| Literature DB >> 25111588 |
Rufus Cartwright1, Anna C Kirby2, Kari A O Tikkinen3, Altaf Mangera4, Gans Thiagamoorthy5, Prabhakar Rajan6, Jori Pesonen7, Chris Ambrose8, Juan Gonzalez-Maffe9, Phillip Bennett10, Tom Palmer11, Andrew Walley12, Marjo-Riitta Järvelin13, Chris Chapple4, Vik Khullar14.
Abstract
OBJECTIVE: Family studies and twin studies demonstrate that lower urinary tract symptoms and pelvic organ prolapse are heritable. This review aimed to identify genetic polymorphisms tested for an association with lower urinary tract symptoms or prolapse, and to assess the strength, consistency, and risk of bias among reported associations. STUDYEntities:
Keywords: genetics; incontinence; lower urinary tract symptoms; overactive bladder; prolapse; systematic review
Mesh:
Year: 2014 PMID: 25111588 PMCID: PMC4342521 DOI: 10.1016/j.ajog.2014.08.005
Source DB: PubMed Journal: Am J Obstet Gynecol ISSN: 0002-9378 Impact factor: 8.661
Figure 1Flowchart outlining literature search and article evaluation process
a American Society of Human Genetics, American Urological Association, American Urogynecologic Society, European Association of Urology, European Society of Human Genetics, International Continence Society, International Urogynecological Association, and Society of Gynecologic Surgeons abstracts 2005 through 2014, using online search interfaces and/or full text search of abstract book PDFs; b Includes studies enrolling only men (n = 122), enrolling only children (n = 2), narrative reviews or letters (n = 12), inapplicable phenotype (n = 2), and other study designs including pharmacogenetic studies, gene expression studies, or methylation studies (n = 8); c Authors contacted by email for additional data from 18 studies.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Included studies
| Study | Journal and year | Country | Descent, ethnicity, race | Gene symbols(s) | Polymorphism(s) dbSNP ID | Case definition | Control definition | Cases genotyped, n | Controls genotyped, n |
|---|---|---|---|---|---|---|---|---|---|
| Allen-Brady et al | Obstet Gynecol 2011 | United States, The Netherlands | White and Northern European descent | rs1455311 | Surgically treated/recurrent POP with family history | Population controls | 191 | 3036 | |
| Campeau et al | Neurourol Urodyn 2011 (ICS abstract) | United States | Not stated | rs1144393 | Surgically treated POP | Hospital controls “without POP” | 63 | 93 | |
| Chen et al | Am J Obstet Gynecol 2010 | United States | African American and Caucasian | rs10911193 | POP stage >II | POP stage <II | 165 | 246 | |
| Chen et al | Int Urogynecol J 2008 | Taiwan | Taiwanese | rs17847075 | POPQ ≥2 | POPQ <2 | 88 | 153 | |
| Chen et al | Acta Obstet Gynecol 2009 | Taiwan | Taiwanese | PGR | rs500760 | POPQ ≥2 | POPQ <2 | 87 | 150 |
| Chen et al | Am Soc Hum Genet 2013 | United States | African American and Hispanic American | rs2086297 | Symptomatic SUI | No SUI | ≈3343 | ≈8183 | |
| Chen et al | Int Urogynecol J 2008 | Taiwan | Taiwanese | rs1800255 | POPQ ≥2 | POPQ <2 | 84 | 147 | |
| Chen et al | Eur J Obstet Gynecol 2010 | Taiwan | Taiwanese | rs3918242 | POPQ ≥2 | POPQ <2 | 92 | 152 | |
| Chen et al | Eur J Obstet Gynecol 2008 | Taiwan | Taiwanese | rs2987983 | POPQ ≥2 | POPQ <2 | 69 | 141 | |
| Cho et al | Yonsei Med J 2009 | Korea | Korean | rs1800012 | Surgically treated POPQ ≥3 | POPQ = 0 | 15 | 15 | |
| Choy et al | ICS abstract 2007 | Hong Kong | Chinese | rs5370 | POPQ ≥2 | Hospital “normal’’ controls and HapMap Han Chinese controls | 60 (rs5370) and 67 (rs10478694) | 210 | |
| Cornu et al | World J Urol 2011 | France | Caucasian | rs2234693 | Treated for UI (30 UUI, 107 SUI) | No UI or OAB | 121 | 66 | |
| Feiner et al | Int Urogynecol J 2009 | Israel | Caucasian or Ashkenazi-Jewish | rs1800012 | POPQ ≥3 | POPQ <2 | 36 | 36 | |
| Ferrari et al | Arch Gynecol Obstet 2012 | Italy | Italian | rs1800012 | POPQ ≥2 | POPQ <2 | 137 | 96 | |
| Ferreira et al | Am J Obstet Gynecol 2011 | Brazil | White or nonwhite | rs4994 | Symptomatic OAB without severe SUI | No LUTS | 49 | 169 | |
| Ferrell et al | Reprod Sci 2009 | United States | African American or Caucasian | rs16958477 | POP stage ≥II | POP stage <II | 137 | 130 | |
| Fu et al | J Urol 2009 (AUA abstract) | United States | Not stated | rs10911193 | POP stage ≥III | No POP or UI | 61 | 33 | |
| Honda et al | Neurourol Urodyn 2014 | Japan | Japanese | rs4994 | Symptomatic OAB | No OAB | 100 | 101 | |
| Jeon et al | J Urol 2009 | Korea | Korean | rs111929073 | POPQ ≥2 | POPQ <2 and no SUI | 36 | 36 | |
| Kim et al | Eur J Obstet Gynecol Reprod Biol 2014 | Korea | Korean | Null | POPQ ≥3 | POPQ <2 | 189 | 156 | |
| Kim et al | Menopause 2014 | Korea | Korean | rs1136410 | POPQ ≥3 | POPQ <2 | 185 | 155 | |
| Lince et al | Int Urogynecol J 2014 | The Netherlands | ≈99% Dutch | rs1800255 | POPQ ≥2 | POPQ <2 | 272 | 82 | |
| Martins et al | Neurourol Urodyn 2011 | Brazil | White or nonwhite | rs111929073 | POP stage ≥III | POP stage <II | 107 | 209 | |
| Noronha et al | J Investig Med 2010 | Brazil | Predominant European/white | rs6313 | Symptomatic UI | Self-reported continent women, and population controls | 68 | 849 | |
| Ozbek et al | J Obstet Gynaecol Res 2013 | Turkey | Caucasian | rs2165241 | Symptomatic SUI | No UI | 93 | 75 | |
| Rodrigues et al | Int Urogynecol J 2008 | Brazil | White or nonwhite | rs1800012 | POP stage ≥III | POP stage <II and no SUI | 107 | 209 | |
| Romero and Jamison | J Pelv Med Surg 2008 | United States | White | rs2071230 | POPQ ≥3 | POPQ <2 and no UI | 45 | 38 | |
| Sioutis et al | Int Urogynecol J 2011 | Greece | Greek | rs1800012 | SUI confirmed with urodynamics and positive pad test, and postmenopausal | Healthy postmenopausal | 45 | 45 | |
| Skorupski | Int Urogynecol J 2009 (IUGA abstract) | Poland | Polish | rs1800012 | POPQ ≥2 | POPQ <2 and no UI | 120 | 97 | |
| Skorupski et al | Am J Obstet Gynecol 2006 | Poland | Polish | rs1800012 | SUI confirmed with urodynamics and positive pad test | POPQ <2 and no UI | 50 | 50 | |
| Skorupski et al | Ginekol Polska 2010 | Poland | Polish | rs1799750 | POPQ ≥2 | POPQ <2 | 132 | 133 | |
| Takeda et al | ICS Abstract 2002 | Japan | Japanese | rs4994 | Any LUTS (includes mixed group of women and men) | No LUTS | 27 | 17 | |
| Velez Edwards et al | Am Soc Hum Gen 2013 | United States | African American and Hispanic American | rs28573326 | POP stage ≥I | POP stage = 0 | 1427 | 1274 | |
| Vishwajit et al | ICS abstract 2009 | United States | Not stated | rs1799750 | SUI with varying POP | Neither SUI nor POP | 40 | 15 | |
| Wu et al | Am J Obstet Gynecol 2012 | United States | Non-Hispanic white | rs10911193 | POPQ ≥3 | POPQ <2 | 239 | 197 | |
| Wu et al | Obstet Gynecol 2012 | United States | Non-Hispanic white | rs3918253 | POPQ ≥3 | POPQ <2 | 239 | 197 |
AUA, American Urological Association; ICS, International Continence Society; IUGA, International Urogynecological Association; LUTS, lower urinary tract symptoms; OAB, overactive bladder; POP, pelvic organ prolapse; POPQ, Pelvic Organ Prolapse Quantification system; SNP, single-nucleotide polymorphism; SUI, stress urinary incontinence; UI, urinary incontinence; UUI, urge urinary incontinence.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Assessments of descent/ethnicity/race as specified in primary publications, or from additional data from authors, or assumed for countries with low ethnic heterogeneity including Taiwan, Korea, and Japan
Genome-wide significant genes (P <5 × 10-8) reported in genome-wide association study.
Figure 2Forest plot of rs4994 SNP of ADRB3 and overactive bladder
Forest plot of studies reporting associations between rs4994 single-nucleotide polymorphism (SNP)* of beta 3 adrenoceptor gene and overactive bladder. *RefSNP alleles C/T. Plot presented as risk associated with minor allele C.
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Interim Venice assessments of epidemiological credibility for each metaanalysis
| Gene | SNP | Phenotype | Studies, n | Sample with minor allele | Pooled OR | I2 % | Deviation from HWE | Proteus effect | Harbord test | Funnel plot | Genotyping QC | Risk of population stratification | Venice rating | Overall credibility |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs4994 | OAB | 2 | 136 | 2.46 | 0.0 | None | None | n/a | n/a | Not reported | Yes | BBB | Moderate | |
| rs1800012 | SUI | 2 | 92 | 2.09 | 0.0 | Yes | None | n/a | n/a | Not reported | Low | CBC | Weak | |
| POP | 4 | 249 | 1.33 | 0.0 | None | None | .88 | Symmetric | Not reported | Yes | BBB | Moderate | ||
| rs1800255 | POP | 2 | 257 | 1.19 | 0.0 | None | Yes | n/a | n/a | Not reported | None | BCB | Weak | |
| rs111929073 | POP | 2 | 115 | 0.56 | 83.7 | None | None | n/a | n/a | Not reported | Yes | BCB | Weak | |
| rs10911193 | POP | 4 | 218 | 1.12 | 0.0 | None | None | .97 | Symmetric | Appropriate | Low | BCB | Weak | |
| rs20563 | POP | 3 | 525 | 1.12 | 0.0 | None | None | .86 | Symmetric | Appropriate | Low | BCA | Weak | |
| rs20558 | POP | 3 | 551 | 1.12 | 0.0 | None | None | .93 | Symmetric | Appropriate | Low | BCA | Weak | |
| rs1799750 | POP | 2 | 234 | 0.83 | 74.9 | Yes | Yes | n/a | n/a | Not reported | Low | BCC | Weak | |
| SUI | 2 | 150 | 0.88 | 3.4 | None | None | n/a | n/a | Not reported | Yes | BCC | Weak | ||
| rs3025058 | POP | 2 | 381 | 1.11 | 0.0 | Yes | None | n/a | n/a | Not reported | Low | BCC | Weak | |
| rs3918242 | POP | 2 | 99 | 1.25 | 0.0 | None | None | n/a | n/a | Not reported | Low | CCC | Weak | |
| rs17576 | POP | 3 | 473 | 1.05 | 68.9 | None | None | .72 | Symmetric | Not reported | Low | BCB | Weak |
Three-letter code corresponds to A through C ratings of amount of evidence, its consistency, and its protection from bias (Supplementary Figure).
HWE, Hardy Weinberg Equilibrium; OAB, overactive bladder; OR, odds ratio; POP, pelvic organ prolapse; QC, quality control; SNP, single-nucleotide polymorphism; SUI, stress urinary incontinence.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Pooled sample size of participants with minor allele
Checked in controls and whole population, and metaanalysis rechecked excluding studies with significant departure
Studies each include populations with mixed descent groups without reported adjustment.
Figure 3Forest plot of studies of rs1800013 SNP of COL1A1
Forest plot of studies reporting associations between rs1800012 single-nucleotide polymorphism (SNP)* of collagen type 1 alpha 1 gene and either stress urinary incontinence (SUI) or pelvic organ prolapse (POP). *RefSNP alleles G/T. Plot presented as risk associated with minor allele T.
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Figure 4Forest plot of COL3A1 SNPs and prolapse
Forest plot of studies reporting associations between rs1800255* and rs111929073* single-nucleotide polymorphisms (SNPs) of collagen type 3, alpha 1 gene and pelvic organ prolapse with either fixed or random effects models**. *For both SNPs RefSNP alleles A/G. Plot presented as risk associated with minor allele A. **Mantel-Haenszel fixed effects model (M-H)/DerSimonian and Laird random effects model (D+L).
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Figure 5Forest plot of LAMC1 SNPs and prolapse
Forest plot of studies reporting associations among rs10911193, rs20563, and rs20558 single-nucleotide polymorphisms (SNPs) of laminin gamma 1 gene and pelvic organ prolapse. *African American subsample. **White subsample. rs10911193 RefSNP alleles C/T. Plot presented as risk associated with minor allele T. rs20563 RefSNP alleles A/G. Plot presented as risk associated with minor allele A. rs20558 RefSNP alleles C/T. Plot presented as risk associated with minor allele C.
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Figure 6Forest plot of rs1799750 SNP of MMP1
Forest plot of studies reporting associations between rs1799750* single-nucleotide polymorphism (SNP) of matrix metalloproteinase 1 (MMP1) gene and either stress urinary incontinence (SUI) or pelvic organ prolapse (POP) with either fixed or random effects models. ∗RefSNP Alleles -/G. Plot presented as risk associated with minor deletion allele.
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Figure 7Forest plot of rs3025058 SNP of MMP3 and prolapse
Forest plot of studies reporting associations between rs3025058* single-nucleotide polymorphism (SNP) of matrix metalloproteinase 3 gene and pelvic organ prolapse. *RefSNP Alleles -/T. Plot presented as risk associated with minor deletion allele.
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Figure 8Forest plot of MM9 SNPs and prolapse
Forest plot of studies reporting associations between rs3918242* and rs17576** single-nucleotide polymorphisms (SNPs) of matrix metalloproteinase 9 gene and pelvic organ prolapse with either fixed or random effects models⌘. *rs3918242 RefSNP alleles C/T. Plot presented as risk associated with minor allele T. **rs17576 RefSNP alleles A/G. Plot presented as risk associated with minor allele A. ⌘Mantel-Haenszel fixed effects model (M-H)/DerSimonian and Laird random effects model (D+L).
CI, confidence interval; OR, odds ratio.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Functional annotation of investigated genes
| Official gene symbol | Gene name(s) | No. of studies included | Molecular function(s) |
|---|---|---|---|
| Adrenergic, alpha-1A-, receptor | 1 | Adrenoceptor activity | |
| Adrenergic, beta-3-, receptor | 3 | Adrenoceptor activity | |
| Androgen receptor | 1 | DNA binding | |
| Collagen, type I, alpha 1 | 7 | Structural molecule activity | |
| Collagen, type III, alpha 1 | 4 | Integrin binding | |
| Collagen, type XVIII, alpha 1 | 1 | Structural molecule activity | |
| Carboxypeptidase E | 1 | Metallocarboxypeptidase activity | |
| Cytochrome P450, family 17, subfamily A, polypeptide 1 | 1 | Steroid 17-alpha-monooxygenase activity | |
| Cytochrome P450, family 19, subfamily A, polypeptide 1 | 1 | Iron ion binding | |
| Endothelin 1 | 1 | Hormone activity | |
| Estrogen receptor 1 | 1 | DNA binding | |
| Estrogen receptor 2 (ER beta) | 1 | DNA binding | |
| Glutathione S-transferase mu 1 | 1 | Glutathione transferase activity | |
| Glutathione S-transferase pi 1 | 1 | Glutathione transferase activity | |
| Glutathione S-transferase theta 1 | 1 | Glutathione transferase activity | |
| 5-Hydroxytryptamine (serotonin) receptor 2A | 1 | Serotonin receptor activity | |
| Laminin, gamma 1 (formerly LAMB2) | 3 | Structural molecule activity | |
| Lysyl oxidase-like 1 | 3 | Copper ion binding | |
| Matrix metallopeptidase 1 (interstitial collagenase) | 5 | Endopeptidase activity | |
| Matrix metallopeptidase 10 (stromelysin 2) | 1 | Endopeptidase activity | |
| Matrix metallopeptidase 11 (stromelysin 3) | 1 | Endopeptidase activity | |
| Matrix metallopeptidase 2 (gelatinase A, 72-kDa gelatinase, 72-kDa type IV collagenase) | 1 | Endopeptidase activity | |
| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) | 3 | Endopeptidase activity | |
| Matrix metallopeptidase 8 (neutrophil collagenase) | 1 | Endopeptidase activity | |
| Matrix metallopeptidase 9 (gelatinase B, 92-kDa gelatinase, 92-kDa type IV collagenase) | 4 | Endopeptidase activity | |
| Poly (ADP-ribose) polymerase 1 | 1 | Telomere maintenance | |
| Progesterone receptor | 1 | DNA binding transcription factor activity | |
| Prolylcarboxypeptidase (angiotensinase C) | 1 | Carboxypeptidase activity | |
| TIMP metallopeptidase inhibitor 1 | 1 | Enzyme inhibitor activity, | |
| TIMP metallopeptidase inhibitor 3 | 1 | Enzyme inhibitor activity | |
| Zinc finger and AT hook domain containing | 1 | DNA binding |
Functions assigned from http://david.abcc.ncifcrf.gov.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.
Overrepresented Gene Ontology biological processes among investigated genes
| Biological process | GO term | Description | Genes |
|---|---|---|---|
| 1 | Collagen catabolic process | ||
| 2 | Proteinaceous extracellular matrix | ||
| 3 | Proteolysis | ||
| 4 | Metabolic process | ||
| 5 | Extracellular region | ||
| 6 | Cell-cell signalling | ||
| 7 | Extracellular space | ||
| 8 | Zinc ion binding |
All processes significant at P < .01, analysis using http://webclu.bio.wzw.tum.de/profcom/. Overrepresented Gene Ontology: http://www.geneontology.org.
Cartwright. Genetic association studies of LUTS and POP. Am J Obstet Gynecol 2015.