Literature DB >> 24954188

Clinical, genomic, and metagenomic characterization of oral tongue squamous cell carcinoma in patients who do not smoke.

Ryan Li1, Daniel L Faden2, Carole Fakhry1,3, Chaz Langelier4, Yuchen Jiao5, Yuxuan Wang5, Matthew D Wilkerson6,7, Chandra Sekhar Pedamallu8,9, Matthew Old10, James Lang10, Myriam Loyo1, Sun Mi Ahn1, Marietta Tan1, Zhen Gooi1, Jason Chan1, Jeremy Richmon1, Laura D Wood11, Ralph H Hruban11, Justin Bishop11, William H Westra11, Christine H Chung12, Joseph Califano3, Christine G Gourin1, Chetan Bettegowda13, Matthew Meyerson8,9,14, Nickolas Papadopoulos5, Kenneth W Kinzler5, Bert Vogelstein5, Joseph L DeRisi15,16, Wayne M Koch1, Nishant Agrawal1,5.   

Abstract

BACKGROUND: Evidence suggests the incidence of oral tongue squamous cell carcinoma is increasing in young patients, many who have no history of tobacco use.
METHODS: We clinically reviewed 89 patients with oral tongue cancer. Exomic sequencing of tumor DNA from 6 nonsmokers was performed and compared to previously sequenced cases. RNA from 20 tumors was evaluated by massively parallel sequencing to search for potentially oncogenic viruses.
RESULTS: Non-smokers (53 of 89) were younger than smokers (36 of 89; mean, 50.4 vs 61.9 years; p < .001), and seemed more likely to be women (58.5% vs 38.9%; p = .069). Nonsmokers had fewer TP53 mutations (p = .02) than smokers. No tumor-associated viruses were detected.
CONCLUSION: The young age of nonsmoking patients with oral tongue cancer and fewer TP53 mutations suggest a viral role in this disease. Our efforts to identify such a virus were unsuccessful. Further studies are warranted to elucidate the drivers of carcinogenesis in these patients.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  head and neck cancer; next-generation sequencing; nonsmokers; oral tongue; squamous cell carcinoma

Mesh:

Substances:

Year:  2014        PMID: 24954188      PMCID: PMC4272912          DOI: 10.1002/hed.23807

Source DB:  PubMed          Journal:  Head Neck        ISSN: 1043-3074            Impact factor:   3.147


  41 in total

1.  Human enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua.

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Journal:  J Virol       Date:  2010-06-30       Impact factor: 5.103

2.  The American Joint Committee on Cancer: the 7th edition of the AJCC cancer staging manual and the future of TNM.

Authors:  Stephen B Edge; Carolyn C Compton
Journal:  Ann Surg Oncol       Date:  2010-06       Impact factor: 5.344

Review 3.  UVR-induced G-C to C-G transversions from oxidative DNA damage.

Authors:  Katsuhito Kino; Hiroshi Sugiyama
Journal:  Mutat Res       Date:  2005-01-25       Impact factor: 2.433

4.  Never-smokers, never-drinkers: unique clinical subgroup of young patients with head and neck squamous cell cancers.

Authors:  Stephen L Harris; Randall J Kimple; D Neil Hayes; Marion E Couch; Julian G Rosenman
Journal:  Head Neck       Date:  2010-04       Impact factor: 3.147

5.  Incidence trends for human papillomavirus-related and -unrelated oral squamous cell carcinomas in the United States.

Authors:  Anil K Chaturvedi; Eric A Engels; William F Anderson; Maura L Gillison
Journal:  J Clin Oncol       Date:  2008-02-01       Impact factor: 44.544

6.  Multiple pathways for Epstein-Barr virus episome loss from nasopharyngeal carcinoma.

Authors:  Dirk P Dittmer; Chelsey J Hilscher; Margaret L Gulley; Eric V Yang; Min Chen; Ronald Glaser
Journal:  Int J Cancer       Date:  2008-11-01       Impact factor: 7.396

7.  The World Health Organization histological classification of tumours of the upper respiratory tract and ear. A commentary on the second edition.

Authors:  K Shanmugaratnam; L H Sobin
Journal:  Cancer       Date:  1993-04-15       Impact factor: 6.860

8.  Alcohol drinking in never users of tobacco, cigarette smoking in never drinkers, and the risk of head and neck cancer: pooled analysis in the International Head and Neck Cancer Epidemiology Consortium.

Authors:  Mia Hashibe; Paul Brennan; Simone Benhamou; Xavier Castellsague; Chu Chen; Maria Paula Curado; Luigino Dal Maso; Alexander W Daudt; Eleonora Fabianova; Leticia Fernandez; Victor Wünsch-Filho; Silvia Franceschi; Richard B Hayes; Rolando Herrero; Sergio Koifman; Carlo La Vecchia; Philip Lazarus; Fabio Levi; Dana Mates; Elena Matos; Ana Menezes; Joshua Muscat; Jose Eluf-Neto; Andrew F Olshan; Peter Rudnai; Stephen M Schwartz; Elaine Smith; Erich M Sturgis; Neonilia Szeszenia-Dabrowska; Renato Talamini; Qingyi Wei; Deborah M Winn; David Zaridze; Witold Zatonski; Zuo-Feng Zhang; Julien Berthiller; Paolo Boffetta
Journal:  J Natl Cancer Inst       Date:  2007-05-16       Impact factor: 13.506

9.  MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

Authors:  Kai Wang; Darshan Singh; Zheng Zeng; Stephen J Coleman; Yan Huang; Gleb L Savich; Xiaping He; Piotr Mieczkowski; Sara A Grimm; Charles M Perou; James N MacLeod; Derek Y Chiang; Jan F Prins; Jinze Liu
Journal:  Nucleic Acids Res       Date:  2010-08-27       Impact factor: 16.971

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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  32 in total

1.  Phylogenetic analysis of multiple FISH markers in oral tongue squamous cell carcinoma suggests that a diverse distribution of copy number changes is associated with poor prognosis.

Authors:  Darawalee Wangsa; Salim Akhter Chowdhury; Michael Ryott; E Michael Gertz; Göran Elmberger; Gert Auer; Elisabeth Åvall Lundqvist; Stefan Küffer; Philipp Ströbel; Alejandro A Schäffer; Russell Schwartz; Eva Munck-Wikland; Thomas Ried; Kerstin Heselmeyer-Haddad
Journal:  Int J Cancer       Date:  2015-08-28       Impact factor: 7.396

2.  CD147 and Ki-67 overexpression confers poor prognosis in squamous cell carcinoma of oral tongue: a tissue microarray study.

Authors:  Yau-Hua Yu; Jose Morales; Lei Feng; J Jack Lee; Adel K El-Naggar; Nadarajah Vigneswaran
Journal:  Oral Surg Oral Med Oral Pathol Oral Radiol       Date:  2015-01-07

3.  Characterization of epithelial oral dysplasia in non-smokers: First steps towards precision medicine.

Authors:  L D Rock; M P Rosin; L Zhang; B Chan; B Shariati; D M Laronde
Journal:  Oral Oncol       Date:  2018-02-20       Impact factor: 5.337

4.  Head and neck squamous cell cancers in the United States are rare and the risk now is higher among white individuals compared with black individuals.

Authors:  Carole Fakhry; Martin Krapcho; David W Eisele; Gypsyamber D'Souza
Journal:  Cancer       Date:  2018-03-13       Impact factor: 6.860

5.  The Role of Age and Merkel Cell Polyomavirus in Oral Cavity Cancers.

Authors:  Melina Windon; Carole Fakhry; Lisa Rooper; Patrick Ha; David Schoppy; Brett Miles; Wayne Koch; Peter Vosler; David Eisele; Gypsyamber D'Souza
Journal:  Otolaryngol Head Neck Surg       Date:  2020-06-23       Impact factor: 3.497

Review 6.  Tongue carcinoma in young adults: a review of the literature.

Authors:  A Paderno; R Morello; C Piazza
Journal:  Acta Otorhinolaryngol Ital       Date:  2018-06       Impact factor: 2.124

Review 7.  Sequencing the head and neck cancer genome: implications for therapy.

Authors:  Wenyue Sun; Joseph A Califano
Journal:  Ann N Y Acad Sci       Date:  2014-12-01       Impact factor: 5.691

Review 8.  Early onset oral tongue cancer in the United States: A literature review.

Authors:  Benjamin R Campbell; James L Netterville; Robert J Sinard; Kyle Mannion; Sarah L Rohde; Alexander Langerman; Young J Kim; James S Lewis; Krystle A Lang Kuhs
Journal:  Oral Oncol       Date:  2018-10-14       Impact factor: 5.337

9.  Genome-wide gene expression profiling of tongue squamous cell carcinoma by RNA-seq.

Authors:  Hai Xia Zhang; Ou Sheng Liu; Chao Deng; Yan He; Ye Qian Feng; Jin An Ma; Chun Hong Hu; Zhan Gui Tang
Journal:  Clin Oral Investig       Date:  2017-03-29       Impact factor: 3.573

Review 10.  Therapeutic insights from genomic studies of head and neck squamous cell carcinomas.

Authors:  Peter S Hammerman; D Neil Hayes; Jennifer R Grandis
Journal:  Cancer Discov       Date:  2015-02-02       Impact factor: 39.397

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