| Literature DB >> 24989039 |
Juan Miguel Lopez del Amo1, Vipin Agarwal, Riddhiman Sarkar, Justin Porter, Sam Asami, Martin Rübbelke, Uwe Fink, Yi Xue, Oliver F Lange, Bernd Reif.
Abstract
Relaxation parameters such as longitudinal relaxation are susceptible to artifacts such as spin diffusion, and can be affected by paramagnetic impurities as e.g. oxygen, which make a quantitative interpretation difficult. We present here the site-specific measurement of [(1)H](13)C and [(1)H](15)N heteronuclear rates in an immobilized protein. For methyls, a strong effect is expected due to the three-fold rotation of the methyl group. Quantification of the [(1)H](13)C heteronuclear NOE in combination with (13)C-R 1 can yield a more accurate analysis of side chain motional parameters. The observation of significant [(1)H](15)N heteronuclear NOEs for certain backbone amides, as well as for specific asparagine/glutamine sidechain amides is consistent with MD simulations. The measurement of site-specific heteronuclear NOEs is enabled by the use of highly deuterated microcrystalline protein samples in which spin diffusion is reduced in comparison to protonated samples.Entities:
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Year: 2014 PMID: 24989039 DOI: 10.1007/s10858-014-9843-1
Source DB: PubMed Journal: J Biomol NMR ISSN: 0925-2738 Impact factor: 2.835