Literature DB >> 24900427

Inhibitors of the NAD(+)-Dependent Protein Desuccinylase and Demalonylase Sirt5.

Benjamin Maurer1, Tobias Rumpf1, Michael Scharfe2, Diana A Stolfa1, Martin L Schmitt1, Wenjuan He3, Eric Verdin3, Wolfgang Sippl2, Manfred Jung1.   

Abstract

NAD(+)-dependent histone deacetylases (sirtuins) play important roles in epigenetic regulation but also through nonhistone substrates for other key cellular events and have been linked to the pathogenesis of cancer, neurodegeneration, and metabolic diseases. The subtype Sirt5 has been shown recently to act as a desuccinylating and demalonylating enzyme. We have established an assay for biochemical testing of Sirt5 using a small labeled succinylated lysine derivative. We present a comparative study on the profiling of several established sirtuin inhibitors on Sirt1-3 as well as Sirt5 and also present initial results on a screening for new compounds that block Sirt5. Thiobarbiturates were identified as new Sirt5 inhibitors in the low micromolar range, which are selective over Sirt3 that can be found in the same cell compartment as Sirt5.

Entities:  

Keywords:  AMC assay; Sirt5; desuccinylation; sirtinol; sirtuin

Year:  2012        PMID: 24900427      PMCID: PMC4025838          DOI: 10.1021/ml3002709

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  23 in total

1.  An enzymatic activity in the yeast Sir2 protein that is essential for gene silencing.

Authors:  J C Tanny; G J Dowd; J Huang; H Hilz; D Moazed
Journal:  Cell       Date:  1999-12-23       Impact factor: 41.582

2.  In vitro assays for the determination of histone deacetylase activity.

Authors:  Birgit Heltweg; Johannes Trapp; Manfred Jung
Journal:  Methods       Date:  2005-08       Impact factor: 3.608

3.  Adenosine mimetics as inhibitors of NAD+-dependent histone deacetylases, from kinase to sirtuin inhibition.

Authors:  Johannes Trapp; Anne Jochum; Rene Meier; Laura Saunders; Brett Marshall; Conrad Kunick; Eric Verdin; Peter Goekjian; Wolfgang Sippl; Manfred Jung
Journal:  J Med Chem       Date:  2006-12-14       Impact factor: 7.446

4.  Old enzymes, new tricks: sirtuins are NAD(+)-dependent de-acylases.

Authors:  Matthew D Hirschey
Journal:  Cell Metab       Date:  2011-11-17       Impact factor: 27.287

5.  Characterization of five human cDNAs with homology to the yeast SIR2 gene: Sir2-like proteins (sirtuins) metabolize NAD and may have protein ADP-ribosyltransferase activity.

Authors:  R A Frye
Journal:  Biochem Biophys Res Commun       Date:  1999-06-24       Impact factor: 3.575

Review 6.  Inhibitors to understand molecular mechanisms of NAD(+)-dependent deacetylases (sirtuins).

Authors:  Michael Lawson; Urszula Uciechowska; Jörg Schemies; Tobias Rumpf; Manfred Jung; Wolfgang Sippl
Journal:  Biochim Biophys Acta       Date:  2010-06-23

7.  Antitumor activity of a small-molecule inhibitor of human silent information regulator 2 enzymes.

Authors:  Birgit Heltweg; Tonibelle Gatbonton; Aaron D Schuler; Jeff Posakony; Hongzhe Li; Sondra Goehle; Ramya Kollipara; Ronald A Depinho; Yansong Gu; Julian A Simon; Antonio Bedalov
Journal:  Cancer Res       Date:  2006-04-15       Impact factor: 12.701

8.  Small molecule activators of sirtuins extend Saccharomyces cerevisiae lifespan.

Authors:  Konrad T Howitz; Kevin J Bitterman; Haim Y Cohen; Dudley W Lamming; Siva Lavu; Jason G Wood; Robert E Zipkin; Phuong Chung; Anne Kisielewski; Li-Li Zhang; Brandy Scherer; David A Sinclair
Journal:  Nature       Date:  2003-08-24       Impact factor: 49.962

9.  Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.

Authors:  Jintang Du; Yeyun Zhou; Xiaoyang Su; Jiu Jiu Yu; Saba Khan; Hong Jiang; Jungwoo Kim; Jimin Woo; Jun Huyn Kim; Brian Hyun Choi; Bin He; Wei Chen; Sheng Zhang; Richard A Cerione; Johan Auwerx; Quan Hao; Hening Lin
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

10.  Structural insights into intermediate steps in the Sir2 deacetylation reaction.

Authors:  William F Hawse; Kevin G Hoff; David G Fatkins; Alison Daines; Olga V Zubkova; Vern L Schramm; Weiping Zheng; Cynthia Wolberger
Journal:  Structure       Date:  2008-09-10       Impact factor: 5.006

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  24 in total

1.  Intracellular nicotinamide adenine dinucleotide promotes TNF-induced necroptosis in a sirtuin-dependent manner.

Authors:  N Preyat; M Rossi; J Kers; L Chen; J Bertin; P J Gough; A Le Moine; A Rongvaux; F Van Gool; O Leo
Journal:  Cell Death Differ       Date:  2015-05-22       Impact factor: 15.828

2.  Emerging Roles for SIRT5 in Metabolism and Cancer.

Authors:  Lauren R Bringman-Rodenbarger; Angela H Guo; Costas A Lyssiotis; David B Lombard
Journal:  Antioxid Redox Signal       Date:  2017-10-26       Impact factor: 8.401

Review 3.  Using mitochondrial sirtuins as drug targets: disease implications and available compounds.

Authors:  Melanie Gertz; Clemens Steegborn
Journal:  Cell Mol Life Sci       Date:  2016-03-23       Impact factor: 9.261

Review 4.  Sirtuin activators and inhibitors: Promises, achievements, and challenges.

Authors:  Han Dai; David A Sinclair; James L Ellis; Clemens Steegborn
Journal:  Pharmacol Ther       Date:  2018-03-22       Impact factor: 12.310

5.  Molecular Imaging of Sirtuin1 Expression-Activity in Rat Brain Using Positron-Emission Tomography-Magnetic-Resonance Imaging with [18F]-2-Fluorobenzoylaminohexanoicanilide.

Authors:  Robin Bonomi; Vadim Popov; Maxwell T Laws; David Gelovani; Anjoy Majhi; Aleksandr Shavrin; Xin Lu; Otto Muzik; Nashaat Turkman; Renshyan Liu; Thomas Mangner; Juri G Gelovani
Journal:  J Med Chem       Date:  2018-08-13       Impact factor: 7.446

Review 6.  Succinylation Links Metabolism to Protein Functions.

Authors:  Yun Yang; Gary E Gibson
Journal:  Neurochem Res       Date:  2019-03-22       Impact factor: 3.996

7.  An improved fluorogenic assay for SIRT1, SIRT2, and SIRT3.

Authors:  Ying-Ling Chiang; Hening Lin
Journal:  Org Biomol Chem       Date:  2016-01-21       Impact factor: 3.876

8.  Identification of sirtuin 5 inhibitors by ultrafast microchip electrophoresis using nanoliter volume samples.

Authors:  Erik D Guetschow; Surinder Kumar; David B Lombard; Robert T Kennedy
Journal:  Anal Bioanal Chem       Date:  2015-12-03       Impact factor: 4.142

Review 9.  Functions of the sirtuin deacylase SIRT5 in normal physiology and pathobiology.

Authors:  Surinder Kumar; David B Lombard
Journal:  Crit Rev Biochem Mol Biol       Date:  2018-04-11       Impact factor: 8.250

10.  SIRT5 IS A DRUGGABLE METABOLIC VULNERABILITY IN ACUTE MYELOID LEUKEMIA.

Authors:  Anca Franzini; Anthony D Pomicter; Dongqing Yan; Brayden J Halverson; Orlando Antelope; Clinton C Mason; Jonathan M Ahmann; Anna V Senina; Nadeem A Vellore; Courtney L Jones; Matthew S Zabriskie; Hein Than; Michael J Xiao; Alexandria van Scoyk; Ami B Patel; Phillip M Clair; William L Heaton; Shawn C Owen; Joshua L Andersen; Christina M Egbert; Julie A Reisz; Angelo D'Alessandro; James E Cox; Kevin C Gantz; Hannah M Redwine; Siddharth M Iyer; Jamshid S Khorashad; Nima Rajabi; Christian A Olsen; Thomas O'Hare; Michael W Deininger
Journal:  Blood Cancer Discov       Date:  2019-12-02
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