Literature DB >> 25149170

Utility of next generation sequencing in clinical primary immunodeficiencies.

Nikita Raje1, Sarah Soden, Douglas Swanson, Christina E Ciaccio, Stephen F Kingsmore, Darrell L Dinwiddie.   

Abstract

Primary immunodeficiencies (PIDs) are a group of genetically heterogeneous disorders that present with very similar symptoms, complicating definitive diagnosis. More than 240 genes have hitherto been associated with PIDs, of which more than 30 have been identified in the last 3 years. Next generation sequencing (NGS) of genomes or exomes of informative families has played a central role in the discovery of novel PID genes. Furthermore, NGS has the potential to transform clinical molecular testing for established PIDs, allowing all PID differential diagnoses to be tested at once, leading to increased diagnostic yield, while decreasing both the time and cost of obtaining a molecular diagnosis. Given that treatment of PID varies by disease gene, early achievement of a molecular diagnosis is likely to enhance treatment decisions and improve patient outcomes.

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Year:  2014        PMID: 25149170      PMCID: PMC4582650          DOI: 10.1007/s11882-014-0468-y

Source DB:  PubMed          Journal:  Curr Allergy Asthma Rep        ISSN: 1529-7322            Impact factor:   4.919


  86 in total

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5.  Point-counterpoint. Patient autonomy and incidental findings in clinical genomics.

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8.  Inactivating mutations in an SH2 domain-encoding gene in X-linked lymphoproliferative syndrome.

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9.  Agammaglobulinemia and absent B lineage cells in a patient lacking the p85α subunit of PI3K.

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Authors:  B Shillitoe; C Bangs; D Guzman; A R Gennery; H J Longhurst; M Slatter; D M Edgar; M Thomas; A Worth; A Huissoon; P D Arkwright; S Jolles; H Bourne; H Alachkar; S Savic; D S Kumararatne; S Patel; H Baxendale; S Noorani; P F K Yong; C Waruiru; V Pavaladurai; P Kelleher; R Herriot; J Bernatonienne; M Bhole; C Steele; G Hayman; A Richter; M Gompels; C Chopra; T Garcez; M Buckland
Journal:  Clin Exp Immunol       Date:  2018-06       Impact factor: 4.330

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Journal:  Immunogenetics       Date:  2017-06-09       Impact factor: 2.846

Review 3.  Review: Diagnosing Common Variable Immunodeficiency Disorder in the Era of Genome Sequencing.

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Journal:  Clin Rev Allergy Immunol       Date:  2018-04       Impact factor: 8.667

4.  Utility of targeted next generation sequencing for inborn errors of immunity at a tertiary care centre in North India.

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5.  Primary immunodeficiency diseases: Genomic approaches delineate heterogeneous Mendelian disorders.

Authors:  Asbjørg Stray-Pedersen; Hanne Sørmo Sorte; Pubudu Samarakoon; Tomasz Gambin; Ivan K Chinn; Zeynep H Coban Akdemir; Hans Christian Erichsen; Lisa R Forbes; Shen Gu; Bo Yuan; Shalini N Jhangiani; Donna M Muzny; Olaug Kristin Rødningen; Ying Sheng; Sarah K Nicholas; Lenora M Noroski; Filiz O Seeborg; Carla M Davis; Debra L Canter; Emily M Mace; Timothy J Vece; Carl E Allen; Harshal A Abhyankar; Philip M Boone; Christine R Beck; Wojciech Wiszniewski; Børre Fevang; Pål Aukrust; Geir E Tjønnfjord; Tobias Gedde-Dahl; Henrik Hjorth-Hansen; Ingunn Dybedal; Ingvild Nordøy; Silje F Jørgensen; Tore G Abrahamsen; Torstein Øverland; Anne Grete Bechensteen; Vegard Skogen; Liv T N Osnes; Mari Ann Kulseth; Trine E Prescott; Cecilie F Rustad; Ketil R Heimdal; John W Belmont; Nicholas L Rider; Javier Chinen; Tram N Cao; Eric A Smith; Maria Soledad Caldirola; Liliana Bezrodnik; Saul Oswaldo Lugo Reyes; Francisco J Espinosa Rosales; Nina Denisse Guerrero-Cursaru; Luis Alberto Pedroza; Cecilia M Poli; Jose L Franco; Claudia M Trujillo Vargas; Juan Carlos Aldave Becerra; Nicola Wright; Thomas B Issekutz; Andrew C Issekutz; Jordan Abbott; Jason W Caldwell; Diana K Bayer; Alice Y Chan; Alessandro Aiuti; Caterina Cancrini; Eva Holmberg; Christina West; Magnus Burstedt; Ender Karaca; Gözde Yesil; Hasibe Artac; Yavuz Bayram; Mehmed Musa Atik; Mohammad K Eldomery; Mohammad S Ehlayel; Stephen Jolles; Berit Flatø; Alison A Bertuch; I Celine Hanson; Victor W Zhang; Lee-Jun Wong; Jianhong Hu; Magdalena Walkiewicz; Yaping Yang; Christine M Eng; Eric Boerwinkle; Richard A Gibbs; William T Shearer; Robert Lyle; Jordan S Orange; James R Lupski
Journal:  J Allergy Clin Immunol       Date:  2016-07-16       Impact factor: 10.793

Review 6.  Primary Immunodeficiencies: Diseases of Children and Adults - A Review.

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7.  Utilization of genomic sequencing for population screening of immunodeficiencies in the newborn.

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Review 8.  Exome and genome sequencing for inborn errors of immunity.

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9.  Next-generation sequencing for identifying genetic mutations in adults with bronchiectasis.

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Journal:  J Thorac Dis       Date:  2018-05       Impact factor: 2.895

10.  A Novel Non-Coding Variant in DCLRE1C Results in Deregulated Splicing and Induces SCID Through the Generation of a Truncated ARTEMIS Protein That Fails to Support V(D)J Recombination and DNA Damage Repair.

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Journal:  Front Immunol       Date:  2021-06-17       Impact factor: 7.561

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