Literature DB >> 24936528

A synthetic biochemistry molecular purge valve module that maintains redox balance.

Paul H Opgenorth1, Tyler P Korman1, James U Bowie2.   

Abstract

The greatest potential environmental benefit of metabolic engineering would be the production of high-volume commodity chemicals, such as biofuels. Yet, the high yields required for the economic viability of low-value chemicals is particularly hard to achieve in microbes owing to the myriad competing biochemical pathways. An alternative approach, which we call synthetic biochemistry, is to eliminate the organism by constructing biochemical pathways in vitro. Viable synthetic biochemistry, however, will require simple methods to replace the cellular circuitry that maintains cofactor balance. Here we design a simple purge valve module for maintaining NADP(+)/NADPH balance. We test the purge valve in the production of polyhydroxybutyryl bioplastic and isoprene--pathways where cofactor generation and utilization are unbalanced. We find that the regulatory system is highly robust to variations in cofactor levels and readily transportable. The molecular purge valve provides a step towards developing continuously operating, sustainable synthetic biochemistry systems.

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Year:  2014        PMID: 24936528     DOI: 10.1038/ncomms5113

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  23 in total

1.  High-yield hydrogen production from biomass by in vitro metabolic engineering: Mixed sugars coutilization and kinetic modeling.

Authors:  Joseph A Rollin; Julia Martin del Campo; Suwan Myung; Fangfang Sun; Chun You; Allison Bakovic; Roberto Castro; Sanjeev K Chandrayan; Chang-Hao Wu; Michael W W Adams; Ryan S Senger; Y-H Percival Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

Review 2.  Biomanufacturing: history and perspective.

Authors:  Yi-Heng Percival Zhang; Jibin Sun; Yanhe Ma
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-11       Impact factor: 3.346

3.  A synthetic biochemistry module for production of bio-based chemicals from glucose.

Authors:  Paul H Opgenorth; Tyler P Korman; James U Bowie
Journal:  Nat Chem Biol       Date:  2016-04-11       Impact factor: 15.040

Review 4.  A critical comparison of cellular and cell-free bioproduction systems.

Authors:  Nico J Claassens; Simon Burgener; Bastian Vögeli; Tobias J Erb; Arren Bar-Even
Journal:  Curr Opin Biotechnol       Date:  2019-06-14       Impact factor: 9.740

5.  A molecular rheostat maintains ATP levels to drive a synthetic biochemistry system.

Authors:  Paul H Opgenorth; Tyler P Korman; Liviu Iancu; James U Bowie
Journal:  Nat Chem Biol       Date:  2017-07-03       Impact factor: 15.040

6.  Functional Surface-immobilization of Genes Using Multistep Strand Displacement Lithography.

Authors:  Günther Pardatscher; Matthaeus Schwarz-Schilling; Sandra Sagredo; Friedrich C Simmel
Journal:  J Vis Exp       Date:  2018-10-25       Impact factor: 1.355

7.  Cell-Free Total Biosynthesis of Plant Terpene Natural Products using an Orthogonal Cofactor Regeneration System.

Authors:  Undramaa Bat-Erdene; John M Billingsley; William C Turner; Benjamin R Lichman; Francesca M Ippoliti; Neil K Garg; Sarah E O'Connor; Yi Tang
Journal:  ACS Catal       Date:  2021-07-23       Impact factor: 13.084

Review 8.  Expanding the boundary of biocatalysis: design and optimization of in vitro tandem catalytic reactions for biochemical production.

Authors:  Yajie Wang; Hengqian Ren; Huimin Zhao
Journal:  Crit Rev Biochem Mol Biol       Date:  2018-02-07       Impact factor: 8.250

9.  Alleviating Redox Imbalance Enhances 7-Dehydrocholesterol Production in Engineered Saccharomyces cerevisiae.

Authors:  Wan Su; Wen-Hai Xiao; Ying Wang; Duo Liu; Xiao Zhou; Ying-Jin Yuan
Journal:  PLoS One       Date:  2015-06-22       Impact factor: 3.240

Review 10.  Recent trends in biocatalysis.

Authors:  Dong Yi; Thomas Bayer; Christoffel P S Badenhorst; Shuke Wu; Mark Doerr; Matthias Höhne; Uwe T Bornscheuer
Journal:  Chem Soc Rev       Date:  2021-06-18       Impact factor: 60.615

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