Literature DB >> 25294649

Applying machine learning to facilitate autism diagnostics: pitfalls and promises.

Daniel Bone1, Matthew S Goodwin, Matthew P Black, Chi-Chun Lee, Kartik Audhkhasi, Shrikanth Narayanan.   

Abstract

Machine learning has immense potential to enhance diagnostic and intervention research in the behavioral sciences, and may be especially useful in investigations involving the highly prevalent and heterogeneous syndrome of autism spectrum disorder. However, use of machine learning in the absence of clinical domain expertise can be tenuous and lead to misinformed conclusions. To illustrate this concern, the current paper critically evaluates and attempts to reproduce results from two studies (Wall et al. in Transl Psychiatry 2(4):e100, 2012a; PloS One 7(8), 2012b) that claim to drastically reduce time to diagnose autism using machine learning. Our failure to generate comparable findings to those reported by Wall and colleagues using larger and more balanced data underscores several conceptual and methodological problems associated with these studies. We conclude with proposed best-practices when using machine learning in autism research, and highlight some especially promising areas for collaborative work at the intersection of computational and behavioral science.

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Mesh:

Year:  2015        PMID: 25294649      PMCID: PMC4390409          DOI: 10.1007/s10803-014-2268-6

Source DB:  PubMed          Journal:  J Autism Dev Disord        ISSN: 0162-3257


  19 in total

1.  The autism genetic resource exchange: a resource for the study of autism and related neuropsychiatric conditions.

Authors:  D H Geschwind; J Sowinski; C Lord; P Iversen; J Shestack; P Jones; L Ducat; S J Spence
Journal:  Am J Hum Genet       Date:  2001-08       Impact factor: 11.025

2.  A study on several machine-learning methods for classification of malignant and benign clustered microcalcifications.

Authors:  Liyang Wei; Yongyi Yang; Robert M Nishikawa; Yulei Jiang
Journal:  IEEE Trans Med Imaging       Date:  2005-03       Impact factor: 10.048

3.  Novel clustering of items from the Autism Diagnostic Interview-Revised to define phenotypes within autism spectrum disorders.

Authors:  Valerie W Hu; Mara E Steinberg
Journal:  Autism Res       Date:  2009-04       Impact factor: 5.216

4.  The autism diagnostic observation schedule-generic: a standard measure of social and communication deficits associated with the spectrum of autism.

Authors:  C Lord; S Risi; L Lambrecht; E H Cook; B L Leventhal; P C DiLavore; A Pickles; M Rutter
Journal:  J Autism Dev Disord       Date:  2000-06

5.  Rapid quantitative assessment of autistic social impairment by classroom teachers.

Authors:  John N Constantino; Patricia D Lavesser; Yi Zhang; Anna M Abbacchi; Teddi Gray; Richard D Todd
Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2007-12       Impact factor: 8.829

6.  Autism Diagnostic Interview-Revised: a revised version of a diagnostic interview for caregivers of individuals with possible pervasive developmental disorders.

Authors:  C Lord; M Rutter; A Le Couteur
Journal:  J Autism Dev Disord       Date:  1994-10

7.  Behavioral Signal Processing: Deriving Human Behavioral Informatics From Speech and Language: Computational techniques are presented to analyze and model expressed and perceived human behavior-variedly characterized as typical, atypical, distressed, and disordered-from speech and language cues and their applications in health, commerce, education, and beyond.

Authors:  Shrikanth Narayanan; Panayiotis G Georgiou
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2013-02-07       Impact factor: 10.961

Review 8.  The genetic and neurobiologic compass points toward common signaling dysfunctions in autism spectrum disorders.

Authors:  Pat Levitt; Daniel B Campbell
Journal:  J Clin Invest       Date:  2009-04-01       Impact factor: 14.808

9.  Use of artificial intelligence to shorten the behavioral diagnosis of autism.

Authors:  Dennis P Wall; Rebecca Dally; Rhiannon Luyster; Jae-Yoon Jung; Todd F Deluca
Journal:  PLoS One       Date:  2012-08-27       Impact factor: 3.240

10.  Use of machine learning to shorten observation-based screening and diagnosis of autism.

Authors:  D P Wall; J Kosmicki; T F Deluca; E Harstad; V A Fusaro
Journal:  Transl Psychiatry       Date:  2012-04-10       Impact factor: 6.222

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  30 in total

1.  Analysis of engagement behavior in children during dyadic interactions using prosodic cues.

Authors:  Rahul Gupta; Daniel Bone; Sungbok Lee; Shrikanth Narayanan
Journal:  Comput Speech Lang       Date:  2015-10-23       Impact factor: 1.899

Review 2.  Computational Analysis and Simulation of Empathic Behaviors: a Survey of Empathy Modeling with Behavioral Signal Processing Framework.

Authors:  Bo Xiao; Zac E Imel; Panayiotis Georgiou; David C Atkins; Shrikanth S Narayanan
Journal:  Curr Psychiatry Rep       Date:  2016-05       Impact factor: 5.285

Review 3.  Data harnessing to nurture the human mind for a tailored approach to the child.

Authors:  Saheli Chatterjee Misra; Kaushik Mukhopadhyay
Journal:  Pediatr Res       Date:  2022-09-30       Impact factor: 3.953

4.  Use of machine learning to improve autism screening and diagnostic instruments: effectiveness, efficiency, and multi-instrument fusion.

Authors:  Daniel Bone; Somer L Bishop; Matthew P Black; Matthew S Goodwin; Catherine Lord; Shrikanth S Narayanan
Journal:  J Child Psychol Psychiatry       Date:  2016-04-19       Impact factor: 8.982

5.  Introduction to Technologies in the Daily Lives of Individuals with Autism.

Authors:  Frederick Shic; Matthew Goodwin
Journal:  J Autism Dev Disord       Date:  2015-12

Review 6.  Data-Driven Diagnostics and the Potential of Mobile Artificial Intelligence for Digital Therapeutic Phenotyping in Computational Psychiatry.

Authors:  Peter Washington; Natalie Park; Parishkrita Srivastava; Catalin Voss; Aaron Kline; Maya Varma; Qandeel Tariq; Haik Kalantarian; Jessey Schwartz; Ritik Patnaik; Brianna Chrisman; Nathaniel Stockham; Kelley Paskov; Nick Haber; Dennis P Wall
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2019-12-13

7.  Empirical assessment of bias in machine learning diagnostic test accuracy studies.

Authors:  Ryan J Crowley; Yuan Jin Tan; John P A Ioannidis
Journal:  J Am Med Inform Assoc       Date:  2020-07-01       Impact factor: 4.497

8.  Robust diagnostic classification via Q-learning.

Authors:  Victor Ardulov; Victor R Martinez; Krishna Somandepalli; Shuting Zheng; Emma Salzman; Catherine Lord; Somer Bishop; Shrikanth Narayanan
Journal:  Sci Rep       Date:  2021-06-03       Impact factor: 4.379

9.  Machine Learning based Psychology: Advocating for A Data-Driven Approach.

Authors:  Jorge I Vélez
Journal:  Int J Psychol Res (Medellin)       Date:  2021 Jan-Jun

10.  A Comprehensive Machine Learning Framework for the Exact Prediction of the Age of Onset in Familial and Sporadic Alzheimer's Disease.

Authors:  Jorge I Vélez; Luiggi A Samper; Mauricio Arcos-Holzinger; Lady G Espinosa; Mario A Isaza-Ruget; Francisco Lopera; Mauricio Arcos-Burgos
Journal:  Diagnostics (Basel)       Date:  2021-05-17
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