Literature DB >> 24914964

The first structure of a bacterial diterpene cyclase: CotB2.

Ronja Janke1, Christian Görner2, Max Hirte2, Thomas Brück2, Bernhard Loll1.   

Abstract

Sesquiterpenes and diterpenes are a diverse class of secondary metabolites that are predominantly derived from plants and some prokaryotes. The properties of these natural products encompass antitumor, antibiotic and even insecticidal activities. Therefore, they are interesting commercial targets for the chemical and pharmaceutical industries. Owing to their structural complexity, these compounds are more efficiently accessed by metabolic engineering of microbial systems than by chemical synthesis. This work presents the first crystal structure of a bacterial diterpene cyclase, CotB2 from the soil bacterium Streptomyces melanosporofaciens, at 1.64 Å resolution. CotB2 is a diterpene cyclase that catalyzes the cyclization of the linear geranylgeranyl diphosphate to the tricyclic cyclooctat-9-en-7-ol. The subsequent oxidation of cyclooctat-9-en-7-ol by two cytochrome P450 monooxygenases leads to bioactive cyclooctatin. Plasticity residues that decorate the active site of CotB2 have been mutated, resulting in alternative monocyclic, dicyclic and tricyclic compounds that show bioactivity. These new compounds shed new light on diterpene cyclase reaction mechanisms. Furthermore, the product of mutant CotB2(W288G) produced the new antibiotic compound (1R,3E,7E,11S,12S)-3,7,18-dolabellatriene, which acts specifically against multidrug-resistant Staphylococcus aureus. This opens a sustainable route for the industrial-scale production of this bioactive compound.

Entities:  

Keywords:  biocatalysis of R-cembrene A and dolabellatriene; cyclooctatin; diterpene cyclase; terpenoids; white biotechnology

Mesh:

Substances:

Year:  2014        PMID: 24914964     DOI: 10.1107/S1399004714005513

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  19 in total

Review 1.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

2.  Exploring the Influence of Domain Architecture on the Catalytic Function of Diterpene Synthases.

Authors:  Travis A Pemberton; Mengbin Chen; Golda G Harris; Wayne K W Chou; Lian Duan; Mustafa Köksal; Alex S Genshaft; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2017-03-31       Impact factor: 3.162

3.  Crystal Structure and Mechanistic Molecular Modeling Studies of Mycobacterium tuberculosis Diterpene Cyclase Rv3377c.

Authors:  Yue Zhang; Lisa M Prach; Terrence E O'Brien; Frank DiMaio; Daniil M Prigozhin; Jacob E Corn; Tom Alber; Justin B Siegel; Dean J Tantillo
Journal:  Biochemistry       Date:  2020-11-12       Impact factor: 3.162

4.  Crystallization and X-ray diffraction analysis of a putative bacterial class I labdane-related diterpene synthase.

Authors:  Hugo Serrano-Posada; Sara Centeno-Leija; Sonia Rojas-Trejo; Vivian Stojanoff; Romina Rodríguez-Sanoja; Enrique Rudiño-Piñera; Sergio Sánchez
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-08-25       Impact factor: 1.056

5.  Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase.

Authors:  Mengbin Chen; Wayne K W Chou; Tomonobu Toyomasu; David E Cane; David W Christianson
Journal:  ACS Chem Biol       Date:  2016-01-06       Impact factor: 5.100

Review 6.  Multi-domain terpenoid cyclase architecture and prospects for proximity in bifunctional catalysis.

Authors:  Mengbin Chen; Golda G Harris; Travis A Pemberton; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2016-06-07       Impact factor: 6.809

7.  Identification of amino acid networks governing catalysis in the closed complex of class I terpene synthases.

Authors:  Patrick Schrepfer; Alexander Buettner; Christian Goerner; Michael Hertel; Jeaphianne van Rijn; Frank Wallrapp; Wolfgang Eisenreich; Volker Sieber; Robert Kourist; Thomas Brück
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-03       Impact factor: 11.205

8.  Genome mining of the sordarin biosynthetic gene cluster from Sordaria araneosa Cain ATCC 36386: characterization of cycloaraneosene synthase and GDP-6-deoxyaltrose transferase.

Authors:  Fumitaka Kudo; Yasunori Matsuura; Takaaki Hayashi; Masayuki Fukushima; Tadashi Eguchi
Journal:  J Antibiot (Tokyo)       Date:  2016-04-13       Impact factor: 2.649

9.  Identification, characterization and molecular adaptation of class I redox systems for the production of hydroxylated diterpenoids.

Authors:  Christian Görner; Patrick Schrepfer; Veronika Redai; Frank Wallrapp; Bernhard Loll; Wolfgang Eisenreich; Martin Haslbeck; Thomas Brück
Journal:  Microb Cell Fact       Date:  2016-05-23       Impact factor: 5.328

10.  Stereoselective chemo-enzymatic oxidation routes for (1R,3E,7E,11S,12S)-3,7,18-dolabellatriene.

Authors:  Christian Görner; Max Hirte; Stephanie Huber; Patrick Schrepfer; Thomas Brück
Journal:  Front Microbiol       Date:  2015-10-13       Impact factor: 5.640

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