Literature DB >> 22899720

Modeling the self-organized phosphatidylinositol lipid signaling system in chemotactic cells using quantitative image analysis.

Tatsuo Shibata1, Masatoshi Nishikawa, Satomi Matsuoka, Masahiro Ueda.   

Abstract

A key signaling event that is responsible for gradient sensing in eukaryotic cell chemotaxis is a phosphatidylinositol (PtdIns) lipid reaction system. The self-organization activity of this PtdIns lipid system induces an inherent polarity, even in the absence of an external chemoattractant gradient, by producing a localized PtdIns (3,4,5)-trisphosphate [PtdIns(3,4,5)P(3)]-enriched domain on the membrane. Experimentally, we found that such a domain could exhibit two types of behavior: (1) it could be persistent and travel on the membrane, or (2) be stochastic and transient. Taking advantage of the simultaneous visualization of PtdIns(3,4,5)P(3) and the enzyme phosphatase and tensin homolog (PTEN), for which PtdIns(3,4,5)P(3) is a substrate, we statistically demonstrated the inter-dependence of their spatiotemporal dynamics. On the basis of this statistical analysis, we developed a theoretical model for the self-organization of PtdIns lipid signaling that can accurately reproduce both persistent and transient domain formation; these types of formations can be explained by the oscillatory and excitability properties of the system, respectively.

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Year:  2012        PMID: 22899720     DOI: 10.1242/jcs.108373

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  21 in total

1.  Intracellular encoding of spatiotemporal guidance cues in a self-organizing signaling system for chemotaxis in Dictyostelium cells.

Authors:  Tatsuo Shibata; Masatoshi Nishikawa; Satomi Matsuoka; Masahiro Ueda
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

2.  Modeling self-organized spatio-temporal patterns of PIP₃ and PTEN during spontaneous cell polarization.

Authors:  Fabian Knoch; Marco Tarantola; Eberhard Bodenschatz; Wouter-Jan Rappel
Journal:  Phys Biol       Date:  2014-07-15       Impact factor: 2.583

3.  A dual role model for active Rac1 in cell migration.

Authors:  Jan Faix; Igor Weber
Journal:  Small GTPases       Date:  2013-03-15

4.  Theoretical model for cell migration with gradient sensing and shape deformation.

Authors:  Tetsuya Hiraiwa; Akinori Baba; Tatsuo Shibata
Journal:  Eur Phys J E Soft Matter       Date:  2013-04-11       Impact factor: 1.890

5.  An excitable compass guides chemotaxis?

Authors:  William R Holmes
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

6.  Excitable signal transduction induces both spontaneous and directional cell asymmetries in the phosphatidylinositol lipid signaling system for eukaryotic chemotaxis.

Authors:  Masatoshi Nishikawa; Marcel Hörning; Masahiro Ueda; Tatsuo Shibata
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

7.  Three-Dimensional Cell Geometry Controls Excitable Membrane Signaling in Dictyostelium Cells.

Authors:  Marcel Hörning; Tatsuo Shibata
Journal:  Biophys J       Date:  2018-12-20       Impact factor: 4.033

8.  Phase geometries of two-dimensional excitable waves govern self-organized morphodynamics of amoeboid cells.

Authors:  Daisuke Taniguchi; Shuji Ishihara; Takehiko Oonuki; Mai Honda-Kitahara; Kunihiko Kaneko; Satoshi Sawai
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-11       Impact factor: 11.205

Review 9.  Envisioning migration: mathematics in both experimental analysis and modeling of cell behavior.

Authors:  Elizabeth R Zhang; Lani F Wu; Steven J Altschuler
Journal:  Curr Opin Cell Biol       Date:  2013-05-06       Impact factor: 8.382

Review 10.  Excitable behavior in amoeboid chemotaxis.

Authors:  Changji Shi; Pablo A Iglesias
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-06-11
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