Literature DB >> 16344280

Survival ensembles.

Torsten Hothorn1, Peter Bühlmann, Sandrine Dudoit, Annette Molinaro, Mark J van der Laan.   

Abstract

We propose a unified and flexible framework for ensemble learning in the presence of censoring. For right-censored data, we introduce a random forest algorithm and a generic gradient boosting algorithm for the construction of prognostic and diagnostic models. The methodology is utilized for predicting the survival time of patients suffering from acute myeloid leukemia based on clinical and genetic covariates. Furthermore, we compare the diagnostic capabilities of the proposed censored data random forest and boosting methods, applied to the recurrence-free survival time of node-positive breast cancer patients, with previously published findings.

Entities:  

Mesh:

Year:  2005        PMID: 16344280     DOI: 10.1093/biostatistics/kxj011

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  118 in total

1.  Empiric neurocognitive performance profile discovery and interpretation in HIV infection.

Authors:  Daniela Gomez; Christopher Power; M John Gill; Noshin Koenig; Roberto Vega; Esther Fujiwara
Journal:  J Neurovirol       Date:  2018-12-05       Impact factor: 2.643

2.  Biological validation of increased schizophrenia risk with NRG1, ERBB4, and AKT1 epistasis via functional neuroimaging in healthy controls.

Authors:  Kristin K Nicodemus; Amanda J Law; Eugenia Radulescu; Augustin Luna; Bhaskar Kolachana; Radhakrishna Vakkalanka; Dan Rujescu; Ina Giegling; Richard E Straub; Kate McGee; Bert Gold; Michael Dean; Pierandrea Muglia; Joseph H Callicott; Hao-Yang Tan; Daniel R Weinberger
Journal:  Arch Gen Psychiatry       Date:  2010-10

3.  Effect of reader experience on variability, evaluation time and accuracy of coronary plaque detection with computed tomography coronary angiography.

Authors:  Stefan C Saur; Hatem Alkadhi; Paul Stolzmann; Stephan Baumüller; Sebastian Leschka; Hans Scheffel; Lotus Desbiolles; Thomas J Fuchs; Gábor Székely; Philippe C Cattin
Journal:  Eur Radiol       Date:  2010-01-30       Impact factor: 5.315

4.  Buckley-James boosting for survival analysis with high-dimensional biomarker data.

Authors:  Zhu Wang; C Y Wang
Journal:  Stat Appl Genet Mol Biol       Date:  2010-06-08

5.  Bayesian ensemble methods for survival prediction in gene expression data.

Authors:  Vinicius Bonato; Veerabhadran Baladandayuthapani; Bradley M Broom; Erik P Sulman; Kenneth D Aldape; Kim-Anh Do
Journal:  Bioinformatics       Date:  2010-12-08       Impact factor: 6.937

6.  Bayesian Weibull tree models for survival analysis of clinico-genomic data.

Authors:  Jennifer Clarke; Mike West
Journal:  Stat Methodol       Date:  2008

Review 7.  Application of machine learning algorithms for clinical predictive modeling: a data-mining approach in SCT.

Authors:  R Shouval; O Bondi; H Mishan; A Shimoni; R Unger; A Nagler
Journal:  Bone Marrow Transplant       Date:  2013-10-07       Impact factor: 5.483

8.  Survival ensembles by the sum of pairwise differences with application to lung cancer microarray studies.

Authors:  Brent A Johnson; Qi Long
Journal:  Ann Appl Stat       Date:  2011-06-01       Impact factor: 2.083

9.  Survival prediction models for estimating the benefit of post-operative radiation therapy for gallbladder cancer and lung cancer.

Authors:  Jayashree Kalpathy-Cramer; William Hersh; Jong Song Kim; Charles R Thomas; Samuel J Wang
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

10.  Breaking Down the Bilingual Cost in Speech Production.

Authors:  Jasmin Sadat; Clara D Martin; James S Magnuson; François-Xavier Alario; Albert Costa
Journal:  Cogn Sci       Date:  2015-10-25
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