Literature DB >> 25139565

Fragment-based identification and optimization of a class of potent pyrrolo[2,1-f][1,2,4]triazine MAP4K4 inhibitors.

Lan Wang1, Mark Stanley1, Jason W Boggs2, Terry D Crawford1, Brandon J Bravo3, Anthony M Giannetti3, Seth F Harris4, Steven R Magnuson1, Jim Nonomiya3, Stephen Schmidt3, Ping Wu4, Weilan Ye5, Stephen E Gould5, Lesley J Murray2, Chudi O Ndubaku6, Huifen Chen7.   

Abstract

MAP4K4 has been shown to regulate key cellular processes that are tied to disease pathogenesis. In an effort to generate small molecule MAP4K4 inhibitors, a fragment-based screen was carried out and a pyrrolotriazine fragment with excellent ligand efficiency was identified. Further modification of this fragment guided by X-ray crystal structures and molecular modeling led to the discovery of a series of promising compounds with good structural diversity and physicochemical properties. These compounds exhibited single digit nanomolar potency and compounds 35 and 44 achieved good in vivo exposure.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Fragment-based lead discovery; Kinase inhibitors; MAP4K4; P-loop conformation; Pyrrolotriazine

Mesh:

Substances:

Year:  2014        PMID: 25139565     DOI: 10.1016/j.bmcl.2014.07.071

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  11 in total

1.  Discovery of an in Vivo Tool to Establish Proof-of-Concept for MAP4K4-Based Antidiabetic Treatment.

Authors:  Mark Ammirati; Scott W Bagley; Samit K Bhattacharya; Leonard Buckbinder; Anthony A Carlo; Rebecca Conrad; Christian Cortes; Robert L Dow; Matthew S Dowling; Ayman El-Kattan; Kristen Ford; Cristiano R W Guimarães; David Hepworth; Wenhua Jiao; Jennifer LaPerle; Shenping Liu; Allyn Londregan; Paula M Loria; Alan M Mathiowetz; Michael Munchhof; Suvi T M Orr; Donna N Petersen; David A Price; Athanasia Skoura; Aaron C Smith; Jian Wang
Journal:  ACS Med Chem Lett       Date:  2015-10-06       Impact factor: 4.345

Review 2.  Scaffold-hopping as a strategy to address metabolic liabilities of aromatic compounds.

Authors:  Phillip R Lazzara; Terry W Moore
Journal:  RSC Med Chem       Date:  2019-12-16

3.  DockBench as docking selector tool: the lesson learned from D3R Grand Challenge 2015.

Authors:  Veronica Salmaso; Mattia Sturlese; Alberto Cuzzolin; Stefano Moro
Journal:  J Comput Aided Mol Des       Date:  2016-09-16       Impact factor: 3.686

4.  Improved pose and affinity predictions using different protocols tailored on the basis of data availability.

Authors:  Philip Prathipati; Chioko Nagao; Shandar Ahmad; Kenji Mizuguchi
Journal:  J Comput Aided Mol Des       Date:  2016-10-06       Impact factor: 3.686

5.  Germinal-center kinase-like kinase co-crystal structure reveals a swapped activation loop and C-terminal extension.

Authors:  Douglas Marcotte; Mia Rushe; Robert M Arduini; Christine Lukacs; Kateri Atkins; Xin Sun; Kevin Little; Michael Cullivan; Murugan Paramasivam; Thomas A Patterson; Thomas Hesson; Timothy D McKee; Tricia L May-Dracka; Zhili Xin; Andrea Bertolotti-Ciarlet; Govinda R Bhisetti; Joseph P Lyssikatos; Laura F Silvian
Journal:  Protein Sci       Date:  2016-10-21       Impact factor: 6.725

6.  Molecular docking performance evaluated on the D3R Grand Challenge 2015 drug-like ligand datasets.

Authors:  Edithe Selwa; Virginie Y Martiny; Bogdan I Iorga
Journal:  J Comput Aided Mol Des       Date:  2016-10-03       Impact factor: 3.686

7.  D3R grand challenge 2015: Evaluation of protein-ligand pose and affinity predictions.

Authors:  Symon Gathiaka; Shuai Liu; Michael Chiu; Huanwang Yang; Jeanne A Stuckey; You Na Kang; Jim Delproposto; Ginger Kubish; James B Dunbar; Heather A Carlson; Stephen K Burley; W Patrick Walters; Rommie E Amaro; Victoria A Feher; Michael K Gilson
Journal:  J Comput Aided Mol Des       Date:  2016-09-30       Impact factor: 3.686

8.  Optimal strategies for virtual screening of induced-fit and flexible target in the 2015 D3R Grand Challenge.

Authors:  Zhaofeng Ye; Matthew P Baumgartner; Bentley M Wingert; Carlos J Camacho
Journal:  J Comput Aided Mol Des       Date:  2016-08-29       Impact factor: 3.686

9.  Structure-Based Design of GNE-495, a Potent and Selective MAP4K4 Inhibitor with Efficacy in Retinal Angiogenesis.

Authors:  Chudi O Ndubaku; Terry D Crawford; Huifen Chen; Jason W Boggs; Joy Drobnick; Seth F Harris; Rajiv Jesudason; Erin McNamara; Jim Nonomiya; Amy Sambrone; Stephen Schmidt; Tanya Smyczek; Philip Vitorino; Lan Wang; Ping Wu; Stacey Yeung; Jinhua Chen; Kevin Chen; Charles Z Ding; Tao Wang; Zijin Xu; Stephen E Gould; Lesley J Murray; Weilan Ye
Journal:  ACS Med Chem Lett       Date:  2015-06-29       Impact factor: 4.345

10.  Silencing of Long Non-coding RNA GAS5 Suppresses Neuron Cell Apoptosis and Nerve Injury in Ischemic Stroke Through Inhibiting DNMT3B-Dependent MAP4K4 Methylation.

Authors:  Yiming Deng; Duanduan Chen; Feng Gao; Hong Lv; Guojun Zhang; Xuan Sun; Lian Liu; Dapeng Mo; Ning Ma; Ligang Song; Xiaochuan Huo; Tianyi Yan; Jingbo Zhang; Yun Luo; Zhongrong Miao
Journal:  Transl Stroke Res       Date:  2020-01-29       Impact factor: 6.800

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