Literature DB >> 30903449

Succinylation Links Metabolism to Protein Functions.

Yun Yang1, Gary E Gibson2.   

Abstract

Post-translational modifications (PTMs) are important regulators of protein function, and integrate metabolism with physiological and pathological processes. Phosphorylation and acetylation are particularly well studied PTMs. A relatively recently discovered novel PTM is succinylation in which metabolically derived succinyl CoA modifies protein lysine groups. Succinylation causes a protein charge flip from positive to negative and a relatively large increase in mass compared to other PTMs. Hundreds of protein succinylation sites are present in proteins of multiple tissues and species, and the significance is being actively investigated. The few completed studies demonstrate that succinylation alters rates of enzymes and pathways, especially mitochondrial metabolic pathways. Thus, succinylation provides an elegant and efficient mechanism to coordinate metabolism and signaling by utilizing metabolic intermediates as sensors to regulate metabolism. Even though the brain is one of the most metabolically active organs, an understanding of the role succinylation in the nervous system is largely unknown. Data from other tissues and other PTMs suggest that succinylation provides a coupling between metabolism and protein function in the nervous system and in neurological diseases. This review provides a new insight into metabolism in neurological diseases and suggests that the drug development for these diseases requires a better understanding of succinylation and de-succinylation in the brain and other tissues.

Entities:  

Keywords:  Metabolism; Mitochondria; Sirtuins; Succinlyation

Mesh:

Substances:

Year:  2019        PMID: 30903449      PMCID: PMC6755074          DOI: 10.1007/s11064-019-02780-x

Source DB:  PubMed          Journal:  Neurochem Res        ISSN: 0364-3190            Impact factor:   3.996


  57 in total

1.  Mild metabolic perturbations alter succinylation of mitochondrial proteins.

Authors:  Huanlian Chen; Hui Xu; Samuel Potash; Anatoly Starkov; Vsevolod V Belousov; Dmitry S Bilan; Travis T Denton; Gary E Gibson
Journal:  J Neurosci Res       Date:  2017-06-20       Impact factor: 4.164

2.  The first identification of lysine malonylation substrates and its regulatory enzyme.

Authors:  Chao Peng; Zhike Lu; Zhongyu Xie; Zhongyi Cheng; Yue Chen; Minjia Tan; Hao Luo; Yi Zhang; Wendy He; Ke Yang; Bernadette M M Zwaans; Daniel Tishkoff; Linh Ho; David Lombard; Tong-Chuan He; Junbiao Dai; Eric Verdin; Yang Ye; Yingming Zhao
Journal:  Mol Cell Proteomics       Date:  2011-09-09       Impact factor: 5.911

3.  Tyr phosphorylation of PDP1 toggles recruitment between ACAT1 and SIRT3 to regulate the pyruvate dehydrogenase complex.

Authors:  Jun Fan; Changliang Shan; Hee-Bum Kang; Shannon Elf; Jianxin Xie; Meghan Tucker; Ting-Lei Gu; Mike Aguiar; Scott Lonning; Huaibin Chen; Moosa Mohammadi; Laura-Mae P Britton; Benjamin A Garcia; Maša Alečković; Yibin Kang; Stefan Kaluz; Narra Devi; Erwin G Van Meir; Taro Hitosugi; Jae Ho Seo; Sagar Lonial; Manila Gaddh; Martha Arellano; Hanna J Khoury; Fadlo R Khuri; Titus J Boggon; Sumin Kang; Jing Chen
Journal:  Mol Cell       Date:  2014-01-30       Impact factor: 17.970

4.  Systematic identification of the lysine succinylation in the protozoan parasite Toxoplasma gondii.

Authors:  Xiaolong Li; Xin Hu; Yujing Wan; Guizhen Xie; Xiangzhi Li; Di Chen; Zhongyi Cheng; Xingling Yi; Shaohui Liang; Feng Tan
Journal:  J Proteome Res       Date:  2014-11-17       Impact factor: 4.466

5.  Distinct regulation of mitochondrial localization and stability of two human Sirt5 isoforms.

Authors:  Nobuko Matsushita; Ryo Yonashiro; Yoshinobu Ogata; Ayumu Sugiura; Shun Nagashima; Toshifumi Fukuda; Ryoko Inatome; Shigeru Yanagi
Journal:  Genes Cells       Date:  2010-12-09       Impact factor: 1.891

6.  SIRT5 desuccinylates and activates SOD1 to eliminate ROS.

Authors:  Zhi-Feng Lin; Hong-Bing Xu; Jian-Yun Wang; Qiang Lin; Zhen Ruan; Fa-Bing Liu; Wang Jin; Hai-Hua Huang; Xi Chen
Journal:  Biochem Biophys Res Commun       Date:  2013-10-16       Impact factor: 3.575

7.  Lysine glutarylation is a protein posttranslational modification regulated by SIRT5.

Authors:  Minjia Tan; Chao Peng; Kristin A Anderson; Peter Chhoy; Zhongyu Xie; Lunzhi Dai; Jeongsoon Park; Yue Chen; He Huang; Yi Zhang; Jennifer Ro; Gregory R Wagner; Michelle F Green; Andreas S Madsen; Jessica Schmiesing; Brett S Peterson; Guofeng Xu; Olga R Ilkayeva; Michael J Muehlbauer; Thomas Braulke; Chris Mühlhausen; Donald S Backos; Christian A Olsen; Peter J McGuire; Scott D Pletcher; David B Lombard; Matthew D Hirschey; Yingming Zhao
Journal:  Cell Metab       Date:  2014-04-01       Impact factor: 27.287

8.  Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.

Authors:  Matthew J Rardin; John C Newman; Jason M Held; Michael P Cusack; Dylan J Sorensen; Biao Li; Birgit Schilling; Sean D Mooney; C Ronald Kahn; Eric Verdin; Bradford W Gibson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-01       Impact factor: 11.205

9.  Glutamine via α-ketoglutarate dehydrogenase provides succinyl-CoA for heme synthesis during erythropoiesis.

Authors:  Joseph S Burch; Jason R Marcero; John Alan Maschek; James E Cox; Laurie K Jackson; Amy E Medlock; John D Phillips; Harry A Dailey
Journal:  Blood       Date:  2018-07-10       Impact factor: 22.113

10.  Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.

Authors:  Jintang Du; Yeyun Zhou; Xiaoyang Su; Jiu Jiu Yu; Saba Khan; Hong Jiang; Jungwoo Kim; Jimin Woo; Jun Huyn Kim; Brian Hyun Choi; Bin He; Wei Chen; Sheng Zhang; Richard A Cerione; Johan Auwerx; Quan Hao; Hening Lin
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

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  31 in total

1.  SIRT5 impairs aggregation and activation of the signaling adaptor MAVS through catalyzing lysine desuccinylation.

Authors:  Xing Liu; Chunchun Zhu; Huangyuan Zha; Jinhua Tang; Fangjing Rong; Xiaoyun Chen; Sijia Fan; Chenxi Xu; Juan Du; Junji Zhu; Jing Wang; Gang Ouyang; Guangqing Yu; Xiaolian Cai; Zhu Chen; Wuhan Xiao
Journal:  EMBO J       Date:  2020-04-17       Impact factor: 11.598

2.  Dietary succinate supplementation to maternal mice improves fetal brown adipose tissue development and thermogenesis of female offspring.

Authors:  Xiangdong Liu; Yanting Chen; Liang Zhao; Qiyu Tian; Jeanene Marie deAvila; Mei-Jun Zhu; Min Du
Journal:  J Nutr Biochem       Date:  2021-11-18       Impact factor: 6.048

3.  Aspirin modulates succinylation of PGAM1K99 to restrict the glycolysis through NF-κB/HAT1/PGAM1 signaling in liver cancer.

Authors:  Yu-Fei Wang; Li-Na Zhao; Yu Geng; Hong-Feng Yuan; Chun-Yu Hou; Hui-Hui Zhang; Guang Yang; Xiao-Dong Zhang
Journal:  Acta Pharmacol Sin       Date:  2022-07-14       Impact factor: 7.169

4.  Engineering of succinyl-CoA metabolism in view of succinylation regulation to improve the erythromycin production.

Authors:  Xiang Ke; Xing Jiang; Mingzhi Huang; Xiwei Tian; Ju Chu
Journal:  Appl Microbiol Biotechnol       Date:  2022-07-12       Impact factor: 5.560

5.  PTMs: A Missing Piece for Schizophrenia Studies.

Authors:  Caroline Brandão-Teles; Bradley J Smith; Victor Corasolla Carregari
Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 3.650

Review 6.  Toward an Understanding of the Structural and Mechanistic Aspects of Protein-Protein Interactions in 2-Oxoacid Dehydrogenase Complexes.

Authors:  Natalia S Nemeria; Xu Zhang; Joao Leandro; Jieyu Zhou; Luying Yang; Sander M Houten; Frank Jordan
Journal:  Life (Basel)       Date:  2021-04-29

Review 7.  The Mystery of Extramitochondrial Proteins Lysine Succinylation.

Authors:  Christos Chinopoulos
Journal:  Int J Mol Sci       Date:  2021-06-04       Impact factor: 5.923

Review 8.  From Metabolism to Genetics and Vice Versa: The Rising Role of Oncometabolites in Cancer Development and Therapy.

Authors:  Emanuela Di Gregorio; Gianmaria Miolo; Asia Saorin; Agostino Steffan; Giuseppe Corona
Journal:  Int J Mol Sci       Date:  2021-05-25       Impact factor: 5.923

9.  LSTMCNNsucc: A Bidirectional LSTM and CNN-Based Deep Learning Method for Predicting Lysine Succinylation Sites.

Authors:  Guohua Huang; Qingfeng Shen; Guiyang Zhang; Pan Wang; Zu-Guo Yu
Journal:  Biomed Res Int       Date:  2021-05-28       Impact factor: 3.411

10.  Structure, Biosynthesis, and Biological Activity of Succinylated Forms of Bacteriocin BacSp222.

Authors:  Justyna Śmiałek; Michał Nowakowski; Monika Bzowska; Oliwia Bocheńska; Agnieszka Wlizło; Andrzej Kozik; Grzegorz Dubin; Paweł Mak
Journal:  Int J Mol Sci       Date:  2021-06-10       Impact factor: 5.923

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