Literature DB >> 25228495

Rationale and Applications of Survival Tree and Survival Ensemble Methods.

Yan Zhou1, John J McArdle.   

Abstract

Classification and Regression Trees (CART), and their successors-bagging and random forests, are statistical learning tools that are receiving increasing attention. However, due to characteristics of censored data collection, standard CART algorithms are not immediately transferable to the context of survival analysis. Questions about the occurrence and timing of events arise throughout psychological and behavioral sciences, especially in longitudinal studies. The prediction power and other key features of tree-based methods are promising in studies where an event occurrence is the outcome of interest. This article reviews existing tree algorithms designed specifically for censored responses as well as recently developed survival ensemble methods, and introduces available computer software. Through simulations and a practical example, merits and limitations of these methods are discussed. Suggestions are provided for practical use.

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Mesh:

Year:  2014        PMID: 25228495      PMCID: PMC4409541          DOI: 10.1007/s11336-014-9413-1

Source DB:  PubMed          Journal:  Psychometrika        ISSN: 0033-3123            Impact factor:   2.500


  15 in total

1.  Survival ensembles.

Authors:  Torsten Hothorn; Peter Bühlmann; Sandrine Dudoit; Annette Molinaro; Mark J van der Laan
Journal:  Biostatistics       Date:  2005-12-12       Impact factor: 5.899

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Journal:  Biometrics       Date:  1992-06       Impact factor: 2.571

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Authors:  M Schemper; J Stare
Journal:  Stat Med       Date:  1996-10-15       Impact factor: 2.373

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Authors:  O Intrator; C Kooperberg
Journal:  Stat Methods Med Res       Date:  1995-09       Impact factor: 3.021

6.  Tree-structured survival analysis.

Authors:  L Gordon; R A Olshen
Journal:  Cancer Treat Rep       Date:  1985-10

7.  Evaluating the yield of medical tests.

Authors:  F E Harrell; R M Califf; D B Pryor; K L Lee; R A Rosati
Journal:  JAMA       Date:  1982-05-14       Impact factor: 56.272

8.  Evaluation of survival data and two new rank order statistics arising in its consideration.

Authors:  N Mantel
Journal:  Cancer Chemother Rep       Date:  1966-03

9.  Ten-year stability of remission in private alcohol and drug outpatient treatment: non-problem users versus abstainers.

Authors:  Jennifer R Mertens; Andrea H Kline-Simon; Kevin L Delucchi; Charles Moore; Constance M Weisner
Journal:  Drug Alcohol Depend       Date:  2012-04-26       Impact factor: 4.492

10.  An introduction to recursive partitioning: rationale, application, and characteristics of classification and regression trees, bagging, and random forests.

Authors:  Carolin Strobl; James Malley; Gerhard Tutz
Journal:  Psychol Methods       Date:  2009-12
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  11 in total

1.  Predictive Score for Identifying Survival and Recurrence Risk Profiles in Patients Undergoing Ventricular Tachycardia Ablation: The I-VT Score.

Authors:  Pasquale Vergara; Wendy S Tzou; Roderick Tung; Chiara Brombin; Alessandro Nonis; Marmar Vaseghi; David S Frankel; Luigi Di Biase; Usha Tedrow; Nilesh Mathuria; Shiro Nakahara; Venkat Tholakanahalli; T Jared Bunch; J Peter Weiss; Timm Dickfeld; Dhanunjaya Lakireddy; J David Burkhardt; Pasquale Santangeli; David Callans; Andrea Natale; Francis Marchlinski; William G Stevenson; Kalyanam Shivkumar; William H Sauer; Paolo Della Bella
Journal:  Circ Arrhythm Electrophysiol       Date:  2018-12

Review 2.  Leveraging RSF and PET images for prognosis of multiple myeloma at diagnosis.

Authors:  Ludivine Morvan; Thomas Carlier; Bastien Jamet; Clément Bailly; Caroline Bodet-Milin; Philippe Moreau; Françoise Kraeber-Bodéré; Diana Mateus
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-06-29       Impact factor: 2.924

3.  A Selective Review on Random Survival Forests for High Dimensional Data.

Authors:  Hong Wang; Gang Li
Journal:  Quant Biosci       Date:  2017

4.  Interval censored recursive forests.

Authors:  Hunyong Cho; Nicholas P Jewell; Michael R Kosorok
Journal:  J Comput Graph Stat       Date:  2021-11-17       Impact factor: 1.884

5.  Application of survival tree analysis for exploration of potential interactions between predictors of incident chronic kidney disease: a 15-year follow-up study.

Authors:  Azra Ramezankhani; Maryam Tohidi; Fereidoun Azizi; Farzad Hadaegh
Journal:  J Transl Med       Date:  2017-11-28       Impact factor: 5.531

6.  Learning rule sets from survival data.

Authors:  Łukasz Wróbel; Adam Gudyś; Marek Sikora
Journal:  BMC Bioinformatics       Date:  2017-05-30       Impact factor: 3.169

7.  A new look at risk patterns related to coronary heart disease incidence using survival tree analysis: 12 Years Longitudinal Study.

Authors:  Azra Ramezankhani; Farideh Bagherzadeh-Khiabani; Davood Khalili; Fereidoun Azizi; Farzad Hadaegh
Journal:  Sci Rep       Date:  2017-06-12       Impact factor: 4.379

8.  Acute and one year outcome of premature ventricular contraction ablation guided by contact force and automated pacemapping software.

Authors:  Lucio Capulzini; Pasquale Vergara; Giacomo Mugnai; Francesca Salghetti; Juan Pablo Abugattas; Said El Bouchaibi; Saverio Iacopino; Juan Sieira; Hugo Enriquez Coutiño; Erwin Ströker; Pedro Brugada; Gianbattista Chierchia; Carlo de Asmundis
Journal:  J Arrhythm       Date:  2019-05-14

9.  Enrichment Benefits of Risk Algorithms for Pulmonary Arterial Hypertension Clinical Trials.

Authors:  Jacqueline V Scott; Christine E Garnett; Manreet K Kanwar; Norman L Stockbridge; Raymond L Benza
Journal:  Am J Respir Crit Care Med       Date:  2021-03-15       Impact factor: 21.405

10.  Multicenter study on caries risk assessment in adults using survival Classification and Regression Trees.

Authors:  Masumi Arino; Ataru Ito; Shozo Fujiki; Seiichi Sugiyama; Mikako Hayashi
Journal:  Sci Rep       Date:  2016-07-06       Impact factor: 4.379

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