| Literature DB >> 24826170 |
M Ambrose Rajkumar1, S Stanly John Xavier2, S Anbarasu1, Prem Anand Devarajan1, M NizamMohideen3.
Abstract
In the cation of the title mol-ecular salt, C5H6N3O2 (+)·C2HO4 (-), the dihedral angle between the aromatic ring and the nitro group is 3.5 (3)°; in the anion, the dihedral angle between the CO2 and CO2H planes is 10.5 (2)°. In the crystal, the anions are linked into [100] chains by O-H⋯O hydrogen bonds. The cations cross-link the chains by way of N-H⋯O hydrogen bonds and the structure is consolidated by C-H⋯O inter-actions.Entities:
Year: 2014 PMID: 24826170 PMCID: PMC3998560 DOI: 10.1107/S160053681400525X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H6N3O2+·C2HO4− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2794 reflections | |
| θ = 2.4–31.1° | |
| µ = 0.15 mm−1 | |
| α = 90.245 (2)° | |
| β = 98.500 (2)° | Block, colourless |
| γ = 100.038 (2)° | 0.35 × 0.30 × 0.30 mm |
| Bruker Kappa APEXII CCD diffractometer | 1615 independent reflections |
| Radiation source: fine-focus sealed tube | 1417 reflections with |
| Graphite monochromator | |
| Detector resolution: 0.1000 pixels mm-1 | θmax = 25.0°, θmin = 2.2° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 10142 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1615 reflections | (Δ/σ)max < 0.001 |
| 153 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.3486 (3) | 0.30577 (19) | 0.87248 (18) | 0.0302 (4) | |
| C2 | 0.5136 (3) | 0.2468 (2) | 0.97783 (19) | 0.0361 (4) | |
| H2 | 0.5206 | 0.2695 | 1.0768 | 0.043* | |
| C3 | 0.6606 (3) | 0.1580 (2) | 0.9356 (2) | 0.0380 (4) | |
| H3 | 0.7711 | 0.1201 | 1.0046 | 0.046* | |
| C4 | 0.6446 (3) | 0.12349 (19) | 0.78639 (19) | 0.0338 (4) | |
| C5 | 0.4879 (3) | 0.18053 (19) | 0.68547 (19) | 0.0332 (4) | |
| H5 | 0.4796 | 0.1582 | 0.5863 | 0.040* | |
| C6 | 0.8206 (3) | 0.61691 (18) | 0.66445 (17) | 0.0270 (4) | |
| C7 | 1.0607 (3) | 0.64305 (19) | 0.59536 (17) | 0.0269 (4) | |
| N1 | 0.3441 (3) | 0.26987 (16) | 0.72996 (15) | 0.0323 (4) | |
| H1 | 0.2451 | 0.3057 | 0.6649 | 0.039* | |
| N2 | 0.2009 (3) | 0.39211 (19) | 0.90933 (19) | 0.0408 (4) | |
| N3 | 0.7996 (3) | 0.02858 (19) | 0.73614 (19) | 0.0450 (4) | |
| O1 | 0.7803 (3) | −0.0001 (2) | 0.60645 (19) | 0.0674 (5) | |
| O2 | 0.9490 (4) | −0.0148 (3) | 0.8270 (2) | 0.0882 (7) | |
| O3 | 0.8197 (2) | 0.56345 (16) | 0.78510 (13) | 0.0410 (4) | |
| O4 | 0.6388 (2) | 0.65291 (16) | 0.58166 (14) | 0.0409 (4) | |
| H4 | 0.5159 | 0.6372 | 0.6226 | 0.061* | |
| O5 | 1.2521 (2) | 0.62615 (16) | 0.68401 (13) | 0.0395 (4) | |
| O6 | 1.0537 (2) | 0.67353 (14) | 0.46624 (12) | 0.0342 (3) | |
| H2A | 0.114 (5) | 0.439 (3) | 0.842 (3) | 0.060 (7)* | |
| H2B | 0.208 (4) | 0.407 (2) | 1.005 (3) | 0.051 (6)* |
| C1 | 0.0316 (9) | 0.0336 (9) | 0.0242 (8) | 0.0042 (7) | 0.0024 (7) | 0.0058 (7) |
| C2 | 0.0424 (10) | 0.0428 (10) | 0.0217 (8) | 0.0085 (8) | −0.0013 (7) | 0.0051 (7) |
| C3 | 0.0379 (10) | 0.0426 (10) | 0.0313 (9) | 0.0111 (8) | −0.0070 (7) | 0.0093 (8) |
| C4 | 0.0324 (9) | 0.0333 (9) | 0.0351 (10) | 0.0082 (7) | 0.0002 (7) | 0.0039 (7) |
| C5 | 0.0387 (10) | 0.0347 (9) | 0.0253 (9) | 0.0074 (7) | 0.0010 (7) | 0.0015 (7) |
| C6 | 0.0212 (8) | 0.0392 (9) | 0.0216 (8) | 0.0085 (7) | 0.0027 (6) | 0.0034 (6) |
| C7 | 0.0205 (8) | 0.0390 (9) | 0.0221 (8) | 0.0082 (6) | 0.0022 (6) | 0.0029 (6) |
| N1 | 0.0344 (8) | 0.0391 (8) | 0.0231 (7) | 0.0118 (6) | −0.0027 (6) | 0.0064 (6) |
| N2 | 0.0464 (10) | 0.0537 (10) | 0.0275 (9) | 0.0224 (8) | 0.0064 (7) | 0.0078 (7) |
| N3 | 0.0458 (10) | 0.0423 (9) | 0.0481 (11) | 0.0169 (8) | −0.0003 (8) | 0.0007 (7) |
| O1 | 0.0832 (12) | 0.0683 (11) | 0.0567 (10) | 0.0355 (9) | 0.0044 (9) | −0.0148 (8) |
| O2 | 0.0942 (14) | 0.1202 (17) | 0.0668 (12) | 0.0807 (14) | −0.0069 (10) | 0.0069 (11) |
| O3 | 0.0313 (7) | 0.0720 (9) | 0.0249 (7) | 0.0190 (6) | 0.0090 (5) | 0.0143 (6) |
| O4 | 0.0193 (6) | 0.0712 (9) | 0.0359 (7) | 0.0150 (6) | 0.0074 (5) | 0.0221 (6) |
| O5 | 0.0192 (6) | 0.0751 (10) | 0.0257 (6) | 0.0139 (6) | 0.0014 (5) | 0.0102 (6) |
| O6 | 0.0257 (6) | 0.0560 (8) | 0.0234 (6) | 0.0122 (5) | 0.0054 (5) | 0.0099 (5) |
| C1—N2 | 1.315 (2) | C6—O3 | 1.220 (2) |
| C1—N1 | 1.351 (2) | C6—O4 | 1.268 (2) |
| C1—C2 | 1.413 (2) | C6—C7 | 1.545 (2) |
| C2—C3 | 1.347 (3) | C7—O6 | 1.222 (2) |
| C2—H2 | 0.9300 | C7—O5 | 1.2759 (19) |
| C3—C4 | 1.398 (3) | N1—H1 | 0.8600 |
| C3—H3 | 0.9300 | N2—H2A | 0.89 (3) |
| C4—C5 | 1.352 (2) | N2—H2B | 0.89 (3) |
| C4—N3 | 1.448 (2) | N3—O1 | 1.210 (2) |
| C5—N1 | 1.344 (2) | N3—O2 | 1.211 (2) |
| C5—H5 | 0.9300 | O4—H4 | 0.8200 |
| N2—C1—N1 | 119.96 (16) | O3—C6—C7 | 120.04 (14) |
| N2—C1—C2 | 122.16 (16) | O4—C6—C7 | 112.84 (13) |
| N1—C1—C2 | 117.88 (16) | O6—C7—O5 | 126.27 (14) |
| C3—C2—C1 | 120.31 (16) | O6—C7—C6 | 120.06 (14) |
| C3—C2—H2 | 119.8 | O5—C7—C6 | 113.64 (13) |
| C1—C2—H2 | 119.8 | C5—N1—C1 | 122.79 (14) |
| C2—C3—C4 | 118.97 (16) | C5—N1—H1 | 118.6 |
| C2—C3—H3 | 120.5 | C1—N1—H1 | 118.6 |
| C4—C3—H3 | 120.5 | C1—N2—H2A | 121.5 (16) |
| C5—C4—C3 | 120.75 (17) | C1—N2—H2B | 115.1 (15) |
| C5—C4—N3 | 118.45 (16) | H2A—N2—H2B | 123 (2) |
| C3—C4—N3 | 120.79 (16) | O1—N3—O2 | 123.01 (19) |
| N1—C5—C4 | 119.29 (16) | O1—N3—C4 | 119.28 (16) |
| N1—C5—H5 | 120.4 | O2—N3—C4 | 117.68 (17) |
| C4—C5—H5 | 120.4 | C6—O4—H4 | 109.5 |
| O3—C6—O4 | 127.10 (15) | ||
| N2—C1—C2—C3 | 179.55 (17) | O3—C6—C7—O5 | −10.4 (2) |
| N1—C1—C2—C3 | 0.1 (3) | O4—C6—C7—O5 | 171.21 (16) |
| C1—C2—C3—C4 | −0.9 (3) | C4—C5—N1—C1 | −0.1 (3) |
| C2—C3—C4—C5 | 1.3 (3) | N2—C1—N1—C5 | −179.04 (16) |
| C2—C3—C4—N3 | 179.89 (17) | C2—C1—N1—C5 | 0.4 (3) |
| C3—C4—C5—N1 | −0.8 (3) | C5—C4—N3—O1 | −1.9 (3) |
| N3—C4—C5—N1 | −179.43 (16) | C3—C4—N3—O1 | 179.50 (18) |
| O3—C6—C7—O6 | 168.06 (17) | C5—C4—N3—O2 | 175.9 (2) |
| O4—C6—C7—O6 | −10.3 (2) | C3—C4—N3—O2 | −2.7 (3) |
| H··· | ||||
| C2—H2···O5i | 0.93 | 2.48 | 3.323 (2) | 152 |
| C3—H3···O2ii | 0.93 | 2.37 | 3.296 (2) | 178 |
| C5—H5···O1iii | 0.93 | 2.42 | 3.186 (2) | 140 |
| C5—H5···O4iv | 0.93 | 2.44 | 2.970 (2) | 116 |
| N1—H1···O4iv | 0.86 | 2.47 | 2.9770 (18) | 119 |
| N1—H1···O6iv | 0.86 | 1.94 | 2.7697 (18) | 160 |
| O4—H4···O5v | 0.82 | 1.64 | 2.4486 (16) | 170 |
| N2—H2 | 0.89 (3) | 2.16 (3) | 2.959 (2) | 149 (2) |
| N2—H2 | 0.89 (3) | 2.36 (3) | 3.007 (2) | 130 (2) |
| N2—H2 | 0.89 (3) | 1.99 (3) | 2.870 (2) | 173 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C2—H2⋯O5i | 0.93 | 2.48 | 3.323 (2) | 152 |
| C3—H3⋯O2ii | 0.93 | 2.37 | 3.296 (2) | 178 |
| C5—H5⋯O1iii | 0.93 | 2.42 | 3.186 (2) | 140 |
| C5—H5⋯O4iv | 0.93 | 2.44 | 2.970 (2) | 116 |
| N1—H1⋯O6iv | 0.86 | 1.94 | 2.7697 (18) | 160 |
| O4—H4⋯O5v | 0.82 | 1.64 | 2.4486 (16) | 170 |
| N2—H2 | 0.89 (3) | 2.16 (3) | 2.959 (2) | 149 (2) |
| N2—H2 | 0.89 (3) | 2.36 (3) | 3.007 (2) | 130 (2) |
| N2—H2 | 0.89 (3) | 1.99 (3) | 2.870 (2) | 173 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .