Literature DB >> 25905628

Optical Control of CRISPR/Cas9 Gene Editing.

James Hemphill1, Erin K Borchardt, Kalyn Brown1, Aravind Asokan, Alexander Deiters1.   

Abstract

The CRISPR/Cas9 system has emerged as an important tool in biomedical research for a wide range of applications, with significant potential for genome engineering and gene therapy. In order to achieve conditional control of the CRISPR/Cas9 system, a genetically encoded light-activated Cas9 was engineered through the site-specific installation of a caged lysine amino acid. Several potential lysine residues were identified as viable caging sites that can be modified to optically control Cas9 function, as demonstrated through optical activation and deactivation of both exogenous and endogenous gene function.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25905628      PMCID: PMC4919123          DOI: 10.1021/ja512664v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  39 in total

1.  High stability of Discosoma DsRed as compared to Aequorea EGFP.

Authors:  Vladislav V Verkhusha; Irina M Kuznetsova; Olesia V Stepanenko; Andrey G Zaraisky; Michail M Shavlovsky; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Biochemistry       Date:  2003-07-08       Impact factor: 3.162

2.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

Review 3.  Optical control of protein function through unnatural amino acid mutagenesis and other optogenetic approaches.

Authors:  Austin S Baker; Alexander Deiters
Journal:  ACS Chem Biol       Date:  2014-05-21       Impact factor: 5.100

Review 4.  Recent advances in the photochemical control of protein function.

Authors:  Chad W Riggsbee; Alexander Deiters
Journal:  Trends Biotechnol       Date:  2010-07-29       Impact factor: 19.536

5.  Genetic encoding of caged cysteine and caged homocysteine in bacterial and mammalian cells.

Authors:  Rajendra Uprety; Ji Luo; Jihe Liu; Yuta Naro; Subhas Samanta; Alexander Deiters
Journal:  Chembiochem       Date:  2014-06-27       Impact factor: 3.164

6.  Genetically encoded photocontrol of protein localization in mammalian cells.

Authors:  Arnaud Gautier; Duy P Nguyen; Hrvoje Lusic; Wenlin An; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2010-03-31       Impact factor: 15.419

7.  CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.

Authors:  Elitza Deltcheva; Krzysztof Chylinski; Cynthia M Sharma; Karine Gonzales; Yanjie Chao; Zaid A Pirzada; Maria R Eckert; Jörg Vogel; Emmanuelle Charpentier
Journal:  Nature       Date:  2011-03-31       Impact factor: 49.962

8.  Light-activated kinases enable temporal dissection of signaling networks in living cells.

Authors:  Arnaud Gautier; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2011-01-27       Impact factor: 15.419

9.  Expanding the genetic code of an animal.

Authors:  Sebastian Greiss; Jason W Chin
Journal:  J Am Chem Soc       Date:  2011-08-22       Impact factor: 15.419

10.  Genetically encoded optochemical probes for simultaneous fluorescence reporting and light activation of protein function with two-photon excitation.

Authors:  Ji Luo; Rajendra Uprety; Yuta Naro; Chungjung Chou; Duy P Nguyen; Jason W Chin; Alexander Deiters
Journal:  J Am Chem Soc       Date:  2014-10-23       Impact factor: 15.419

View more
  83 in total

1.  Very fast CRISPR on demand.

Authors:  Yang Liu; Roger S Zou; Shuaixin He; Yuta Nihongaki; Xiaoguang Li; Shiva Razavi; Bin Wu; Taekjip Ha
Journal:  Science       Date:  2020-06-12       Impact factor: 47.728

2.  Spatiotemporal Control of CRISPR/Cas9 Function in Cells and Zebrafish using Light-Activated Guide RNA.

Authors:  Wenyuan Zhou; Wes Brown; Anirban Bardhan; Michael Delaney; Amber S Ilk; Randy R Rauen; Shoeb I Kahn; Michael Tsang; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-06       Impact factor: 15.336

Review 3.  Approach for in vivo delivery of CRISPR/Cas system: a recent update and future prospect.

Authors:  Yu-Fan Chuang; Andrew J Phipps; Fan-Li Lin; Valerie Hecht; Alex W Hewitt; Peng-Yuan Wang; Guei-Sheung Liu
Journal:  Cell Mol Life Sci       Date:  2021-01-03       Impact factor: 9.261

4.  Complex transcriptional modulation with orthogonal and inducible dCas9 regulators.

Authors:  Yuchen Gao; Xin Xiong; Spencer Wong; Emeric J Charles; Wendell A Lim; Lei S Qi
Journal:  Nat Methods       Date:  2016-10-24       Impact factor: 28.547

Review 5.  Optochemical Control of Biological Processes in Cells and Animals.

Authors:  Nicholas Ankenbruck; Taylor Courtney; Yuta Naro; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-01       Impact factor: 15.336

6.  A Singular System with Precise Dosing and Spatiotemporal Control of CRISPR-Cas9.

Authors:  Debasish Manna; Basudeb Maji; Soumyashree A Gangopadhyay; Kurt J Cox; Qingxuan Zhou; Benjamin K Law; Ralph Mazitschek; Amit Choudhary
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-02       Impact factor: 15.336

7.  Optically controlled release of DNA based on nonradiative relaxation process of quenchers.

Authors:  Yusuke Ogura; Atsushi Onishi; Takahiro Nishimura; Jun Tanida
Journal:  Biomed Opt Express       Date:  2016-05-09       Impact factor: 3.732

8.  Near-infrared optogenetic engineering of photothermal nanoCRISPR for programmable genome editing.

Authors:  Xiaohong Chen; Yuxuan Chen; Huhu Xin; Tao Wan; Yuan Ping
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-15       Impact factor: 11.205

Review 9.  Precision Control of CRISPR-Cas9 Using Small Molecules and Light.

Authors:  Soumyashree A Gangopadhyay; Kurt J Cox; Debasish Manna; Donghyun Lim; Basudeb Maji; Qingxuan Zhou; Amit Choudhary
Journal:  Biochemistry       Date:  2019-01-22       Impact factor: 3.162

10.  Light-activation of Cre recombinase in zebrafish embryos through genetic code expansion.

Authors:  Wes Brown; Alexander Deiters
Journal:  Methods Enzymol       Date:  2019-04-30       Impact factor: 1.600

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.