Literature DB >> 20962334

Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.

Alina Ionel1, Javier A Velázquez-Muriel, Daniel Luque, Ana Cuervo, José R Castón, José M Valpuesta, Jaime Martín-Benito, José L Carrascosa.   

Abstract

Maturation of dsDNA bacteriophages involves assembling the virus prohead from a limited set of structural components followed by rearrangements required for the stability that is necessary for infecting a host under challenging environmental conditions. Here, we determine the mature capsid structure of T7 at 1 nm resolution by cryo-electron microscopy and compare it with the prohead to reveal the molecular basis of T7 shell maturation. The mature capsid presents an expanded and thinner shell, with a drastic rearrangement of the major protein monomers that increases in their interacting surfaces, in turn resulting in a new bonding lattice. The rearrangements include tilting, in-plane rotation, and radial expansion of the subunits, as well as a relative bending of the A- and P-domains of each subunit. The unique features of this shell transformation, which does not employ the accessory proteins, inserted domains, or molecular interactions observed in other phages, suggest a simple capsid assembling strategy that may have appeared early in the evolution of these viruses.

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Year:  2010        PMID: 20962334      PMCID: PMC3012979          DOI: 10.1074/jbc.M110.187211

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

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4.  Sharpening high resolution information in single particle electron cryomicroscopy.

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5.  Image processing for electron microscopy single-particle analysis using XMIPP.

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6.  Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus.

Authors:  Wen Jiang; Juan Chang; Joanita Jakana; Peter Weigele; Jonathan King; Wah Chiu
Journal:  Nature       Date:  2006-02-02       Impact factor: 49.962

7.  Quasi-atomic model of bacteriophage t7 procapsid shell: insights into the structure and evolution of a basic fold.

Authors:  Xabier Agirrezabala; Javier A Velázquez-Muriel; Paulino Gómez-Puertas; Sjors H W Scheres; José M Carazo; José L Carrascosa
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8.  Visualization of alpha-helices in a 6-angstrom resolution cryoelectron microscopy structure of adenovirus allows refinement of capsid protein assignments.

Authors:  Susan D Saban; Mariena Silvestry; Glen R Nemerow; Phoebe L Stewart
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

9.  Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.

Authors:  Gabriel C Lander; Alex Evilevitch; Meerim Jeembaeva; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Structure       Date:  2008-09-10       Impact factor: 5.006

10.  An unexpected twist in viral capsid maturation.

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  28 in total

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Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

Review 2.  Procapsid assembly, maturation, nuclear exit: dynamic steps in the production of infectious herpesvirions.

Authors:  Giovanni Cardone; J Bernard Heymann; Naiqian Cheng; Benes L Trus; Alasdair C Steven
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

3.  Structure of the receptor-binding carboxy-terminal domain of bacteriophage T7 tail fibers.

Authors:  Carmela Garcia-Doval; Mark J van Raaij
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

4.  Label-free identification of single dielectric nanoparticles and viruses with ultraweak polarization forces.

Authors:  Laura Fumagalli; Daniel Esteban-Ferrer; Ana Cuervo; Jose L Carrascosa; Gabriel Gomila
Journal:  Nat Mater       Date:  2012-07-08       Impact factor: 43.841

5.  Sequence and structural characterization of great salt lake bacteriophage CW02, a member of the T7-like supergroup.

Authors:  Peter S Shen; Matthew J Domek; Eduardo Sanz-García; Aman Makaju; Ryan M Taylor; Ryan Hoggan; Michele D Culumber; Craig J Oberg; Donald P Breakwell; John T Prince; David M Belnap
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

6.  Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.

Authors:  Matthew L Baker; Corey F Hryc; Qinfen Zhang; Weimin Wu; Joanita Jakana; Cameron Haase-Pettingell; Pavel V Afonine; Paul D Adams; Jonathan A King; Wen Jiang; Wah Chiu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-09       Impact factor: 11.205

7.  Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions.

Authors:  Fei Guo; Zheng Liu; Ping-An Fang; Qinfen Zhang; Elena T Wright; Weimin Wu; Ci Zhang; Frank Vago; Yue Ren; Joanita Jakana; Wah Chiu; Philip Serwer; Wen Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-13       Impact factor: 11.205

8.  Large terminase conformational change induced by connector binding in bacteriophage T7.

Authors:  María I Daudén; Jaime Martín-Benito; Juan C Sánchez-Ferrero; Mar Pulido-Cid; José M Valpuesta; José L Carrascosa
Journal:  J Biol Chem       Date:  2013-04-30       Impact factor: 5.157

Review 9.  Bacteriophage vehicles for phage display: biology, mechanism, and application.

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Journal:  Curr Microbiol       Date:  2014-03-18       Impact factor: 2.188

10.  Transient contacts on the exterior of the HK97 procapsid that are essential for capsid assembly.

Authors:  Dan-ju Tso; Roger W Hendrix; Robert L Duda
Journal:  J Mol Biol       Date:  2014-03-20       Impact factor: 5.469

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