Literature DB >> 25285195

Computational modelling of the inflammatory response in trauma, sepsis and wound healing: implications for modelling resilience.

Yoram Vodovotz1.   

Abstract

Resilience refers to the ability to recover from illness or adversity. At the cell, tissue, organ and whole-organism levels, the response to perturbations such as infections and injury involves the acute inflammatory response, which in turn is connected to and controlled by changes in physiology across all organ systems. When coordinated properly, inflammation can lead to the clearance of infection and healing of damaged tissues. However, when either overly or insufficiently robust, inflammation can drive further cell stress, tissue damage, organ dysfunction and death through a feed-forward process of inflammation → damage → inflammation. To address this complexity, we have obtained extensive datasets regarding the dynamics of inflammation in cells, animals and patients, and created data-driven and mechanistic computational simulations of inflammation and its recursive effects on tissue, organ and whole-organism (patho)physiology. Through this approach, we have discerned key regulatory mechanisms, recapitulated in silico key features of clinical trials for acute inflammation and captured diverse, patient-specific outcomes. These insights may allow for the determination of individual-specific tolerances to illness and adversity, thereby defining the role of inflammation in resilience.

Entities:  

Keywords:  computational modelling; inflammatory response; resilience; sepsis; trauma; wound healing

Year:  2014        PMID: 25285195      PMCID: PMC4142014          DOI: 10.1098/rsfs.2014.0004

Source DB:  PubMed          Journal:  Interface Focus        ISSN: 2042-8898            Impact factor:   3.906


  69 in total

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Authors:  Claudio E Lagoa; John Bartels; Arie Baratt; George Tseng; Gilles Clermont; Mitchell P Fink; Timothy R Billiar; Yoram Vodovotz
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3.  In silico experiments of existing and hypothetical cytokine-directed clinical trials using agent-based modeling.

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4.  A reduced mathematical model of the acute inflammatory response II. Capturing scenarios of repeated endotoxin administration.

Authors:  Judy Day; Jonathan Rubin; Yoram Vodovotz; Carson C Chow; Angela Reynolds; Gilles Clermont
Journal:  J Theor Biol       Date:  2006-04-17       Impact factor: 2.691

5.  A reduced mathematical model of the acute inflammatory response: I. Derivation of model and analysis of anti-inflammation.

Authors:  Angela Reynolds; Jonathan Rubin; Gilles Clermont; Judy Day; Yoram Vodovotz; G Bard Ermentrout
Journal:  J Theor Biol       Date:  2006-04-03       Impact factor: 2.691

6.  Network news: innovations in 21st century systems biology.

Authors:  Adam P Arkin; David V Schaffer
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

7.  Modeling the interactions of bacteria and Toll-like receptor-mediated inflammation in necrotizing enterocolitis.

Authors:  Julia Arciero; G Bard Ermentrout; Richard Siggers; Amin Afrazi; David Hackam; Yoram Vodovotz; Jonathan Rubin
Journal:  J Theor Biol       Date:  2012-12-10       Impact factor: 2.691

8.  A physiological model for autonomic heart rate regulation in human endotoxemia.

Authors:  Panagiota T Foteinou; Steve E Calvano; Stephen F Lowry; Ioannis P Androulakis
Journal:  Shock       Date:  2011-03       Impact factor: 3.454

9.  A mathematical simulation of the inflammatory response to anthrax infection.

Authors:  Rukmini Kumar; Carson C Chow; John D Bartels; Gilles Clermont; Yoram Vodovotz
Journal:  Shock       Date:  2008-01       Impact factor: 3.454

Review 10.  Mechanistic simulations of inflammation: current state and future prospects.

Authors:  Yoram Vodovotz; Gregory Constantine; Jonathan Rubin; Marie Csete; Eberhard O Voit; Gary An
Journal:  Math Biosci       Date:  2008-08-26       Impact factor: 2.144

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4.  Control of Cholesterol Metabolism Using a Systems Approach.

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Journal:  Biology (Basel)       Date:  2022-03-11
  4 in total

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