Literature DB >> 25195012

Solid-to-fluid DNA transition inside HSV-1 capsid close to the temperature of infection.

Udom Sae-Ueng1, Dong Li1, Xiaobing Zuo2, Jamie B Huffman3, Fred L Homa3, Donald Rau4, Alex Evilevitch5.   

Abstract

DNA in the human Herpes simplex virus type 1 (HSV-1) capsid is packaged to a tight density. This leads to tens of atmospheres of internal pressure responsible for the delivery of the herpes genome into the cell nucleus. In this study we show that, despite its liquid crystalline state inside the capsid, the DNA is fluid-like, which facilitates its ejection into the cell nucleus during infection. We found that the sliding friction between closely packaged DNA strands, caused by interstrand repulsive interactions, is reduced by the ionic environment of epithelial cells and neurons susceptible to herpes infection. However, variations in the ionic conditions corresponding to neuronal activity can restrict DNA mobility in the capsid, making it more solid-like. This can inhibit intranuclear DNA release and interfere with viral replication. In addition, the temperature of the human host (37 °C) induces a disordering transition of the encapsidated herpes genome, which reduces interstrand interactions and provides genome mobility required for infection.

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Year:  2014        PMID: 25195012      PMCID: PMC6528806          DOI: 10.1038/nchembio.1628

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  45 in total

1.  Capsid assembly and DNA packaging in herpes simplex virus.

Authors: 
Journal:  Rev Med Virol       Date:  1997-07       Impact factor: 6.989

2.  Bacteriophage capsids: tough nanoshells with complex elastic properties.

Authors:  I L Ivanovska; P J de Pablo; B Ibarra; G Sgalari; F C MacKintosh; J L Carrascosa; C F Schmidt; G J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-07       Impact factor: 11.205

3.  DNA ejection from bacteriophage T5: analysis of the kinetics and energetics.

Authors:  Marta de Frutos; Lucienne Letellier; Eric Raspaud
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

Review 4.  Effects of salts on internal DNA pressure and mechanical properties of phage capsids.

Authors:  Alex Evilevitch; Wouter H Roos; Irena L Ivanovska; Meerim Jeembaeva; Bengt Jönsson; Gijs J L Wuite
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

5.  Compartmentalization of spermine and spermidine in the herpes simplex virion.

Authors:  W Gibson; B Roizman
Journal:  Proc Natl Acad Sci U S A       Date:  1971-11       Impact factor: 11.205

6.  DNA arrangement in isometric phage heads.

Authors:  W C Earnshaw; S C Harrison
Journal:  Nature       Date:  1977-08-18       Impact factor: 49.962

Review 7.  Herpes simplex virus infections.

Authors:  R J Whitley; B Roizman
Journal:  Lancet       Date:  2001-05-12       Impact factor: 79.321

8.  Herpes virus genome, the pressure is on.

Authors:  David W Bauer; Jamie B Huffman; Fred L Homa; Alex Evilevitch
Journal:  J Am Chem Soc       Date:  2013-07-23       Impact factor: 15.419

Review 9.  Sequestered end products and enzyme regulation: the case of ornithine decarboxylase.

Authors:  R H Davis; D R Morris; P Coffino
Journal:  Microbiol Rev       Date:  1992-06

Review 10.  Resistance of herpesviruses to antiviral drugs: clinical impacts and molecular mechanisms.

Authors:  Christian Gilbert; Julie Bestman-Smith; Guy Boivin
Journal:  Drug Resist Updat       Date:  2002-04       Impact factor: 18.500

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  14 in total

1.  Probing the Link among Genomic Cargo, Contact Mechanics, and Nanoindentation in Recombinant Adeno-Associated Virus 2.

Authors:  Cheng Zeng; Sven Moller-Tank; Aravind Asokan; Bogdan Dragnea
Journal:  J Phys Chem B       Date:  2017-02-14       Impact factor: 2.991

2.  Influence of Microscopic Interactions on the Flexible Mechanical Properties of Viral DNA.

Authors:  Cheng-Yin Zhang; Neng-Hui Zhang
Journal:  Biophys J       Date:  2018-08-04       Impact factor: 4.033

3.  Exploring the Balance between DNA Pressure and Capsid Stability in Herpesviruses and Phages.

Authors:  D W Bauer; D Li; J Huffman; F L Homa; K Wilson; J C Leavitt; S R Casjens; J Baines; A Evilevitch
Journal:  J Virol       Date:  2015-07-01       Impact factor: 5.103

4.  Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure.

Authors:  Natalia Martín-González; Mercedes Hernando-Pérez; Gabriela N Condezo; Marta Pérez-Illana; Antonio Šiber; David Reguera; Philomena Ostapchuk; Patrick Hearing; Carmen San Martín; Pedro J de Pablo
Journal:  Nucleic Acids Res       Date:  2019-09-26       Impact factor: 16.971

5.  Ionic switch controls the DNA state in phage λ.

Authors:  Dong Li; Ting Liu; Xiaobing Zuo; Tao Li; Xiangyun Qiu; Alex Evilevitch
Journal:  Nucleic Acids Res       Date:  2015-06-19       Impact factor: 16.971

6.  Temperature and pH dependence of DNA ejection from archaeal lemon-shaped virus His1.

Authors:  K J Hanhijärvi; G Ziedaite; E Hæggström; D H Bamford
Journal:  Eur Biophys J       Date:  2016-01-28       Impact factor: 1.733

7.  Direct characterization of the native structure and mechanics of cyanobacterial carboxysomes.

Authors:  Matthew Faulkner; Jorge Rodriguez-Ramos; Gregory F Dykes; Siân V Owen; Selene Casella; Deborah M Simpson; Robert J Beynon; Lu-Ning Liu
Journal:  Nanoscale       Date:  2017-08-03       Impact factor: 7.790

8.  Spatiotemporal dynamics of HSV genome nuclear entry and compaction state transitions using bioorthogonal chemistry and super-resolution microscopy.

Authors:  Eiki Sekine; Nora Schmidt; David Gaboriau; Peter O'Hare
Journal:  PLoS Pathog       Date:  2017-11-09       Impact factor: 6.823

9.  C22 podovirus infectivity is associated with intermediate stiffness.

Authors:  Udom Sae-Ueng; Anjana Bhunchoth; Namthip Phironrit; Alongkot Treetong; Chaweewan Sapcharoenkun; Orawan Chatchawankanphanich; Ubolsree Leartsakulpanich; Penchit Chitnumsub
Journal:  Sci Rep       Date:  2020-07-28       Impact factor: 4.379

Review 10.  Role of ND10 nuclear bodies in the chromatin repression of HSV-1.

Authors:  Haidong Gu; Yi Zheng
Journal:  Virol J       Date:  2016-04-05       Impact factor: 4.099

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