Literature DB >> 25143216

Template-directed covalent conjugation of DNA to native antibodies, transferrin and other metal-binding proteins.

Christian B Rosen1, Anne L B Kodal1, Jesper S Nielsen2, David H Schaffert2, Carsten Scavenius3, Anders H Okholm2, Niels V Voigt4, Jan J Enghild3, Jørgen Kjems2, Thomas Tørring4, Kurt V Gothelf4.   

Abstract

DNA-protein conjugates are important in bioanalytical chemistry, molecular diagnostics and bionanotechnology, as the DNA provides a unique handle to identify, functionalize or otherwise manipulate proteins. To maintain protein activity, conjugation of a single DNA handle to a specific location on the protein is often needed. However, preparing such high-quality site-specific conjugates often requires genetically engineered proteins, which is a laborious and technically challenging approach. Here we demonstrate a simpler method to create site-selective DNA-protein conjugates. Using a guiding DNA strand modified with a metal-binding functionality, we directed a second DNA strand to the vicinity of a metal-binding site of His6-tagged or wild-type metal-binding proteins, such as serotransferrin, where it subsequently reacted with lysine residues at that site. This method, DNA-templated protein conjugation, facilitates the production of site-selective protein conjugates, and also conjugation to IgG1 antibodies via a histidine cluster in the constant domain.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25143216     DOI: 10.1038/nchem.2003

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  38 in total

1.  Sequence-specific detection of individual DNA strands using engineered nanopores.

Authors:  S Howorka; S Cheley; H Bayley
Journal:  Nat Biotechnol       Date:  2001-07       Impact factor: 54.908

Review 2.  DNA-templated organic synthesis: nature's strategy for controlling chemical reactivity applied to synthetic molecules.

Authors:  Xiaoyu Li; David R Liu
Journal:  Angew Chem Int Ed Engl       Date:  2004-09-20       Impact factor: 15.336

3.  An engineered protein tag for multiprotein labeling in living cells.

Authors:  Arnaud Gautier; Alexandre Juillerat; Christian Heinis; Ivan Reis Corrêa; Maik Kindermann; Florent Beaufils; Kai Johnsson
Journal:  Chem Biol       Date:  2008-02

Review 4.  Semisynthetic DNA-protein conjugates for biosensing and nanofabrication.

Authors:  Christof M Niemeyer
Journal:  Angew Chem Int Ed Engl       Date:  2010-02-08       Impact factor: 15.336

5.  Surface topography of histidine residues: a facile probe by immobilized metal ion affinity chromatography.

Authors:  E S Hemdan; Y J Zhao; E Sulkowski; J Porath
Journal:  Proc Natl Acad Sci U S A       Date:  1989-03       Impact factor: 11.205

6.  Aptamer-based affinity labeling of proteins.

Authors:  Jan L Vinkenborg; Günter Mayer; Michael Famulok
Journal:  Angew Chem Int Ed Engl       Date:  2012-08-02       Impact factor: 15.336

7.  Maturing antibody-drug conjugate pipeline hits 30.

Authors:  Asher Mullard
Journal:  Nat Rev Drug Discov       Date:  2013-05       Impact factor: 84.694

8.  Recruiting cytotoxic T cells to folate-receptor-positive cancer cells.

Authors:  Sumith A Kularatne; Vishal Deshmukh; Marco Gymnopoulos; Sandra L Biroc; Jinming Xia; Shaila Srinagesh; Ying Sun; Ning Zou; Mark Shimazu; Jason Pinkstaff; Semsi Ensari; Nick Knudsen; Anthony Manibusan; Jun Axup; Chanhyuk Kim; Vaughn Smider; Tsotne Javahishvili; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2013-09-25       Impact factor: 15.336

9.  Generation of a hybrid sequence-specific single-stranded deoxyribonuclease.

Authors:  D R Corey; P G Schultz
Journal:  Science       Date:  1987-12-04       Impact factor: 47.728

10.  Autonomous molecular cascades for evaluation of cell surfaces.

Authors:  Maria Rudchenko; Steven Taylor; Payal Pallavi; Alesia Dechkovskaia; Safana Khan; Vincent P Butler; Sergei Rudchenko; Milan N Stojanovic
Journal:  Nat Nanotechnol       Date:  2013-07-28       Impact factor: 39.213

View more
  33 in total

1.  Assembly of multienzyme complexes on DNA nanostructures.

Authors:  Jinglin Fu; Yuhe Renee Yang; Soma Dhakal; Zhao Zhao; Minghui Liu; Ting Zhang; Nils G Walter; Hao Yan
Journal:  Nat Protoc       Date:  2016-10-20       Impact factor: 13.491

Review 2.  Nucleic Acid-Barcoding Technologies: Converting DNA Sequencing into a Broad-Spectrum Molecular Counter.

Authors:  Glen Liszczak; Tom W Muir
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-06       Impact factor: 15.336

3.  A Concise, Modular Antibody-Oligonucleotide Conjugation Strategy Based on Disuccinimidyl Ester Activation Chemistry.

Authors:  Gang Li; Raymond E Moellering
Journal:  Chembiochem       Date:  2019-05-03       Impact factor: 3.164

4.  Recognition-then-Reaction Enables Site-Selective Bioconjugation to Proteins on Live-Cell Surfaces.

Authors:  Cheng Cui; Hui Zhang; Ruowen Wang; Sena Cansiz; Xiaoshu Pan; Shuo Wan; Weijia Hou; Long Li; Meiwan Chen; Yuan Liu; Xigao Chen; Qiaoling Liu; Weihong Tan
Journal:  Angew Chem Int Ed Engl       Date:  2017-08-25       Impact factor: 15.336

5.  Crosslinking of DNA-linked ligands to target proteins for enrichment from DNA-encoded libraries.

Authors:  Kyle E Denton; Casey J Krusemark
Journal:  Medchemcomm       Date:  2016-08-02       Impact factor: 3.597

6.  Enhanced Targeted Gene Transduction: AAV2 Vectors Conjugated to Multiple Aptamers via Reducible Disulfide Linkages.

Authors:  Yuan Wu; Liqin Zhang; Cheng Cui; Sena Cansiz; Hao Liang; Cuichen Wu; I-Ting Teng; Weijun Chen; Yuan Liu; Weijia Hou; Xiaobing Zhang; Weihong Tan
Journal:  J Am Chem Soc       Date:  2017-12-27       Impact factor: 15.419

7.  Assessing histidine tags for recruiting deoxyribozymes to catalyze peptide and protein modification reactions.

Authors:  Chih-Chi Chu; Scott K Silverman
Journal:  Org Biomol Chem       Date:  2016-05-18       Impact factor: 3.876

8.  Selection of DNA-encoded chemical libraries against endogenous membrane proteins on live cells.

Authors:  Yiran Huang; Ling Meng; Qigui Nie; Yu Zhou; Langdong Chen; Shilian Yang; Yi Man Eva Fung; Xiaomeng Li; Cen Huang; Yan Cao; Yizhou Li; Xiaoyu Li
Journal:  Nat Chem       Date:  2020-12-21       Impact factor: 24.427

Review 9.  Nucleic-Acid Driven Cooperative Bioassays Using Probe Proximity or Split-Probe Techniques.

Authors:  Andresa B Bezerra; Amanda S N Kurian; Christopher J Easley
Journal:  Anal Chem       Date:  2020-11-04       Impact factor: 6.986

10.  Molecular Insights of Nickel Binding to Therapeutic Antibodies as a Possible New Antibody Superantigen.

Authors:  Chinh Tran-To Su; Wai-Heng Lua; Jun-Jie Poh; Wei-Li Ling; Joshua Yi Yeo; Samuel Ken-En Gan
Journal:  Front Immunol       Date:  2021-07-08       Impact factor: 7.561

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.