Literature DB >> 30740388

A Selective Review on Random Survival Forests for High Dimensional Data.

Hong Wang1, Gang Li2.   

Abstract

Over the past decades, there has been considerable interest in applying statistical machine learning methods in survival analysis. Ensemble based approaches, especially random survival forests, have been developed in a variety of contexts due to their high precision and non-parametric nature. This article aims to provide a timely review on recent developments and applications of random survival forests for time-to-event data with high dimensional covariates. This selective review begins with an introduction to the random survival forest framework, followed by a survey of recent developments on splitting criteria, variable selection, and other advanced topics of random survival forests for time-to-event data in high dimensional settings. We also discuss potential research directions for future research.

Entities:  

Keywords:  Censoring; Random survival forest; Survival ensemble; Survival tree; Time-to-event data

Year:  2017        PMID: 30740388      PMCID: PMC6364686          DOI: 10.22283/qbs.2017.36.2.85

Source DB:  PubMed          Journal:  Quant Biosci        ISSN: 2288-1344


  35 in total

1.  Bagging survival trees.

Authors:  Torsten Hothorn; Berthold Lausen; Axel Benner; Martin Radespiel-Tröger
Journal:  Stat Med       Date:  2004-01-15       Impact factor: 2.373

2.  A GENERALIZED WILCOXON TEST FOR COMPARING ARBITRARILY SINGLY-CENSORED SAMPLES.

Authors:  E A GEHAN
Journal:  Biometrika       Date:  1965-06       Impact factor: 2.445

3.  Survival model predictive accuracy and ROC curves.

Authors:  Patrick J Heagerty; Yingye Zheng
Journal:  Biometrics       Date:  2005-03       Impact factor: 2.571

4.  Regression modeling of competing risks data based on pseudovalues of the cumulative incidence function.

Authors:  John P Klein; Per Kragh Andersen
Journal:  Biometrics       Date:  2005-03       Impact factor: 2.571

5.  Iterative partial least squares with right-censored data analysis: a comparison to other dimension reduction techniques.

Authors:  Jie Huang; David Harrington
Journal:  Biometrics       Date:  2005-03       Impact factor: 2.571

6.  Penalized Cox regression analysis in the high-dimensional and low-sample size settings, with applications to microarray gene expression data.

Authors:  Jiang Gui; Hongzhe Li
Journal:  Bioinformatics       Date:  2005-04-06       Impact factor: 6.937

7.  Survival ensembles.

Authors:  Torsten Hothorn; Peter Bühlmann; Sandrine Dudoit; Annette Molinaro; Mark J van der Laan
Journal:  Biostatistics       Date:  2005-12-12       Impact factor: 5.899

8.  Partial least squares proportional hazard regression for application to DNA microarray survival data.

Authors:  Danh V Nguyen; David M Rocke
Journal:  Bioinformatics       Date:  2002-12       Impact factor: 6.937

9.  Bias in random forest variable importance measures: illustrations, sources and a solution.

Authors:  Carolin Strobl; Anne-Laure Boulesteix; Achim Zeileis; Torsten Hothorn
Journal:  BMC Bioinformatics       Date:  2007-01-25       Impact factor: 3.169

10.  Allowing for mandatory covariates in boosting estimation of sparse high-dimensional survival models.

Authors:  Harald Binder; Martin Schumacher
Journal:  BMC Bioinformatics       Date:  2008-01-10       Impact factor: 3.169

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  18 in total

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Authors:  Julianne Duhazé; Signe Hässler; Delphine Bachelet; Aude Gleizes; Salima Hacein-Bey-Abina; Matthieu Allez; Florian Deisenhammer; Anna Fogdell-Hahn; Xavier Mariette; Marc Pallardy; Philippe Broët
Journal:  Front Immunol       Date:  2020-04-07       Impact factor: 7.561

5.  Metabolomic and transcriptomic profiling reveals the alteration of energy metabolism in oyster larvae during initial shell formation and under experimental ocean acidification.

Authors:  Zhaoqun Liu; Yukun Zhang; Zhi Zhou; Yanan Zong; Yan Zheng; Chang Liu; Ning Kong; Qiang Gao; Lingling Wang; Linsheng Song
Journal:  Sci Rep       Date:  2020-04-09       Impact factor: 4.379

6.  Magnetic resonance imaging features of tumor and lymph node to predict clinical outcome in node-positive cervical cancer: a retrospective analysis.

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Journal:  Radiat Oncol       Date:  2020-04-20       Impact factor: 3.481

7.  A Machine Learning-Based Model to Predict Survival After Transarterial Chemoembolization for BCLC Stage B Hepatocellular Carcinoma.

Authors:  Huapeng Lin; Lingfeng Zeng; Jing Yang; Wei Hu; Ying Zhu
Journal:  Front Oncol       Date:  2021-03-02       Impact factor: 6.244

8.  Explainable machine learning can outperform Cox regression predictions and provide insights in breast cancer survival.

Authors:  Arturo Moncada-Torres; Marissa C van Maaren; Mathijs P Hendriks; Sabine Siesling; Gijs Geleijnse
Journal:  Sci Rep       Date:  2021-03-26       Impact factor: 4.379

9.  Random survival forest to predict transplant-eligible newly diagnosed multiple myeloma outcome including FDG-PET radiomics: a combined analysis of two independent prospective European trials.

Authors:  Bastien Jamet; Ludivine Morvan; Diana Mateus; Thomas Carlier; Cristina Nanni; Anne-Victoire Michaud; Clément Bailly; Stéphane Chauvie; Philippe Moreau; Cyrille Touzeau; Elena Zamagni; Caroline Bodet-Milin; Françoise Kraeber-Bodéré
Journal:  Eur J Nucl Med Mol Imaging       Date:  2020-10-02       Impact factor: 9.236

10.  Editorial: Immunogenicity of Proteins Used as Therapeutics.

Authors:  Zuben E Sauna; Susan M Richards; Bernard Maillere; Elizabeth C Jury; Amy S Rosenberg
Journal:  Front Immunol       Date:  2020-10-29       Impact factor: 7.561

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