Literature DB >> 26796034

An improved fluorogenic assay for SIRT1, SIRT2, and SIRT3.

Ying-Ling Chiang1, Hening Lin.   

Abstract

Sirtuins are NAD-dependent lysine deacylases that play critical roles in cellular regulation and are implicated in human diseases. Modulators of sirtuins are needed as tools for investigating their biological functions and possible therapeutic applications. However, the discovery of sirtuin modulators is hampered by the lack of efficient sirtuin assays. Here we report an improved fluorogenic assay for SIRT1, SIRT2, and SIRT3 using a new substrate, a myristoyl peptide with a C-terminal aminocoumarin. The new assay has several advantages, including significantly lower substrate concentration needed, increased signal-to-background ratio, and improved Z'-factor. The novel assay thus will expedite high-throughput screening of SIRT1, SIRT2, and SIRT3 modulators.

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Year:  2016        PMID: 26796034      PMCID: PMC4860349          DOI: 10.1039/c5ob02609a

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  45 in total

Review 1.  Quantitative assays for characterization of the Sir2 family of NAD(+)-dependent deacetylases.

Authors:  Margie T Borra; John M Denu
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

Review 2.  Sirtuin activators and inhibitors.

Authors:  José M Villalba; Francisco J Alcaín
Journal:  Biofactors       Date:  2012-06-25       Impact factor: 6.113

3.  Activation of the protein deacetylase SIRT6 by long-chain fatty acids and widespread deacylation by mammalian sirtuins.

Authors:  Jessica L Feldman; Josue Baeza; John M Denu
Journal:  J Biol Chem       Date:  2013-09-18       Impact factor: 5.157

Review 4.  Sirtuins as regulators of metabolism and healthspan.

Authors:  Riekelt H Houtkooper; Eija Pirinen; Johan Auwerx
Journal:  Nat Rev Mol Cell Biol       Date:  2012-03-07       Impact factor: 94.444

5.  Mechanism of human SIRT1 activation by resveratrol.

Authors:  Margie T Borra; Brian C Smith; John M Denu
Journal:  J Biol Chem       Date:  2005-03-04       Impact factor: 5.157

6.  Small molecule activators of sirtuins extend Saccharomyces cerevisiae lifespan.

Authors:  Konrad T Howitz; Kevin J Bitterman; Haim Y Cohen; Dudley W Lamming; Siva Lavu; Jason G Wood; Robert E Zipkin; Phuong Chung; Anne Kisielewski; Li-Li Zhang; Brandy Scherer; David A Sinclair
Journal:  Nature       Date:  2003-08-24       Impact factor: 49.962

Review 7.  Sirtuin inhibitors as anticancer agents.

Authors:  Jing Hu; Hui Jing; Hening Lin
Journal:  Future Med Chem       Date:  2014-05       Impact factor: 3.808

Review 8.  Sorting out functions of sirtuins in cancer.

Authors:  M Roth; W Y Chen
Journal:  Oncogene       Date:  2013-04-22       Impact factor: 9.867

9.  Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.

Authors:  Jintang Du; Yeyun Zhou; Xiaoyang Su; Jiu Jiu Yu; Saba Khan; Hong Jiang; Jungwoo Kim; Jimin Woo; Jun Huyn Kim; Brian Hyun Choi; Bin He; Wei Chen; Sheng Zhang; Richard A Cerione; Johan Auwerx; Quan Hao; Hening Lin
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

10.  Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.

Authors:  Tobias Rumpf; Matthias Schiedel; Berin Karaman; Claudia Roessler; Brian J North; Attila Lehotzky; Judit Oláh; Kathrin I Ladwein; Karin Schmidtkunz; Markus Gajer; Martin Pannek; Clemens Steegborn; David A Sinclair; Stefan Gerhardt; Judit Ovádi; Mike Schutkowski; Wolfgang Sippl; Oliver Einsle; Manfred Jung
Journal:  Nat Commun       Date:  2015-02-12       Impact factor: 14.919

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  12 in total

1.  Acute inhibition of protein deacetylases does not impact skeletal muscle insulin action.

Authors:  Vitor F Martins; Maedha Begur; Shivani Lakkaraju; Kristoffer Svensson; Ji Park; Byron Hetrick; Carrie E McCurdy; Simon Schenk
Journal:  Am J Physiol Cell Physiol       Date:  2019-08-28       Impact factor: 4.249

2.  Fluorogenic Assays for the Defatty-Acylase Activity of Sirtuins.

Authors:  Jun Young Hong; Ji Cao; Hening Lin
Journal:  Methods Mol Biol       Date:  2019

3.  New chemical tools for probing activity and inhibition of the NAD+-dependent lysine deacylase sirtuin 2.

Authors:  Sören Swyter; Matthias Schiedel; Daria Monaldi; Sándor Szunyogh; Attila Lehotzky; Tobias Rumpf; Judit Ovádi; Wolfgang Sippl; Manfred Jung
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-05       Impact factor: 6.237

4.  Investigating the Sensitivity of NAD+-dependent Sirtuin Deacylation Activities to NADH.

Authors:  Andreas S Madsen; Christian Andersen; Mohammad Daoud; Kristin A Anderson; Jonas S Laursen; Saswati Chakladar; Frank K Huynh; Ana R Colaço; Donald S Backos; Peter Fristrup; Matthew D Hirschey; Christian A Olsen
Journal:  J Biol Chem       Date:  2016-02-09       Impact factor: 5.157

5.  Lysine Deacetylases Exhibit Distinct Changes in Activity Profiles Due to Fluorophore Conjugation of Substrates.

Authors:  Tasha B Toro; Jenae R Bryant; Terry J Watt
Journal:  Biochemistry       Date:  2017-08-16       Impact factor: 3.162

Review 6.  The CD38 glycohydrolase and the NAD sink: implications for pathological conditions.

Authors:  Julianna D Zeidler; Kelly A Hogan; Guillermo Agorrody; Thais R Peclat; Sonu Kashyap; Karina S Kanamori; Lilian Sales Gomez; Delaram Z Mazdeh; Gina M Warner; Katie L Thompson; Claudia C S Chini; Eduardo Nunes Chini
Journal:  Am J Physiol Cell Physiol       Date:  2022-02-09       Impact factor: 4.249

7.  A Novel Substrate Radiotracer for Molecular Imaging of SIRT2 Expression and Activity with Positron Emission Tomography.

Authors:  Robin E Bonomi; Maxwell Laws; Vadim Popov; Swatabdi Kamal; Shreya Potukutchi; Aleksandr Shavrin; Xin Lu; Nashaat Turkman; Ren-Shyan Liu; Thomas Mangner; Juri G Gelovani
Journal:  Mol Imaging Biol       Date:  2018-08       Impact factor: 3.488

8.  High-throughput screening of histone deacetylases and determination of kinetic parameters using fluorogenic assays.

Authors:  Carlos Moreno-Yruela; Christian A Olsen
Journal:  STAR Protoc       Date:  2021-02-03

9.  Cyclic Peptide-Based Sirtuin Substrates.

Authors:  Di Chen; Lingling Yan; Weiping Zheng
Journal:  Molecules       Date:  2019-01-24       Impact factor: 4.411

10.  A one-step specific assay for continuous detection of sirtuin 2 activity.

Authors:  Qi Dai; Zhihua Zheng; Fan Xia; Peiqing Liu; Min Li
Journal:  Acta Pharm Sin B       Date:  2019-06-07       Impact factor: 11.413

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