Literature DB >> 25144452

Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast.

Junjie Yao1, Daria M Shcherbakova2, Chiye Li1, Arie Krumholz1, Ramon A Lorca3, Erin Reinl3, Sarah K England3, Vladislav V Verkhusha2, Lihong V Wang1.   

Abstract

Confocal microscopy with optical sectioning has revolutionized biological studies by providing sharper images than conventional optical microscopy. Here, we introduce a fluorescence imaging method with enhanced resolution and imaging contrast, which can be implemented using a commercial confocal microscope setup. This approach, called the reversibly switchable photo-imprint microscopy (rsPIM), is based on the switching dynamics of reversibly switchable fluorophores. When the fluorophores are switched from the bright (ON) state to the dark (OFF) state, their switching rate carries the information about the local excitation light intensity. In rsPIM, a polynomial function is used to fit the fluorescence signal decay during the transition. The extracted high-order coefficient highlights the signal contribution from the center of the excitation volume, and thus sharpens the resolution in all dimensions. In particular, out-of-focus signals are greatly blocked for large targets, and thus the image contrast is considerably enhanced. Notably, since the fluorophores can be cycled between the ON and OFF states, the whole imaging process can be repeated. RsPIM imaging with enhanced image contrast was demonstrated in both fixed and live cells using a reversibly switchable synthetic dye and a genetically encoded red fluorescent protein. Since rsPIM does not require the modification of commercial microscope systems, it may provide a simple and cost-effective solution for subdiffraction imaging of live cells.

Mesh:

Year:  2014        PMID: 25144452      PMCID: PMC4140226          DOI: 10.1117/1.JBO.19.8.086018

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  30 in total

1.  Widely accessible method for superresolution fluorescence imaging of living systems.

Authors:  Peter Dedecker; Gary C H Mo; Thomas Dertinger; Jin Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

2.  Optical lock-in detection imaging microscopy for contrast-enhanced imaging in living cells.

Authors:  Gerard Marriott; Shu Mao; Tomoyo Sakata; Jing Ran; David K Jackson; Chutima Petchprayoon; Timothy J Gomez; Erica Warp; Orapim Tulyathan; Holly L Aaron; Ehud Y Isacoff; Yuling Yan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-12       Impact factor: 11.205

3.  Optical sectioning by wide-field photobleaching imprinting microscopy.

Authors:  Chiye Li; Liang Gao; Yan Liu; Lihong V Wang
Journal:  Appl Phys Lett       Date:  2013-10-29       Impact factor: 3.791

4.  Optical saturation as a versatile tool to enhance resolution in confocal microscopy.

Authors:  Jana Humpolícková; Ales Benda; Jörg Enderlein
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

5.  A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications.

Authors:  Hao Chang; Mingshu Zhang; Wei Ji; Juanjuan Chen; Yongdeng Zhang; Bei Liu; Jingze Lu; Junlong Zhang; Pingyong Xu; Tao Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-28       Impact factor: 11.205

6.  Red fluorescent protein with reversibly photoswitchable absorbance for photochromic FRET.

Authors:  Fedor V Subach; Lijuan Zhang; Theodorus W J Gadella; Nadya G Gurskaya; Konstantin A Lukyanov; Vladislav V Verkhusha
Journal:  Chem Biol       Date:  2010-07-30

7.  Reversible single-molecule photoswitching in the GFP-like fluorescent protein Dronpa.

Authors:  Satoshi Habuchi; Ryoko Ando; Peter Dedecker; Wendy Verheijen; Hideaki Mizuno; Atsushi Miyawaki; Johan Hofkens
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

Review 8.  Photoacoustic tomography: fundamentals, advances and prospects.

Authors:  Junjie Yao; Lihong V Wang
Journal:  Contrast Media Mol Imaging       Date:  2011 Sep-Oct       Impact factor: 3.161

Review 9.  Red fluorescent proteins: chromophore formation and cellular applications.

Authors:  Atsushi Miyawaki; Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Struct Biol       Date:  2012-09-20       Impact factor: 6.809

10.  Evaluation of fluorophores for optimal performance in localization-based super-resolution imaging.

Authors:  Graham T Dempsey; Joshua C Vaughan; Kok Hao Chen; Mark Bates; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2011-11-06       Impact factor: 28.547

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  3 in total

1.  Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.

Authors:  Kanuj Mishra; Juan Pablo Fuenzalida-Werner; Francesca Pennacchietti; Robert Janowski; Andriy Chmyrov; Yuanhui Huang; Christian Zakian; Uwe Klemm; Ilaria Testa; Dierk Niessing; Vasilis Ntziachristos; Andre C Stiel
Journal:  Nat Biotechnol       Date:  2021-11-29       Impact factor: 54.908

2.  Two-photon-like microscopy with orders-of-magnitude lower illumination intensity via two-step fluorescence.

Authors:  Maria Ingaramo; Andrew G York; Eric J Andrade; Kristin Rainey; George H Patterson
Journal:  Nat Commun       Date:  2015-09-03       Impact factor: 14.919

3.  Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe.

Authors:  Junjie Yao; Andrii A Kaberniuk; Lei Li; Daria M Shcherbakova; Ruiying Zhang; Lidai Wang; Guo Li; Vladislav V Verkhusha; Lihong V Wang
Journal:  Nat Methods       Date:  2015-11-09       Impact factor: 28.547

  3 in total

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