Literature DB >> 27224088

A new neuroinformatics approach to personalized medicine in neurology: The Virtual Brain.

Maria I Falcon1, Viktor Jirsa, Ana Solodkin.   

Abstract

PURPOSE OF REVIEW: An exciting advance in the field of neuroimaging is the acquisition and processing of very large data sets (so called 'big data'), permitting large-scale inferences that foster a greater understanding of brain function in health and disease. Yet what we are clearly lacking are quantitative integrative tools to translate this understanding to the individual level to lay the basis for personalized medicine. RECENT
FINDINGS: Here we address this challenge through a review on how the relatively new field of neuroinformatics modeling has the capacity to track brain network function at different levels of inquiry, from microscopic to macroscopic and from the localized to the distributed. In this context, we introduce a new and unique multiscale approach, The Virtual Brain (TVB), that effectively models individualized brain activity, linking large-scale (macroscopic) brain dynamics with biophysical parameters at the microscopic level. We also show how TVB modeling provides unique biological interpretable data in epilepsy and stroke.
SUMMARY: These results establish the basis for a deliberate integration of computational biology and neuroscience into clinical approaches for elucidating cellular mechanisms of disease. In the future, this can provide the means to create a collection of disease-specific models that can be applied on the individual level to personalize therapeutic interventions. VIDEO ABSTRACT.

Entities:  

Mesh:

Year:  2016        PMID: 27224088      PMCID: PMC5536184          DOI: 10.1097/WCO.0000000000000344

Source DB:  PubMed          Journal:  Curr Opin Neurol        ISSN: 1350-7540            Impact factor:   5.710


  53 in total

Review 1.  Biomarkers and surrogate endpoints: preferred definitions and conceptual framework.

Authors: 
Journal:  Clin Pharmacol Ther       Date:  2001-03       Impact factor: 6.875

2.  The path to personalized medicine.

Authors:  Margaret A Hamburg; Francis S Collins
Journal:  N Engl J Med       Date:  2010-06-15       Impact factor: 91.245

3.  The role of nonlinearity in computing graph-theoretical properties of resting-state functional magnetic resonance imaging brain networks.

Authors:  D Hartman; J Hlinka; M Palus; D Mantini; M Corbetta
Journal:  Chaos       Date:  2011-03       Impact factor: 3.642

Review 4.  Theory and simulation in neuroscience.

Authors:  Wulfram Gerstner; Henning Sprekeler; Gustavo Deco
Journal:  Science       Date:  2012-10-05       Impact factor: 47.728

Review 5.  Connectivity-based approaches in stroke and recovery of function.

Authors:  Christian Grefkes; Gereon R Fink
Journal:  Lancet Neurol       Date:  2014-02       Impact factor: 44.182

6.  How local excitation-inhibition ratio impacts the whole brain dynamics.

Authors:  Gustavo Deco; Adrián Ponce-Alvarez; Patric Hagmann; Gian Luca Romani; Dante Mantini; Maurizio Corbetta
Journal:  J Neurosci       Date:  2014-06-04       Impact factor: 6.167

7.  A model of neuronal bursting using three coupled first order differential equations.

Authors:  J L Hindmarsh; R M Rose
Journal:  Proc R Soc Lond B Biol Sci       Date:  1984-03-22

Review 8.  New evidence for therapies in stroke rehabilitation.

Authors:  Bruce H Dobkin; Andrew Dorsch
Journal:  Curr Atheroscler Rep       Date:  2013-06       Impact factor: 5.113

9.  Size doesn't matter: cortical stroke lesion volume is not associated with upper extremity motor impairment and function in mild, chronic hemiparesis.

Authors:  Stephen J Page; Lynne V Gauthier; Susan White
Journal:  Arch Phys Med Rehabil       Date:  2013-01-18       Impact factor: 3.966

10.  The Virtual Brain: Modeling Biological Correlates of Recovery after Chronic Stroke.

Authors:  Maria Inez Falcon; Jeffrey D Riley; Viktor Jirsa; Anthony R McIntosh; Ahmed D Shereen; E Elinor Chen; Ana Solodkin
Journal:  Front Neurol       Date:  2015-11-02       Impact factor: 4.003

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  15 in total

1.  Acute Post-Traumatic Sleep May Define Vulnerability to a Second Traumatic Brain Injury in Mice.

Authors:  Rachel K Rowe; Jordan L Harrison; Helena W Morrison; Vignesh Subbian; Sean M Murphy; Jonathan Lifshitz
Journal:  J Neurotrauma       Date:  2018-12-18       Impact factor: 5.269

Review 2.  From Maps to Multi-dimensional Network Mechanisms of Mental Disorders.

Authors:  Urs Braun; Axel Schaefer; Richard F Betzel; Heike Tost; Andreas Meyer-Lindenberg; Danielle S Bassett
Journal:  Neuron       Date:  2018-01-03       Impact factor: 17.173

Review 3.  Sleep Dysfunction and Grey Matter Volume.

Authors:  Gintare Paulekiene; Milda Pajarskiene; Evelina Pajediene; Andrius Radziunas
Journal:  Curr Neurol Neurosci Rep       Date:  2022-04-02       Impact factor: 5.081

Review 4.  On the nature and use of models in network neuroscience.

Authors:  Danielle S Bassett; Perry Zurn; Joshua I Gold
Journal:  Nat Rev Neurosci       Date:  2018-09       Impact factor: 34.870

Review 5.  Quantitative systems pharmacology in neuroscience: Novel methodologies and technologies.

Authors:  Peter Bloomingdale; Tatiana Karelina; Murat Cirit; Sarah F Muldoon; Justin Baker; William J McCarty; Hugo Geerts; Sreeraj Macha
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2021-03-29

6.  Control of brain network dynamics across diverse scales of space and time.

Authors:  Evelyn Tang; Harang Ju; Graham L Baum; David R Roalf; Theodore D Satterthwaite; Fabio Pasqualetti; Danielle S Bassett
Journal:  Phys Rev E       Date:  2020-06       Impact factor: 2.529

7.  Dynamiceuticals: The Next Stage in Personalized Medicine.

Authors:  Jose L Perez Velazquez
Journal:  Front Neurosci       Date:  2017-06-07       Impact factor: 4.677

8.  Classifying dynamic transitions in high dimensional neural mass models: A random forest approach.

Authors:  Lauric A Ferrat; Marc Goodfellow; John R Terry
Journal:  PLoS Comput Biol       Date:  2018-03-02       Impact factor: 4.475

Review 9.  Transforming big data into computational models for personalized medicine and health care.

Authors:  S M Reza Soroushmehr; Kayvan Najarian
Journal:  Dialogues Clin Neurosci       Date:  2016-09       Impact factor: 5.986

10.  Emergent Spatial Patterns of Excitatory and Inhibitory Synaptic Strengths Drive Somatotopic Representational Discontinuities and their Plasticity in a Computational Model of Primary Sensory Cortical Area 3b.

Authors:  Kamil A Grajski
Journal:  Front Comput Neurosci       Date:  2016-07-25       Impact factor: 2.380

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