| Literature DB >> 24868140 |
Amal F Gharib1, Sherif A Dabour2, Rasha L Etewa1, Rania A Fouad1.
Abstract
PURPOSE: To analyze the association of the polymorphisms of xeroderma pigmentosum complementation group D (XPD) and 8-oxoguanine glycosylase-1 (OGG1) genes with the risk of age-related cataract (ARC) in an Egyptian population.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24868140 PMCID: PMC4029483
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Demographic data of age-related cataract patients (n=150) versus controls (n=50).
| Parameters | Controls | Cataract patients | P value |
|---|---|---|---|
| Age (years) | |||
| Range: | 60–78 | 50–78 | |
| Mean ± SD: | 67.83±5.54 | 60.33±6.22 | <0.001 |
| Sex | |||
| Male: | 22 (44) | 56 (37.3) | |
| Female: | 28 (56) | 94 (62.7) | 0.40 |
* Two tailed t test **Chi-square (χ2) test
Genotype distributions and allelic frequencies of XPD Asp312Asn (rs1799793) polymorphism in age-related cataract patients (n=150) and controls (n=50).
| XPD Asp 312Asn polymorphism | Cataract patients, n (%) | Controls, n (%) | Odds ratio (95% confidence interval) | P value* |
|---|---|---|---|---|
| Genotype | ||||
| Asp/Asp | 67 (44.7) | 28 (56.0) | 1 (reference) | –– |
| Asp/Asn | 48 (32.0) | 17 (34.0) | 0.91 (0.46–1.80) | 0.79 |
| Asn/Asn | 35 (23.3) | 5 (10.0) | 2.74 (1.01–7.43) | 0.04 |
| Alleles | ||||
| Asp | 182 (60.7) | 73 (73.0) | 1 (reference) | –– |
| Asn | 118 (39.3) | 27 (27.0) | 1.75 (1.06–2.89) | 0.03 |
* Chi-square (χ2) test
Genotype distributions and allelic frequencies of XPD Asp312Asn (rs1799793) polymorphism in controls (n=50) versus in different subtypes of age-related cataract patients (n=150).
| XPD Asp312Asn polymorphism | Controls, n (%) | Cataract patients, n (%) | ||
|---|---|---|---|---|
| cortical cataract, n=50 | nuclear cataract, n=50 | posterior subcapsular cataract, n=50 | ||
| Genotype | ||||
| Asp/Asp | 28 (56) | 17 (34) | 24 (48) | 26 (52) |
| Asp/Asn | 17 (34) | 15 (30)* | 18 (36)* | 15 (30)* |
| Asn/Asn | 5 (10) | 18 (36)a | 8 (16)* | 9 (18)* |
| Alleles | ||||
| Asp (G) | 73 (73) | 49 (49) | 66 (66) | 67 (67) |
| Asn (A) | 27 (27) | 51 (51)b | 34 (34)* | 33 (33)* |
*not significant ap=0.002; odds ratio=5.06; 95% confidence interval (1.70–15.05). b p<0.001; odds ratio=2.81; 95% confidence interval (1.56–5.08).
Genotype distributions and allelic frequencies of OGG1 Ser326Cys (rs1052133) polymorphism in age-related cataract patients (n=150) and controls (n=50).
| OGG1 Ser326Cys polymorphism | Cataract patients, n (%) | Controls, n (%) | Odds ratio(95% confidence interval) | P value* |
|---|---|---|---|---|
| Genotype | ||||
| Ser/Ser | 77 (51.3) | 32 (64.0) | 1 (reference) | –– |
| Ser/Cys | 51 (34.0) | 16 (32.0) | 1.09 (0.55–2.17) | 0.8 |
| Cys/Cys | 22 (14.7) | 2 (4.0) | 4.13 (0.93–18.21) | 0.04 |
| Alleles | ||||
| Ser | 205 (68.3) | 80 (80.0) | 1 (reference) | –– |
| Cys | 95 (31.7) | 20 (20.0) | 1.85 (1.07–3.20) | 0.03 |
* Chi-square test
Genotype distributions and allelic frequencies of OGG1 Ser326Cys (rs1052133) polymorphism in controls (n=50) and in cataract patients (n=150) with different cataract subtypes.
| OGG1 Ser326Cys polymorphism | Controls, n (%) | Cataract patients, n (%) | |||||
|---|---|---|---|---|---|---|---|
| cortical, n=50 | nuclear, n=50 | posterior subcapsular, n=50 | |||||
| Genotype | |||||||
| Ser/Ser | 32 (64) | 22 (44) | 27 (54) | 28 (56) | |||
| Ser/Cys | 16 (32) | 18 (36)* | 17 (34)* | 16 (32)* | |||
| Cys/Cys | 2 (4) | 10 (20)a | 6 (12)* | 6 (12)* | |||
| Alleles | |||||||
| Ser | 80 (80) | 62 (62) | 71 (71) | 72 (72) | |||
| Cys | 20 (20) | 38 (38)b | 29 (29)* | 28 (28)* | |||
*not significant a p=0.01; odds ratio, 6.00; 95% confidence interval, 1.24–28.99. b p=0.005; odds ratio, 2.45; 95% confidence interval, 1.30–4.63.