Literature DB >> 25155957

Efficient, complete deletion of synaptic proteins using CRISPR.

Salvatore Incontro1, Cedric S Asensio2, Robert H Edwards2, Roger A Nicoll3.   

Abstract

One of the most powerful ways to test the function of a protein is to characterize the consequences of its deletion. In the past, this has involved inactivation of the gene by homologous recombination either in the germline or later through conditional deletion. RNA interference (RNAi) provides an alternative way to knock down proteins, but both of these approaches have their limitations. Recently, the CRISPR/Cas9 system has suggested another way to selectively inactivate genes. We have now tested this system in postmitotic neurons by targeting two well-characterized synaptic proteins, the obligatory GluN1 subunit of the NMDA receptor and the GluA2 subunit of the AMPA receptor. Expression of CRISPR/Cas9 in hippocampal slice cultures completely eliminated NMDA receptor and GluA2 function. CRISPR/Cas9 thus provides a powerful tool to study the function of synaptic proteins.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25155957      PMCID: PMC4195490          DOI: 10.1016/j.neuron.2014.07.043

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  34 in total

1.  Driving AMPA receptors into synapses by LTP and CaMKII: requirement for GluR1 and PDZ domain interaction.

Authors:  Y Hayashi; S H Shi; J A Esteban; A Piccini; J C Poncer; R Malinow
Journal:  Science       Date:  2000-03-24       Impact factor: 47.728

Review 2.  RNA interference.

Authors:  Gregory J Hannon
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

3.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

4.  Regulation of spine morphology and spine density by NMDA receptor signaling in vivo.

Authors:  Sila K Ultanir; Ji-Eun Kim; Benjamin J Hall; Thomas Deerinck; Mark Ellisman; Anirvan Ghosh
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-28       Impact factor: 11.205

5.  Retraction of synapses and dendritic spines induced by off-target effects of RNA interference.

Authors:  Veronica A Alvarez; Dennis A Ridenour; Bernardo L Sabatini
Journal:  J Neurosci       Date:  2006-07-26       Impact factor: 6.167

6.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

7.  Characterization of genomic deletion efficiency mediated by clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 nuclease system in mammalian cells.

Authors:  Matthew C Canver; Daniel E Bauer; Abhishek Dass; Yvette Y Yien; Jacky Chung; Takeshi Masuda; Takahiro Maeda; Barry H Paw; Stuart H Orkin
Journal:  J Biol Chem       Date:  2014-06-06       Impact factor: 5.157

Review 8.  Molecular mechanisms controlling calcium entry through AMPA-type glutamate receptor channels.

Authors:  P Jonas; N Burnashev
Journal:  Neuron       Date:  1995-11       Impact factor: 17.173

Review 9.  Endonucleases: new tools to edit the mouse genome.

Authors:  Tobias Wijshake; Darren J Baker; Bart van de Sluis
Journal:  Biochim Biophys Acta       Date:  2014-04-30

10.  RNA-guided gene activation by CRISPR-Cas9-based transcription factors.

Authors:  Pablo Perez-Pinera; D Dewran Kocak; Christopher M Vockley; Andrew F Adler; Ami M Kabadi; Lauren R Polstein; Pratiksha I Thakore; Katherine A Glass; David G Ousterout; Kam W Leong; Farshid Guilak; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

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  56 in total

1.  Tracking and transforming neocortical progenitors by CRISPR/Cas9 gene targeting and piggyBac transposase lineage labeling.

Authors:  Fuyi Chen; Joel Rosiene; Alicia Che; Albert Becker; Joseph LoTurco
Journal:  Development       Date:  2015-09-23       Impact factor: 6.868

Review 2.  Glutamatergic Signaling in the Central Nervous System: Ionotropic and Metabotropic Receptors in Concert.

Authors:  Andreas Reiner; Joshua Levitz
Journal:  Neuron       Date:  2018-06-27       Impact factor: 17.173

3.  Genome Editing Reveals Glioblastoma Addiction to MicroRNA-10b.

Authors:  Rachid El Fatimy; Shruthi Subramanian; Erik J Uhlmann; Anna M Krichevsky
Journal:  Mol Ther       Date:  2017-02-01       Impact factor: 11.454

4.  CRISPR-Cas9-mediated genome editing in one blastomere of two-cell embryos reveals a novel Tet3 function in regulating neocortical development.

Authors:  Lingbo Wang; Min-Yin Li; Chao Qu; Wan-Ying Miao; Qi Yin; Jiaoyang Liao; Hua-Teng Cao; Min Huang; Kai Wang; Erwei Zuo; Guangdun Peng; Shu-Xin Zhang; Guodong Chen; Qing Li; Ke Tang; Qian Yu; Zhoujie Li; Catherine Cl Wong; Guoliang Xu; Naihe Jing; Xiang Yu; Jinsong Li
Journal:  Cell Res       Date:  2017-04-21       Impact factor: 25.617

Review 5.  In vivo cell type-specific CRISPR gene editing for sleep research.

Authors:  Hiroshi Yamaguchi; Luis de Lecea
Journal:  J Neurosci Methods       Date:  2018-11-12       Impact factor: 2.390

6.  In Vivo Single-Cell Genotyping of Mouse Cortical Neurons Transfected with CRISPR/Cas9.

Authors:  André Steinecke; Nobuhiro Kurabayashi; Yasufumi Hayano; Yugo Ishino; Hiroki Taniguchi
Journal:  Cell Rep       Date:  2019-07-09       Impact factor: 9.423

7.  An E3-ligase-based method for ablating inhibitory synapses.

Authors:  Garrett G Gross; Christoph Straub; Jimena Perez-Sanchez; William P Dempsey; Jason A Junge; Richard W Roberts; Le A Trinh; Scott E Fraser; Yves De Koninck; Paul De Koninck; Bernardo L Sabatini; Don B Arnold
Journal:  Nat Methods       Date:  2016-06-06       Impact factor: 28.547

8.  Identification of an elaborate complex mediating postsynaptic inhibition.

Authors:  Akiyoshi Uezu; Daniel J Kanak; Tyler W A Bradshaw; Erik J Soderblom; Christina M Catavero; Alain C Burette; Richard J Weinberg; Scott H Soderling
Journal:  Science       Date:  2016-09-09       Impact factor: 47.728

Review 9.  Applications of CRISPR-Cas systems in neuroscience.

Authors:  Matthias Heidenreich; Feng Zhang
Journal:  Nat Rev Neurosci       Date:  2015-12-10       Impact factor: 34.870

10.  Surgical extraction of human dorsal root ganglia from organ donors and preparation of primary sensory neuron cultures.

Authors:  Manouela V Valtcheva; Bryan A Copits; Steve Davidson; Tayler D Sheahan; Melanie Y Pullen; Jordan G McCall; Krikor Dikranian; Robert W Gereau
Journal:  Nat Protoc       Date:  2016-09-08       Impact factor: 13.491

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