| Literature DB >> 24886133 |
Travis J O'Brien1, Arthur F Harralson, Tuyen Tran, Ian Gindoff, Funda E Orkunoglu-Suer, David Frankfurter, Paul Gindoff.
Abstract
BACKGROUND: The objective of this investigation was to determine if kinase insert domain/vascular endothelial growth factor receptor 2 (KDR/VEGFR2) genetic variation was associated with the development of ovarian hyperstimulation syndrome (OHSS) in patients undergoing controlled ovarian hyperstimulation (COH).Entities:
Mesh:
Substances:
Year: 2014 PMID: 24886133 PMCID: PMC4024119 DOI: 10.1186/1477-7827-12-36
Source DB: PubMed Journal: Reprod Biol Endocrinol ISSN: 1477-7827 Impact factor: 5.211
Primer sequences for DNA sequencing
| rs2219471 | TCCACAGGGATTGCTCCAAC | ATATTTGGCCCCGTGGAGTG |
| rs3025035 | CAGGGGTCCTTGGGAAAGAT | AGAACAGGCCCTACCCTTCT |
| rs2305945 | GTGGGTACTAAGCTATGTAATTCCC | CCACACAGAGCTTGTGGTTTA |
| rs2305948 | TTTCCAAGACCATAGCTTACCAT | CAGCATCAGCATAAGAAACTTGTA |
| rs1870377 | TGGTACTGCTAAAAGTCAATGG | GGCTGCGTTGGAAGTTATTT |
| rs1870378 | CACTACGGCCTCAAGAGAGAAG | CTGGGTTCCCAAATGTTATGCG |
SNP frequencies in controls and OHSS cases
| | | | |
| CC | 131 (0.75) | 116 (0.75) | 15 (0.79) |
| CT | 40 (0.23) | 36 (0.23) | 4 (0.21) |
| TT | 3 (0.02) | 3 (0.02) | 0 |
| | | | |
| CC | 96 (0.55) | 83 (0.54) | 13 (0.68) |
| CT | 65 (0.37) | 60 (0.39) | 5 (0.26) |
| TT | 13 (0.07) | 12 (0.08) | 1 (0.05) |
| | | | |
| GG | 70 (0.40) | 61 (0.39) | 9 (0.47) |
| GT | 79 (0.45) | 74 (0.48) | 5 (0.26) |
| TT | 25 (0.14) | 20 (0.13) | 5 (0.26) |
rs2305945 association with OHSS (n = 174, Adjusted for Age and Race)
| Codominant | G/G | 61 (39.4%) | 9 (47.4%) | 1 | 0.064 |
| | G/T | 74 (47.7%) | 5 (26.3%) | 0.35 (0.10, 1.19) | |
| | T/T | 20 (12.9%) | 5 (26.3%) | 1.70 (0.46, 6.34) | |
| Dominant | G/G | 61 (39.4%) | 9 (47.4%) | 1 | 0.320 |
| | G/T-T/T | 94 (60.6%) | 10 (52.6%) | 0.59 (0.21, 1.65) | |
| Recessive | G/G-G/T | 135 (87.1%) | 14 (73.7%) | 1 | 0.110 |
| | T/T | 20 (12.9%) | 5 (26.3%) | 2.79 (0.82, 9.47) | |
| Overdominant | G/G-T/T | 81 (52.3%) | 14 (73.7%) | 1 | 0.027 |
| G/T | 74 (47.7%) | 5 (26.3%) | 0.30 (0.10, 0.93) |
Haplotype estimation (n = 174)
| C | C | G | 0.352 | 0.334 | 0.474 |
| C | C | T | 0.327 | 0.329 | 0.342 |
| C | T | G | 0.164 | 0.185 | 0.026 |
| T | T | G | 0.073 | 0.069 | 0.105 |
| T | C | G | 0.041 | 0.044 | -- |
| C | T | T | 0.025 | 0.017 | 0.053 |
| T | C | T | 0.019 | 0.022 | -- |
| T | T | T | -- | -- | -- |
Haplotype frequencies estimation and association with OHSS (n = 174)
| 1 | C | C | G | 1 | --- |
| 2 | C | C | T | 0.72 (0.32, 1.59) | 0.42 |
| 3 | C | T | G | 0.10 (0.01, 0.80) | 0.031 |
| 4 | T | T | G | 1.15 (0.34, 3.87) | 0.82 |
| 5 | T | C | G | -- | -- |
| 6 | C | T | T | 2.72 (0.35, 21.30) | 0.34 |
| 7 | T | C | T | -- | -- |
Global haplotype association p-value: 0.033.
Haplotype (CTG) association with OHSS risk
| | | | |
| | | | |
| | 0.10 | 0.01, 0.80 | 0.031 |
| | | | |
| Age | 0.08 | 0.01, 0.66 | 0.020 |
| Race | 0.08 | 0.01, 0.69 | 0.023 |
| Age, Race | 0.04 | 0.00, 0.46 | 0.011 |