Literature DB >> 24878339

Architecture of viral genome-delivery molecular machines.

Anshul Bhardwaj1, Adam S Olia2, Gino Cingolani3.   

Abstract

From the abyss of the ocean to the human gut, bacterial viruses (or bacteriophages) have colonized all ecosystems of the planet earth and evolved in sync with their bacterial hosts. Over 95% of bacteriophages have a tail that varies greatly in length and complexity. The tail complex interrupts the icosahedral capsid symmetry and provides both an entry for viral genome-packaging during replication and an exit for genome-ejection during infection. Here, we review recent progress in deciphering the structure, assembly and conformational dynamics of viral genome-delivery tail machines. We focus on the bacteriophages P22 and T7, two well-studied members of the Podoviridae family that use short, non-contractile tails to infect Gram-negative bacteria. The structure of specialized tail fibers and their putative role in host anchoring, cell-surface penetration and genome-ejection is discussed.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24878339      PMCID: PMC4040186          DOI: 10.1016/j.sbi.2013.10.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  48 in total

1.  Binding-induced stabilization and assembly of the phage P22 tail accessory factor gp4.

Authors:  Adam S Olia; Jawdat Al-Bassam; Danella A Winn-Stapley; Lisa Joss; Sherwood R Casjens; Gino Cingolani
Journal:  J Mol Biol       Date:  2006-08-12       Impact factor: 5.469

2.  Maturation of phage T7 involves structural modification of both shell and inner core components.

Authors:  Xabier Agirrezabala; Jaime Martín-Benito; José R Castón; Roberto Miranda; José María Valpuesta; José L Carrascosa
Journal:  EMBO J       Date:  2005-10-06       Impact factor: 11.598

3.  The structure of an infectious P22 virion shows the signal for headful DNA packaging.

Authors:  Gabriel C Lander; Liang Tang; Sherwood R Casjens; Eddie B Gilcrease; Peter Prevelige; Anton Poliakov; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Science       Date:  2006-05-18       Impact factor: 47.728

Review 4.  Peptidoglycan structure and architecture.

Authors:  Waldemar Vollmer; Didier Blanot; Miguel A de Pedro
Journal:  FEMS Microbiol Rev       Date:  2008-01-08       Impact factor: 16.408

5.  Determination of stoichiometry and conformational changes in the first step of the P22 tail assembly.

Authors:  Kristina Lorenzen; Adam S Olia; Charlotte Uetrecht; Gino Cingolani; Albert J R Heck
Journal:  J Mol Biol       Date:  2008-02-15       Impact factor: 5.469

6.  Domain organization and polarity of tail needle GP26 in the portal vertex structure of bacteriophage P22.

Authors:  Anshul Bhardwaj; Adam S Olia; Nancy Walker-Kopp; Gino Cingolani
Journal:  J Mol Biol       Date:  2007-05-24       Impact factor: 5.469

7.  Role of gene 10 protein in the hierarchical assembly of the bacteriophage P22 portal vertex structure.

Authors:  Adam S Olia; Anshul Bhardwaj; Lisa Joss; Sherwood Casjens; Gino Cingolani
Journal:  Biochemistry       Date:  2007-07-10       Impact factor: 3.162

8.  Structural plasticity of the phage P22 tail needle gp26 probed with xenon gas.

Authors:  Adam S Olia; Sherwood Casjens; Gino Cingolani
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

9.  Three-dimensional structure of the bacteriophage P22 tail machine.

Authors:  Liang Tang; William R Marion; Gino Cingolani; Peter E Prevelige; John E Johnson
Journal:  EMBO J       Date:  2005-06-02       Impact factor: 11.598

10.  A conformational switch in bacteriophage p22 portal protein primes genome injection.

Authors:  Hongjin Zheng; Adam S Olia; Melissa Gonen; Simeon Andrews; Gino Cingolani; Tamir Gonen
Journal:  Mol Cell       Date:  2008-02-15       Impact factor: 17.970

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  22 in total

1.  Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.

Authors:  Anshul Bhardwaj; Rajeshwer S Sankhala; Adam S Olia; Dewey Brooke; Sherwood R Casjens; Derek J Taylor; Peter E Prevelige; Gino Cingolani
Journal:  J Biol Chem       Date:  2015-11-16       Impact factor: 5.157

2.  DNA Conformational Changes Play a Force-Generating Role during Bacteriophage Genome Packaging.

Authors:  Kim A Sharp; Xiang-Jun Lu; Gino Cingolani; Stephen C Harvey
Journal:  Biophys J       Date:  2019-04-30       Impact factor: 4.033

3.  Phage Proteins Required for Tail Fiber Assembly Also Bind Specifically to the Surface of Host Bacterial Strains.

Authors:  Olesia I North; Alan R Davidson
Journal:  J Bacteriol       Date:  2021-01-11       Impact factor: 3.490

4.  Conformational changes leading to T7 DNA delivery upon interaction with the bacterial receptor.

Authors:  Verónica A González-García; Mar Pulido-Cid; Carmela Garcia-Doval; Rebeca Bocanegra; Mark J van Raaij; Jaime Martín-Benito; Ana Cuervo; José L Carrascosa
Journal:  J Biol Chem       Date:  2015-02-19       Impact factor: 5.157

5.  Cargo-shell and cargo-cargo couplings govern the mechanics of artificially loaded virus-derived cages.

Authors:  Aida Llauró; Daniel Luque; Ethan Edwards; Benes L Trus; John Avera; David Reguera; Trevor Douglas; Pedro J de Pablo; José R Castón
Journal:  Nanoscale       Date:  2016-04-28       Impact factor: 7.790

6.  Architecture of the Complex Formed by Large and Small Terminase Subunits from Bacteriophage P22.

Authors:  Reginald McNulty; Ravi Kumar Lokareddy; Ankoor Roy; Yang Yang; Gabriel C Lander; Albert J R Heck; John E Johnson; Gino Cingolani
Journal:  J Mol Biol       Date:  2015-08-21       Impact factor: 5.469

7.  Divergent Evolution of Nuclear Localization Signal Sequences in Herpesvirus Terminase Subunits.

Authors:  Rajeshwer S Sankhala; Ravi K Lokareddy; Gino Cingolani
Journal:  J Biol Chem       Date:  2016-03-31       Impact factor: 5.157

8.  Bacteriophage P22 ejects all of its internal proteins before its genome.

Authors:  Yan Jin; Sophia M Sdao; John A Dover; Natalia B Porcek; Charles M Knobler; William M Gelbart; Kristin N Parent
Journal:  Virology       Date:  2015-08-01       Impact factor: 3.616

9.  Characterization of the initial steps in the T7 DNA ejection process.

Authors:  Verónica A González-García; Rebeca Bocanegra; Mar Pulido-Cid; Jaime Martín-Benito; Ana Cuervo; José L Carrascosa
Journal:  Bacteriophage       Date:  2015-06-02

10.  Characterization, Genome Sequence, and Analysis of Escherichia Phage CICC 80001, a Bacteriophage Infecting an Efficient L-Aspartic Acid Producing Escherichia coli.

Authors:  Youqiang Xu; Yuyue Ma; Su Yao; Zengyan Jiang; Jiangsen Pei; Chi Cheng
Journal:  Food Environ Virol       Date:  2015-10-26       Impact factor: 2.778

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