Literature DB >> 25848024

Virus decomposition provides an important contribution to benthic deep-sea ecosystem functioning.

Antonio Dell'Anno1, Cinzia Corinaldesi2, Roberto Danovaro3.   

Abstract

Viruses are key biological agents of prokaryotic mortality in the world oceans, particularly in deep-sea ecosystems where nearly all of the prokaryotic C production is transformed into organic detritus. However, the extent to which the decomposition of viral particles (i.e., organic material of viral origin) influences the functioning of benthic deep-sea ecosystems remains completely unknown. Here, using various independent approaches, we show that in deep-sea sediments an important fraction of viruses, once they are released by cell lysis, undergo fast decomposition. Virus decomposition rates in deep-sea sediments are high even at abyssal depths and are controlled primarily by the extracellular enzymatic activities that hydrolyze the proteins of the viral capsids. We estimate that on a global scale the decomposition of benthic viruses releases ∼37-50 megatons of C per year and thus represents an important source of labile organic compounds in deep-sea ecosystems. Organic material released from decomposed viruses is equivalent to 3 ± 1%, 6 ± 2%, and 12 ± 3% of the input of photosynthetically produced C, N, and P supplied through particles sinking to bathyal/abyssal sediments. Our data indicate that the decomposition of viruses provides an important, previously ignored contribution to deep-sea ecosystem functioning and has an important role in nutrient cycling within the largest ecosystem of the biosphere.

Entities:  

Keywords:  deep-sea ecosystems; ecosystem functioning; virus–prokaryote interactions

Mesh:

Substances:

Year:  2015        PMID: 25848024      PMCID: PMC4413343          DOI: 10.1073/pnas.1422234112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Determination of virus abundance in marine sediments.

Authors:  R Danovaro; A Dell'Anno; A Trucco; M Serresi; S Vanucci
Journal:  Appl Environ Microbiol       Date:  2001-03       Impact factor: 4.792

2.  Viriobenthos production and virioplankton sorptive scavenging by suspended sediment particles in coastal and pelagic waters.

Authors:  I Hewson; J A Fuhrman
Journal:  Microb Ecol       Date:  2003-09-17       Impact factor: 4.552

3.  Effects of deposit-feeding macrofauna on benthic bacteria, viruses, and protozoa in a silty freshwater sediment.

Authors:  Claudia Wieltschnig; Ulrike R Fischer; Branko Velimirov; Alexander K T Kirschner
Journal:  Microb Ecol       Date:  2007-09-19       Impact factor: 4.552

Review 4.  Feast and famine--microbial life in the deep-sea bed.

Authors:  Bo Barker Jørgensen; Antje Boetius
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

Review 5.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

Review 6.  Abyssal food limitation, ecosystem structure and climate change.

Authors:  Craig R Smith; Fabio C De Leo; Angelo F Bernardino; Andrew K Sweetman; Pedro Martinez Arbizu
Journal:  Trends Ecol Evol       Date:  2008-06-26       Impact factor: 17.712

Review 7.  Challenging the paradigms of deep-sea ecology.

Authors:  Roberto Danovaro; Paul V R Snelgrove; Paul Tyler
Journal:  Trends Ecol Evol       Date:  2014-07-04       Impact factor: 17.712

8.  The elemental composition of virus particles: implications for marine biogeochemical cycles.

Authors:  Luis F Jover; T Chad Effler; Alison Buchan; Steven W Wilhelm; Joshua S Weitz
Journal:  Nat Rev Microbiol       Date:  2014-07       Impact factor: 60.633

9.  Viral abundance, decay, and diversity in the meso- and bathypelagic waters of the north atlantic.

Authors:  Verónica Parada; Eva Sintes; Hendrik M van Aken; Markus G Weinbauer; Gerhard J Herndl
Journal:  Appl Environ Microbiol       Date:  2007-05-11       Impact factor: 4.792

10.  Viruses' life history: towards a mechanistic basis of a trade-off between survival and reproduction among phages.

Authors:  Marianne De Paepe; François Taddei
Journal:  PLoS Biol       Date:  2006-07       Impact factor: 8.029

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  32 in total

1.  Diversity and distribution of viruses inhabiting the deepest ocean on Earth.

Authors:  Huahua Jian; Yi Yi; Jiahua Wang; Yali Hao; Mujie Zhang; Siyuan Wang; Canxing Meng; Yue Zhang; Hongmei Jing; Yinzhao Wang; Xiang Xiao
Journal:  ISME J       Date:  2021-05-10       Impact factor: 11.217

2.  Reduced bacterial mortality and enhanced viral productivity during sinking in the ocean.

Authors:  Wei Wei; Xiaowei Chen; Markus G Weinbauer; Nianzhi Jiao; Rui Zhang
Journal:  ISME J       Date:  2022-04-01       Impact factor: 11.217

3.  Long 5' untranslated regions regulate the RNA stability of the deep-sea filamentous phage SW1.

Authors:  Huahua Jian; Lei Xiong; Guanpeng Xu; Xiang Xiao; Fengping Wang
Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

4.  Assessing viral taxonomic composition in benthic marine ecosystems: reliability and efficiency of different bioinformatic tools for viral metagenomic analyses.

Authors:  M Tangherlini; A Dell'Anno; L Zeigler Allen; G Riccioni; C Corinaldesi
Journal:  Sci Rep       Date:  2016-06-22       Impact factor: 4.379

Review 5.  An Appraisal of Bacteriophage Isolation Techniques from Environment.

Authors:  Aparna Nair; Gaurav S Ghugare; Krishna Khairnar
Journal:  Microb Ecol       Date:  2021-06-17       Impact factor: 4.552

6.  Impact of CO2 leakage from sub-seabed carbon dioxide capture and storage (CCS) reservoirs on benthic virus-prokaryote interactions and functions.

Authors:  Eugenio Rastelli; Cinzia Corinaldesi; Antonio Dell'Anno; Teresa Amaro; Ana M Queirós; Stephen Widdicombe; Roberto Danovaro
Journal:  Front Microbiol       Date:  2015-09-07       Impact factor: 5.640

7.  Evaluation of Tangential Flow Filtration for the Concentration and Separation of Bacteria and Viruses in Contrasting Marine Environments.

Authors:  Lanlan Cai; Yunlan Yang; Nianzhi Jiao; Rui Zhang
Journal:  PLoS One       Date:  2015-08-25       Impact factor: 3.240

8.  Viral Impact on Prokaryotic and Microalgal Activities in the Microphytobenthic Biofilm of an Intertidal Mudflat (French Atlantic Coast).

Authors:  Hélène Montanié; Margot G De Crignis; Johann Lavaud
Journal:  Front Microbiol       Date:  2015-11-10       Impact factor: 5.640

9.  Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat.

Authors:  Flore Ballaud; Alexis Dufresne; André-Jean Francez; Jonathan Colombet; Télesphore Sime-Ngando; Achim Quaiser
Journal:  Front Microbiol       Date:  2016-01-06       Impact factor: 5.640

10.  Virus-mediated archaeal hecatomb in the deep seafloor.

Authors:  Roberto Danovaro; Antonio Dell'Anno; Cinzia Corinaldesi; Eugenio Rastelli; Ricardo Cavicchioli; Mart Krupovic; Rachel T Noble; Takuro Nunoura; David Prangishvili
Journal:  Sci Adv       Date:  2016-10-12       Impact factor: 14.136

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