Halle E Foss; Tucker Keuter; Sarah L Hurrell; William A See; Marja T Nevalainen; Anjishnu Banerjee; Peter S LaViolette
Journal:  Tomography       Date:  2019-03
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