Literature DB >> 16211007

Maturation of phage T7 involves structural modification of both shell and inner core components.

Xabier Agirrezabala1, Jaime Martín-Benito, José R Castón, Roberto Miranda, José María Valpuesta, José L Carrascosa.   

Abstract

The double-stranded DNA bacteriophages are good model systems to understand basic biological processes such as the macromolecular interactions that take place during the virus assembly and maturation, or the behavior of molecular motors that function during the DNA packaging process. Using cryoelectron microscopy and single-particle methodology, we have determined the structures of two phage T7 assemblies produced during its morphogenetic process, the DNA-free prohead and the mature virion. The first structure reveals a complex assembly in the interior of the capsid, which involves the scaffolding, and the core complex, which plays an important role in DNA packaging and is located in one of the phage vertices. The reconstruction of the mature virion reveals important changes in the shell, now much larger and thinner, the disappearance of the scaffolding structure, and important rearrangements of the core complex, which now protrudes the shell and interacts with the tail. Some of these changes must originate by the pressure exerted by the DNA in the interior of the head.

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Year:  2005        PMID: 16211007      PMCID: PMC1276722          DOI: 10.1038/sj.emboj.7600840

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  44 in total

1.  Structure of the bacteriophage phi29 DNA packaging motor.

Authors:  A A Simpson; Y Tao; P G Leiman; M O Badasso; Y He; P J Jardine; N H Olson; M C Morais; S Grimes; D L Anderson; T S Baker; M G Rossmann
Journal:  Nature       Date:  2000-12-07       Impact factor: 49.962

2.  Virus maturation involving large subunit rotations and local refolding.

Authors:  J F Conway; W R Wikoff; N Cheng; R L Duda; R W Hendrix; J E Johnson; A C Steven
Journal:  Science       Date:  2001-04-27       Impact factor: 47.728

3.  Shape and DNA packaging activity of bacteriophage SPP1 procapsid: protein components and interactions during assembly.

Authors:  A Dröge; M A Santos; A C Stiege; J C Alonso; R Lurz; T A Trautner; P Tavares
Journal:  J Mol Biol       Date:  2000-02-11       Impact factor: 5.469

4.  A symmetry mismatch at the site of RNA packaging in the polymerase complex of dsRNA bacteriophage phi6.

Authors:  F de Haas; A O Paatero; L Mindich; D H Bamford; S D Fuller
Journal:  J Mol Biol       Date:  1999-11-26       Impact factor: 5.469

Review 5.  Scaffolding proteins and their role in viral assembly.

Authors:  T Dokland
Journal:  Cell Mol Life Sci       Date:  1999-11-15       Impact factor: 9.261

6.  Topologically linked protein rings in the bacteriophage HK97 capsid.

Authors:  W R Wikoff; L Liljas; R L Duda; H Tsuruta; R W Hendrix; J E Johnson
Journal:  Science       Date:  2000-09-22       Impact factor: 47.728

7.  Atomic snapshots of an RNA packaging motor reveal conformational changes linking ATP hydrolysis to RNA translocation.

Authors:  Erika J Mancini; Denis E Kainov; Jonathan M Grimes; Roman Tuma; Dennis H Bamford; David I Stuart
Journal:  Cell       Date:  2004-09-17       Impact factor: 41.582

8.  Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.

Authors:  Andrei Fokine; Petr G Leiman; Mikhail M Shneider; Bijan Ahvazi; Karen M Boeshans; Alasdair C Steven; Lindsay W Black; Vadim V Mesyanzhinov; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-06       Impact factor: 11.205

9.  Topology of the components of the DNA packaging machinery in the phage phi29 prohead.

Authors:  B Ibarra; J R Castón; O Llorca; M Valle; J M Valpuesta; J L Carrascosa
Journal:  J Mol Biol       Date:  2000-05-19       Impact factor: 5.469

10.  The bacteriophage straight phi29 portal motor can package DNA against a large internal force.

Authors:  D E Smith; S J Tans; S B Smith; S Grimes; D L Anderson; C Bustamante
Journal:  Nature       Date:  2001-10-18       Impact factor: 49.962

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  67 in total

1.  Bubblegrams reveal the inner body of bacteriophage φKZ.

Authors:  Weimin Wu; Julie A Thomas; Naiqian Cheng; Lindsay W Black; Alasdair C Steven
Journal:  Science       Date:  2012-01-13       Impact factor: 47.728

2.  Label-free identification of single dielectric nanoparticles and viruses with ultraweak polarization forces.

Authors:  Laura Fumagalli; Daniel Esteban-Ferrer; Ana Cuervo; Jose L Carrascosa; Gabriel Gomila
Journal:  Nat Mater       Date:  2012-07-08       Impact factor: 43.841

3.  Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.

Authors:  Alina Ionel; Javier A Velázquez-Muriel; Daniel Luque; Ana Cuervo; José R Castón; José M Valpuesta; Jaime Martín-Benito; José L Carrascosa
Journal:  J Biol Chem       Date:  2010-10-20       Impact factor: 5.157

Review 4.  Minicells, Back in Fashion.

Authors:  Madeline M Farley; Bo Hu; William Margolin; Jun Liu
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

5.  Structural changes of bacteriophage phi29 upon DNA packaging and release.

Authors:  Ye Xiang; Marc C Morais; Anthony J Battisti; Shelley Grimes; Paul J Jardine; Dwight L Anderson; Michael G Rossmann
Journal:  EMBO J       Date:  2006-10-19       Impact factor: 11.598

6.  The conformation of double-stranded DNA inside bacteriophages depends on capsid size and shape.

Authors:  Anton S Petrov; Mustafa Burak Boz; Stephen C Harvey
Journal:  J Struct Biol       Date:  2007-08-29       Impact factor: 2.867

7.  DNA poised for release in bacteriophage phi29.

Authors:  Jinghua Tang; Norman Olson; Paul J Jardine; Shelley Grimes; Dwight L Anderson; Timothy S Baker
Journal:  Structure       Date:  2008-06       Impact factor: 5.006

8.  Mutational analysis of the Pseudomonas aeruginosa myovirus KZ morphogenetic protease gp175.

Authors:  Julie A Thomas; Lindsay W Black
Journal:  J Virol       Date:  2013-06-05       Impact factor: 5.103

9.  Structural investigations of a Podoviridae streptococcus phage C1, implications for the mechanism of viral entry.

Authors:  Anastasia A Aksyuk; Valorie D Bowman; Bärbel Kaufmann; Christopher Fields; Thomas Klose; Heather A Holdaway; Vincent A Fischetti; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-13       Impact factor: 11.205

10.  Visualization of bacteriophage T3 capsids with DNA incompletely packaged in vivo.

Authors:  Ping-An Fang; Elena T Wright; Susan T Weintraub; Kevin Hakala; Weimin Wu; Philip Serwer; Wen Jiang
Journal:  J Mol Biol       Date:  2008-10-14       Impact factor: 5.469

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