Literature DB >> 25131838

Using the virtual brain to reveal the role of oscillations and plasticity in shaping brain's dynamical landscape.

Dipanjan Roy1, Rodrigo Sigala, Michael Breakspear, Anthony Randal McIntosh, Viktor K Jirsa, Gustavo Deco, Petra Ritter.   

Abstract

Spontaneous brain activity, that is, activity in the absence of controlled stimulus input or an explicit active task, is topologically organized in multiple functional networks (FNs) maintaining a high degree of coherence. These "resting state networks" are constrained by the underlying anatomical connectivity between brain areas. They are also influenced by the history of task-related activation. The precise rules that link plastic changes and ongoing dynamics of resting-state functional connectivity (rs-FC) remain unclear. Using the framework of the open source neuroinformatics platform "The Virtual Brain," we identify potential computational mechanisms that alter the dynamical landscape, leading to reconfigurations of FNs. Using a spiking neuron model, we first demonstrate that network activity in the absence of plasticity is characterized by irregular oscillations between low-amplitude asynchronous states and high-amplitude synchronous states. We then demonstrate the capability of spike-timing-dependent plasticity (STDP) combined with intrinsic alpha (8-12 Hz) oscillations to efficiently influence learning. Further, we show how alpha-state-dependent STDP alters the local area dynamics from an irregular to a highly periodic alpha-like state. This is an important finding, as the cortical input from the thalamus is at the rate of alpha. We demonstrate how resulting rhythmic cortical output in this frequency range acts as a neuronal tuner and, hence, leads to synchronization or de-synchronization between brain areas. Finally, we demonstrate that locally restricted structural connectivity changes influence local as well as global dynamics and lead to altered rs-FC.

Keywords:  STDP; The Virtual Brain; alpha rhythm; network dynamics; plasticity; resting state; whole brain simulations

Mesh:

Year:  2014        PMID: 25131838     DOI: 10.1089/brain.2014.0252

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  16 in total

1.  Mapping complementary features of cross-species structural connectivity to construct realistic "Virtual Brains".

Authors:  Gleb Bezgin; Ana Solodkin; Rembrandt Bakker; Petra Ritter; Anthony R McIntosh
Journal:  Hum Brain Mapp       Date:  2017-01-05       Impact factor: 5.038

2.  Quantifying Differences Between Passive and Task-Evoked Intrinsic Functional Connectivity in a Large-Scale Brain Simulation.

Authors:  Antonio Ulloa; Barry Horwitz
Journal:  Brain Connect       Date:  2018-12

3.  Analytical Operations Relate Structural and Functional Connectivity in the Brain.

Authors:  Maria Luisa Saggio; Petra Ritter; Viktor K Jirsa
Journal:  PLoS One       Date:  2016-08-18       Impact factor: 3.240

Review 4.  On the nature and use of models in network neuroscience.

Authors:  Danielle S Bassett; Perry Zurn; Joshua I Gold
Journal:  Nat Rev Neurosci       Date:  2018-09       Impact factor: 34.870

Review 5.  A new neuroinformatics approach to personalized medicine in neurology: The Virtual Brain.

Authors:  Maria I Falcon; Viktor Jirsa; Ana Solodkin
Journal:  Curr Opin Neurol       Date:  2016-08       Impact factor: 5.710

6.  Functional Mechanisms of Recovery after Chronic Stroke: Modeling with the Virtual Brain.

Authors:  Maria Inez Falcon; Jeffrey D Riley; Viktor Jirsa; Anthony R McIntosh; E Elinor Chen; Ana Solodkin
Journal:  eNeuro       Date:  2016-04-04

7.  Near-Infrared Spectroscopy - Electroencephalography-Based Brain-State-Dependent Electrotherapy: A Computational Approach Based on Excitation-Inhibition Balance Hypothesis.

Authors:  Snigdha Dagar; Shubhajit Roy Chowdhury; Raju Surampudi Bapi; Anirban Dutta; Dipanjan Roy
Journal:  Front Neurol       Date:  2016-08-08       Impact factor: 4.003

8.  Relating Alpha Power and Phase to Population Firing and Hemodynamic Activity Using a Thalamo-cortical Neural Mass Model.

Authors:  Robert Becker; Stuart Knock; Petra Ritter; Viktor Jirsa
Journal:  PLoS Comput Biol       Date:  2015-09-03       Impact factor: 4.475

Review 9.  State-dependencies of learning across brain scales.

Authors:  Petra Ritter; Jan Born; Michael Brecht; Hubert R Dinse; Uwe Heinemann; Burkhard Pleger; Dietmar Schmitz; Susanne Schreiber; Arno Villringer; Richard Kempter
Journal:  Front Comput Neurosci       Date:  2015-02-26       Impact factor: 2.380

10.  TVB-EduPack-An Interactive Learning and Scripting Platform for The Virtual Brain.

Authors:  Henrik Matzke; Michael Schirner; Daniel Vollbrecht; Simon Rothmeier; Adalberto Llarena; Raúl Rojas; Paul Triebkorn; Lia Domide; Jochen Mersmann; Ana Solodkin; Viktor K Jirsa; Anthony Randal McIntosh; Petra Ritter
Journal:  Front Neuroinform       Date:  2015-11-25       Impact factor: 4.081

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