Literature DB >> 24911490

The International Cancer Genome Consortium's evolving data-protection policies.

Djims Milius1, Edward S Dove1, Donald Chalmers2, Stephanie O M Dyke3, Kazuto Kato4, Pilar Nicolás5, B F Francis Ouellette6, Brad Ozenberger7, Laura L Rodriguez7, Nikolajs Zeps8, Yann Joly1.   

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Year:  2014        PMID: 24911490     DOI: 10.1038/nbt.2926

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


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  19 in total

1.  Bayesian method to predict individual SNP genotypes from gene expression data.

Authors:  Eric E Schadt; Sangsoon Woo; Ke Hao
Journal:  Nat Genet       Date:  2012-05       Impact factor: 38.330

2.  Securing the data economy: translating privacy and enacting security in the development of DataSHIELD.

Authors:  M J Murtagh; I Demir; K N Jenkings; S E Wallace; B Murtagh; M Boniol; M Bota; P Laflamme; P Boffetta; V Ferretti; P R Burton
Journal:  Public Health Genomics       Date:  2012-06-20       Impact factor: 2.000

3.  Selection of twenty-four highly informative SNP markers for human identification and paternity analysis in Koreans.

Authors:  Hwan Young Lee; Myung Jin Park; Ji-Eun Yoo; Ukhee Chung; Gil-Ro Han; Kyoung-Jin Shin
Journal:  Forensic Sci Int       Date:  2005-03-10       Impact factor: 2.395

4.  The NCBI dbGaP database of genotypes and phenotypes.

Authors:  Matthew D Mailman; Michael Feolo; Yumi Jin; Masato Kimura; Kimberly Tryka; Rinat Bagoutdinov; Luning Hao; Anne Kiang; Justin Paschall; Lon Phan; Natalia Popova; Stephanie Pretel; Lora Ziyabari; Moira Lee; Yu Shao; Zhen Y Wang; Karl Sirotkin; Minghong Ward; Michael Kholodov; Kerry Zbicz; Jeffrey Beck; Michael Kimelman; Sergey Shevelev; Don Preuss; Eugene Yaschenko; Alan Graeff; James Ostell; Stephen T Sherry
Journal:  Nat Genet       Date:  2007-10       Impact factor: 38.330

5.  Questioning the limits of genomic privacy.

Authors:  Bartha M Knoppers; Edward S Dove; Jan-Eric Litton; J J Nietfeld
Journal:  Am J Hum Genet       Date:  2012-09-07       Impact factor: 11.025

6.  On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.

Authors:  Hae Kyung Im; Eric R Gamazon; Dan L Nicolae; Nancy J Cox
Journal:  Am J Hum Genet       Date:  2012-03-28       Impact factor: 11.025

7.  Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles.

Authors:  Henry Rodriguez; Mike Snyder; Mathias Uhlén; Phil Andrews; Ronald Beavis; Christoph Borchers; Robert J Chalkley; Sang Yun Cho; Katie Cottingham; Michael Dunn; Tomasz Dylag; Ron Edgar; Peter Hare; Albert J R Heck; Roland F Hirsch; Karen Kennedy; Patrik Kolar; Hans-Joachim Kraus; Parag Mallick; Alexey Nesvizhskii; Peipei Ping; Fredrik Pontén; Liming Yang; John R Yates; Stephen E Stein; Henning Hermjakob; Christopher R Kinsinger; Rolf Apweiler
Journal:  J Proteome Res       Date:  2009-07       Impact factor: 4.466

8.  Prepublication data sharing.

Authors:  Ewan Birney; Thomas J Hudson; Eric D Green; Chris Gunter; Sean Eddy; Jane Rogers; Jennifer R Harris; S Dusko Ehrlich; Rolf Apweiler; Christopher P Austin; Lisa Berglund; Martin Bobrow; Chas Bountra; Anthony J Brookes; Anne Cambon-Thomsen; Nigel P Carter; Rex L Chisholm; Jorge L Contreras; Robert M Cooke; William L Crosby; Ken Dewar; Richard Durbin; Stephanie O M Dyke; Joseph R Ecker; Khaled El Emam; Lars Feuk; Stacey B Gabriel; John Gallacher; William M Gelbart; Antoni Granell; Francisco Guarner; Tim Hubbard; Scott A Jackson; Jennifer L Jennings; Yann Joly; Steven M Jones; Jane Kaye; Karen L Kennedy; Bartha Maria Knoppers; Nikos C Kyrpides; William W Lowrance; Jingchu Luo; John J MacKay; Luis Martín-Rivera; W Richard McCombie; John D McPherson; Linda Miller; Webb Miller; Don Moerman; Vincent Mooser; Cynthia C Morton; James M Ostell; B F Francis Ouellette; Julian Parkhill; Parminder S Raina; Christopher Rawlings; Steven E Scherer; Stephen W Scherer; Paul N Schofield; Christoph W Sensen; Victoria C Stodden; Michael R Sussman; Toshihiro Tanaka; Janet Thornton; Tatsuhiko Tsunoda; David Valle; Eero I Vuorio; Neil M Walker; Susan Wallace; George Weinstock; William B Whitman; Kim C Worley; Cathy Wu; Jiayan Wu; Jun Yu
Journal:  Nature       Date:  2009-09-10       Impact factor: 49.962

9.  Data sharing in the post-genomic world: the experience of the International Cancer Genome Consortium (ICGC) Data Access Compliance Office (DACO).

Authors:  Yann Joly; Edward S Dove; Bartha M Knoppers; Martin Bobrow; Don Chalmers
Journal:  PLoS Comput Biol       Date:  2012-07-12       Impact factor: 4.475

10.  Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.

Authors:  Nils Homer; Szabolcs Szelinger; Margot Redman; David Duggan; Waibhav Tembe; Jill Muehling; John V Pearson; Dietrich A Stephan; Stanley F Nelson; David W Craig
Journal:  PLoS Genet       Date:  2008-08-29       Impact factor: 5.917

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  9 in total

1.  Privacy and security in the era of digital health: what should translational researchers know and do about it?

Authors:  Barbara L Filkins; Ju Young Kim; Bruce Roberts; Winston Armstrong; Mark A Miller; Michael L Hultner; Anthony P Castillo; Jean-Christophe Ducom; Eric J Topol; Steven R Steinhubl
Journal:  Am J Transl Res       Date:  2016-03-15       Impact factor: 4.060

Review 2.  Personal Mutanomes Meet Modern Oncology Drug Discovery and Precision Health.

Authors:  Feixiong Cheng; Han Liang; Atul J Butte; Charis Eng; Ruth Nussinov
Journal:  Pharmacol Rev       Date:  2018-12-13       Impact factor: 25.468

Review 3.  Bioinformatic approaches to augment study of epithelial-to-mesenchymal transition in lung cancer.

Authors:  Tim N Beck; Adaeze J Chikwem; Nehal R Solanki; Erica A Golemis
Journal:  Physiol Genomics       Date:  2014-08-05       Impact factor: 3.107

4.  Editorial: Clinical Genome Sequencing: Bioinformatics Challenges and Key Considerations.

Authors:  Shulan Tian; Zheng Jin Tu; Huihuang Yan; Eric W Klee
Journal:  Front Genet       Date:  2022-03-31       Impact factor: 4.599

5.  Risk of re-identification of epigenetic methylation data: a more nuanced response is needed.

Authors:  Yann Joly; Stephanie Om Dyke; Warren A Cheung; Mark A Rothstein; Tomi Pastinen
Journal:  Clin Epigenetics       Date:  2015-04-18       Impact factor: 6.551

6.  Epigenome data release: a participant-centered approach to privacy protection.

Authors:  Stephanie O M Dyke; Warren A Cheung; Yann Joly; Ole Ammerpohl; Pavlo Lutsik; Mark A Rothstein; Maxime Caron; Stephan Busche; Guillaume Bourque; Lars Rönnblom; Paul Flicek; Stephan Beck; Martin Hirst; Henk Stunnenberg; Reiner Siebert; Jörn Walter; Tomi Pastinen
Journal:  Genome Biol       Date:  2015-07-17       Impact factor: 13.583

7.  Evolving data access policy: The Canadian context.

Authors:  Stephanie O M Dyke; Katie M Saulnier; Tomi Pastinen; Guillaume Bourque; Yann Joly
Journal:  Facets (Ott)       Date:  2016-09-15

Review 8.  Privacy Protection and Secondary Use of Health Data: Strategies and Methods.

Authors:  Dingyi Xiang; Wei Cai
Journal:  Biomed Res Int       Date:  2021-10-07       Impact factor: 3.411

Review 9.  Brain Tumor Characterization Using Radiogenomics in Artificial Intelligence Framework.

Authors:  Biswajit Jena; Sanjay Saxena; Gopal Krishna Nayak; Antonella Balestrieri; Neha Gupta; Narinder N Khanna; John R Laird; Manudeep K Kalra; Mostafa M Fouda; Luca Saba; Jasjit S Suri
Journal:  Cancers (Basel)       Date:  2022-08-22       Impact factor: 6.575

  9 in total

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