| Literature DB >> 24109379 |
M Sethuram1, G Bhargavi, M Dhandapani, G Amirthaganesan, M Nizammohideen.
Abstract
The title compound, C14H20N4O4·0.5H2O [systematic name: (2S)-5-{[amino-(iminium-yl)meth-yl]amino}-2-{[(1Z)-4-meth-oxy-2-oxido-benzyl-idene]aza-nium-yl}penta-noate hemihydrate], has been synthesized by the reaction of l-arginine and 4-meth-oxy-salicyl-aldehyde and crystallizes with two independent substituted l-arginine mol-ecules and one water mol-ecule of solvation in the asymmetric unit. Each mol-ecule exists as a zwitterion and adopts a Z configuration about the central C=N. The mol-ecular conformation is stabilized by strong intra-molecular N-H⋯O hydrogen bonds that generate S(6) and S(10) ring motifs. Inter-molecular N-H⋯O and O-H⋯O hydrogen bonds involving also the water mol-ecule and weak inter-molecular C-H⋯Owater inter-actions link the mol-ecules into an infinite one-dimensional ribbon structure extending along the b axis. The known (2S) absolute configuration for l-arginine was invoked. Weak intermolecular C-H⋯π interactions are also present.Entities:
Year: 2013 PMID: 24109379 PMCID: PMC3793792 DOI: 10.1107/S1600536813019727
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H20N4O4·0.5H2O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 3158 reflections |
| θ = 2.5–31.2° | |
| µ = 0.10 mm−1 | |
| β = 102.688 (2)° | Block, yellow |
| 0.30 × 0.30 × 0.25 mm | |
| Bruker Kappa APEXII CCD-detector diffractometer | 7483 independent reflections |
| Radiation source: fine-focus sealed tube | 5859 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 28.4°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 18648 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 7483 reflections | Δρmax = 0.25 e Å−3 |
| 452 parameters | Δρmin = −0.21 e Å−3 |
| 14 restraints | Absolute structure: Flack (1983), 3448 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.1 (14) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.1564 (4) | 1.2584 (4) | 0.5422 (3) | 0.0774 (13) | |
| H1A | 0.1669 | 1.3231 | 0.5874 | 0.116* | |
| H1B | 0.0660 | 1.2607 | 0.5074 | 0.116* | |
| H1C | 0.2185 | 1.2750 | 0.5051 | 0.116* | |
| C2 | 0.1744 (3) | 1.0292 (4) | 0.5285 (2) | 0.0536 (8) | |
| C3 | 0.2238 (4) | 0.9149 (4) | 0.5704 (2) | 0.0566 (9) | |
| H3 | 0.2572 | 0.9129 | 0.6310 | 0.068* | |
| C4 | 0.2224 (3) | 0.8064 (4) | 0.5214 (2) | 0.0515 (8) | |
| H4 | 0.2571 | 0.7303 | 0.5492 | 0.062* | |
| C5 | 0.1703 (3) | 0.8047 (3) | 0.4296 (2) | 0.0444 (7) | |
| C6 | 0.1152 (4) | 0.9209 (3) | 0.3871 (2) | 0.0487 (8) | |
| C7 | 0.1196 (4) | 1.0328 (4) | 0.4389 (2) | 0.0559 (9) | |
| H7 | 0.0853 | 1.1101 | 0.4127 | 0.067* | |
| C8 | 0.1721 (3) | 0.6905 (3) | 0.3831 (2) | 0.0471 (7) | |
| H8 | 0.2109 | 0.6185 | 0.4146 | 0.057* | |
| C9 | 0.1152 (3) | 0.5543 (3) | 0.2513 (2) | 0.0462 (7) | |
| H9 | 0.2055 | 0.5167 | 0.2598 | 0.055* | |
| C10 | 0.0613 (4) | 0.5805 (3) | 0.1526 (2) | 0.0499 (8) | |
| C11 | 0.0248 (4) | 0.4611 (3) | 0.2890 (2) | 0.0521 (8) | |
| H11A | 0.0645 | 0.4484 | 0.3510 | 0.063* | |
| H11B | −0.0618 | 0.5025 | 0.2849 | 0.063* | |
| C12 | 0.0006 (4) | 0.3291 (3) | 0.2457 (2) | 0.0496 (8) | |
| H12A | −0.0534 | 0.2779 | 0.2773 | 0.059* | |
| H12B | −0.0510 | 0.3401 | 0.1859 | 0.059* | |
| C13 | 0.1279 (4) | 0.2552 (3) | 0.2433 (2) | 0.0524 (8) | |
| H13A | 0.1827 | 0.3057 | 0.2120 | 0.063* | |
| H13B | 0.1792 | 0.2420 | 0.3030 | 0.063* | |
| C14 | 0.0664 (3) | 0.1157 (3) | 0.1148 (2) | 0.0474 (7) | |
| C15 | 0.6713 (5) | −0.0130 (4) | 0.0132 (3) | 0.0757 (12) | |
| H15A | 0.6971 | −0.0757 | −0.0255 | 0.114* | |
| H15B | 0.5757 | −0.0169 | 0.0082 | 0.114* | |
| H15C | 0.7165 | −0.0313 | 0.0728 | 0.114* | |
| C16 | 0.6801 (4) | 0.2145 (4) | 0.0364 (2) | 0.0574 (9) | |
| C17 | 0.7369 (4) | 0.3301 (4) | 0.0165 (2) | 0.0575 (9) | |
| H17 | 0.7866 | 0.3324 | −0.0270 | 0.069* | |
| C18 | 0.7196 (4) | 0.4378 (4) | 0.0602 (2) | 0.0551 (8) | |
| H18 | 0.7587 | 0.5146 | 0.0472 | 0.066* | |
| C19 | 0.6423 (3) | 0.4371 (3) | 0.1264 (2) | 0.0494 (8) | |
| C20 | 0.5796 (4) | 0.3217 (3) | 0.1448 (2) | 0.0573 (9) | |
| C21 | 0.6024 (4) | 0.2094 (4) | 0.0976 (2) | 0.0631 (10) | |
| H21 | 0.5639 | 0.1313 | 0.1086 | 0.076* | |
| C22 | 0.6243 (3) | 0.5520 (3) | 0.1693 (2) | 0.0480 (7) | |
| H22 | 0.6677 | 0.6254 | 0.1550 | 0.058* | |
| C23 | 0.5306 (4) | 0.6853 (3) | 0.2695 (2) | 0.0463 (7) | |
| H23 | 0.6141 | 0.7357 | 0.2800 | 0.056* | |
| C24 | 0.4951 (3) | 0.6572 (3) | 0.3579 (2) | 0.0470 (8) | |
| C25 | 0.4207 (4) | 0.7613 (3) | 0.2061 (2) | 0.0532 (8) | |
| H25A | 0.4490 | 0.7738 | 0.1510 | 0.064* | |
| H25B | 0.3392 | 0.7097 | 0.1935 | 0.064* | |
| C26 | 0.3882 (4) | 0.8927 (3) | 0.2403 (2) | 0.0550 (9) | |
| H26A | 0.3201 | 0.9348 | 0.1956 | 0.066* | |
| H26B | 0.3509 | 0.8803 | 0.2920 | 0.066* | |
| C27 | 0.5096 (4) | 0.9796 (3) | 0.2639 (2) | 0.0582 (9) | |
| H27A | 0.5780 | 0.9366 | 0.3078 | 0.070* | |
| H27B | 0.5460 | 0.9925 | 0.2119 | 0.070* | |
| C28 | 0.4773 (3) | 1.1249 (3) | 0.3797 (2) | 0.0456 (7) | |
| N1 | 0.1241 (3) | 0.6759 (3) | 0.29926 (18) | 0.0476 (6) | |
| N2 | 0.0979 (3) | 0.1312 (3) | 0.20033 (17) | 0.0545 (7) | |
| H2 | 0.1009 | 0.0637 | 0.2330 | 0.065* | |
| N3 | 0.0323 (4) | −0.0009 (3) | 0.0810 (2) | 0.0585 (8) | |
| N4 | 0.0709 (3) | 0.2127 (3) | 0.06010 (18) | 0.0525 (7) | |
| N5 | 0.5525 (3) | 0.5643 (3) | 0.22704 (17) | 0.0482 (6) | |
| N6 | 0.4817 (4) | 1.1051 (3) | 0.29785 (19) | 0.0597 (8) | |
| H6 | 0.4674 | 1.1695 | 0.2620 | 0.072* | |
| N7 | 0.4545 (3) | 1.2428 (3) | 0.40673 (19) | 0.0524 (7) | |
| N8 | 0.4954 (4) | 1.0294 (3) | 0.43757 (19) | 0.0575 (8) | |
| O1 | 0.1831 (3) | 1.1333 (3) | 0.58193 (18) | 0.0720 (8) | |
| O2 | 0.0628 (3) | 0.9232 (2) | 0.30397 (14) | 0.0621 (7) | |
| O3 | 0.0088 (3) | 0.6877 (3) | 0.13073 (16) | 0.0692 (8) | |
| O4 | 0.0710 (3) | 0.4893 (2) | 0.10247 (15) | 0.0584 (6) | |
| O5 | 0.7073 (3) | 0.1124 (3) | −0.01041 (17) | 0.0733 (8) | |
| O6 | 0.5054 (3) | 0.3186 (3) | 0.20185 (19) | 0.0779 (9) | |
| O7 | 0.5093 (3) | 0.7516 (3) | 0.40963 (15) | 0.0587 (6) | |
| O8 | 0.4554 (3) | 0.5477 (2) | 0.37124 (16) | 0.0586 (6) | |
| O1W | 0.8113 (4) | 0.8224 (5) | 0.2043 (3) | 0.1180 (13) | |
| H1W | 0.834 (6) | 0.892 (5) | 0.244 (4) | 0.177* | |
| H2W | 0.889 (4) | 0.783 (6) | 0.194 (5) | 0.177* | |
| H4A | 0.081 (3) | 0.2932 (15) | 0.082 (2) | 0.044 (9)* | |
| H7A | 0.459 (4) | 1.306 (3) | 0.3681 (19) | 0.058 (11)* | |
| H4B | 0.056 (4) | 0.205 (4) | 0.0015 (7) | 0.060 (11)* | |
| H7B | 0.461 (3) | 1.251 (3) | 0.4649 (8) | 0.047 (9)* | |
| H8A | 0.492 (4) | 0.9466 (15) | 0.420 (2) | 0.055 (10)* | |
| H8B | 0.492 (4) | 1.045 (4) | 0.4935 (10) | 0.056 (10)* | |
| H3A | 0.021 (4) | −0.064 (3) | 0.118 (2) | 0.065 (12)* | |
| H3B | 0.003 (3) | −0.009 (4) | 0.0228 (8) | 0.054 (10)* | |
| H5 | 0.513 (3) | 0.493 (2) | 0.241 (2) | 0.053 (10)* | |
| H1 | 0.083 (3) | 0.744 (2) | 0.271 (2) | 0.049 (9)* |
| C1 | 0.063 (2) | 0.064 (3) | 0.102 (3) | 0.002 (2) | 0.011 (2) | −0.035 (3) |
| C2 | 0.0496 (19) | 0.061 (2) | 0.0531 (19) | −0.0094 (17) | 0.0164 (15) | −0.0168 (17) |
| C3 | 0.055 (2) | 0.069 (2) | 0.0425 (17) | −0.0028 (18) | 0.0048 (15) | −0.0087 (18) |
| C4 | 0.0464 (18) | 0.055 (2) | 0.0472 (18) | −0.0038 (15) | −0.0021 (14) | −0.0025 (16) |
| C5 | 0.0464 (17) | 0.0452 (17) | 0.0428 (16) | −0.0023 (14) | 0.0126 (14) | −0.0029 (14) |
| C6 | 0.0536 (19) | 0.0472 (19) | 0.0475 (18) | −0.0096 (15) | 0.0158 (15) | −0.0057 (15) |
| C7 | 0.065 (2) | 0.0477 (19) | 0.056 (2) | −0.0052 (17) | 0.0158 (17) | −0.0047 (16) |
| C8 | 0.0481 (18) | 0.0470 (17) | 0.0459 (17) | −0.0023 (15) | 0.0097 (14) | 0.0040 (15) |
| C9 | 0.0590 (19) | 0.0395 (17) | 0.0390 (16) | −0.0023 (15) | 0.0085 (14) | −0.0018 (13) |
| C10 | 0.062 (2) | 0.048 (2) | 0.0410 (17) | −0.0091 (16) | 0.0149 (15) | −0.0017 (15) |
| C11 | 0.075 (2) | 0.0420 (18) | 0.0416 (17) | −0.0030 (16) | 0.0188 (16) | 0.0003 (14) |
| C12 | 0.067 (2) | 0.0421 (17) | 0.0416 (16) | −0.0115 (16) | 0.0158 (15) | −0.0018 (14) |
| C13 | 0.072 (2) | 0.0427 (17) | 0.0383 (16) | −0.0027 (17) | 0.0039 (15) | −0.0006 (14) |
| C14 | 0.0542 (19) | 0.0400 (17) | 0.0479 (18) | 0.0086 (15) | 0.0110 (15) | −0.0007 (15) |
| C15 | 0.092 (3) | 0.056 (2) | 0.077 (3) | 0.007 (2) | 0.016 (2) | −0.017 (2) |
| C16 | 0.074 (2) | 0.057 (2) | 0.0395 (17) | 0.0196 (18) | 0.0091 (16) | 0.0011 (15) |
| C17 | 0.062 (2) | 0.070 (2) | 0.0436 (18) | 0.0046 (19) | 0.0186 (16) | −0.0002 (17) |
| C18 | 0.058 (2) | 0.058 (2) | 0.0509 (19) | −0.0003 (17) | 0.0150 (16) | 0.0013 (17) |
| C19 | 0.0538 (19) | 0.0484 (19) | 0.0457 (17) | 0.0080 (15) | 0.0103 (14) | 0.0053 (15) |
| C20 | 0.085 (3) | 0.0418 (18) | 0.0497 (19) | 0.0124 (18) | 0.0257 (18) | 0.0095 (16) |
| C21 | 0.098 (3) | 0.0403 (18) | 0.057 (2) | 0.0063 (19) | 0.030 (2) | 0.0084 (16) |
| C22 | 0.0561 (19) | 0.0436 (17) | 0.0435 (16) | 0.0008 (15) | 0.0090 (14) | 0.0040 (14) |
| C23 | 0.062 (2) | 0.0387 (16) | 0.0384 (16) | 0.0033 (15) | 0.0125 (14) | 0.0014 (13) |
| C24 | 0.0542 (19) | 0.0458 (19) | 0.0395 (17) | 0.0143 (15) | 0.0068 (14) | 0.0091 (14) |
| C25 | 0.071 (2) | 0.0432 (17) | 0.0397 (17) | 0.0071 (17) | 0.0006 (15) | 0.0000 (14) |
| C26 | 0.077 (2) | 0.0447 (18) | 0.0380 (17) | 0.0116 (17) | 0.0017 (16) | 0.0011 (14) |
| C27 | 0.091 (3) | 0.0456 (18) | 0.0443 (18) | 0.0001 (19) | 0.0285 (18) | 0.0043 (15) |
| C28 | 0.0564 (19) | 0.0407 (17) | 0.0414 (17) | −0.0062 (15) | 0.0144 (14) | 0.0009 (14) |
| N1 | 0.0623 (18) | 0.0359 (14) | 0.0433 (15) | 0.0001 (13) | 0.0085 (13) | 0.0033 (12) |
| N2 | 0.086 (2) | 0.0386 (14) | 0.0359 (14) | 0.0072 (14) | 0.0062 (14) | 0.0056 (12) |
| N3 | 0.090 (2) | 0.0406 (16) | 0.0440 (17) | −0.0011 (15) | 0.0131 (16) | −0.0001 (14) |
| N4 | 0.082 (2) | 0.0396 (15) | 0.0363 (14) | −0.0004 (14) | 0.0131 (14) | 0.0004 (12) |
| N5 | 0.0685 (18) | 0.0377 (14) | 0.0424 (14) | 0.0028 (13) | 0.0205 (13) | 0.0037 (11) |
| N6 | 0.104 (2) | 0.0340 (14) | 0.0457 (16) | 0.0022 (15) | 0.0258 (16) | 0.0065 (12) |
| N7 | 0.0753 (19) | 0.0424 (16) | 0.0406 (15) | −0.0044 (14) | 0.0153 (14) | −0.0013 (13) |
| N8 | 0.093 (2) | 0.0435 (17) | 0.0388 (15) | −0.0007 (16) | 0.0215 (15) | 0.0025 (13) |
| O1 | 0.083 (2) | 0.0680 (18) | 0.0646 (16) | −0.0093 (15) | 0.0160 (14) | −0.0276 (14) |
| O2 | 0.0966 (19) | 0.0432 (13) | 0.0405 (13) | −0.0050 (13) | 0.0020 (12) | 0.0025 (11) |
| O3 | 0.108 (2) | 0.0544 (16) | 0.0412 (13) | 0.0161 (15) | 0.0071 (13) | 0.0039 (12) |
| O4 | 0.0903 (19) | 0.0466 (13) | 0.0413 (12) | −0.0059 (13) | 0.0210 (12) | −0.0030 (11) |
| O5 | 0.107 (2) | 0.0646 (17) | 0.0525 (15) | 0.0202 (16) | 0.0257 (15) | −0.0042 (13) |
| O6 | 0.133 (3) | 0.0394 (13) | 0.0811 (19) | 0.0060 (16) | 0.0668 (19) | 0.0087 (14) |
| O7 | 0.0839 (18) | 0.0523 (14) | 0.0415 (12) | 0.0089 (13) | 0.0170 (12) | 0.0003 (11) |
| O8 | 0.0798 (17) | 0.0455 (14) | 0.0527 (14) | 0.0036 (13) | 0.0189 (12) | 0.0084 (11) |
| O1W | 0.097 (3) | 0.116 (3) | 0.136 (4) | 0.000 (2) | 0.015 (2) | 0.010 (3) |
| C1—O1 | 1.434 (5) | C17—C18 | 1.336 (5) |
| C1—H1A | 0.9600 | C17—H17 | 0.9300 |
| C1—H1B | 0.9600 | C18—C19 | 1.428 (5) |
| C1—H1C | 0.9600 | C18—H18 | 0.9300 |
| C2—O1 | 1.351 (4) | C19—C22 | 1.394 (5) |
| C2—C7 | 1.383 (5) | C19—C20 | 1.412 (5) |
| C2—C3 | 1.390 (5) | C20—O6 | 1.286 (4) |
| C3—C4 | 1.355 (5) | C20—C21 | 1.420 (5) |
| C3—H3 | 0.9300 | C21—H21 | 0.9300 |
| C4—C5 | 1.409 (4) | C22—N5 | 1.282 (4) |
| C4—H4 | 0.9300 | C22—H22 | 0.9300 |
| C5—C8 | 1.388 (5) | C23—N5 | 1.454 (4) |
| C5—C6 | 1.426 (5) | C23—C24 | 1.525 (4) |
| C6—O2 | 1.286 (4) | C23—C25 | 1.535 (5) |
| C6—C7 | 1.405 (5) | C23—H23 | 0.9800 |
| C7—H7 | 0.9300 | C24—O8 | 1.235 (4) |
| C8—N1 | 1.297 (4) | C24—O7 | 1.253 (4) |
| C8—H8 | 0.9300 | C25—C26 | 1.523 (5) |
| C9—N1 | 1.455 (4) | C25—H25A | 0.9700 |
| C9—C11 | 1.535 (5) | C25—H25B | 0.9700 |
| C9—C10 | 1.537 (4) | C26—C27 | 1.507 (6) |
| C9—H9 | 0.9800 | C26—H26A | 0.9700 |
| C10—O4 | 1.241 (4) | C26—H26B | 0.9700 |
| C10—O3 | 1.245 (4) | C27—N6 | 1.452 (4) |
| C11—C12 | 1.518 (5) | C27—H27A | 0.9700 |
| C11—H11A | 0.9700 | C27—H27B | 0.9700 |
| C11—H11B | 0.9700 | C28—N6 | 1.300 (4) |
| C12—C13 | 1.512 (5) | C28—N8 | 1.321 (4) |
| C12—H12A | 0.9700 | C28—N7 | 1.326 (4) |
| C12—H12B | 0.9700 | N1—H1 | 0.891 (10) |
| C13—N2 | 1.448 (4) | N2—H2 | 0.8600 |
| C13—H13A | 0.9700 | N3—H3A | 0.894 (10) |
| C13—H13B | 0.9700 | N3—H3B | 0.892 (10) |
| C14—N2 | 1.309 (4) | N4—H4A | 0.898 (10) |
| C14—N4 | 1.323 (4) | N4—H4B | 0.894 (10) |
| C14—N3 | 1.330 (4) | N5—H5 | 0.896 (10) |
| C15—O5 | 1.418 (5) | N6—H6 | 0.8600 |
| C15—H15A | 0.9600 | N7—H7A | 0.893 (10) |
| C15—H15B | 0.9600 | N7—H7B | 0.896 (10) |
| C15—H15C | 0.9600 | N8—H8A | 0.898 (10) |
| C16—O5 | 1.346 (4) | N8—H8B | 0.893 (10) |
| C16—C21 | 1.366 (5) | O1W—H1W | 0.940 (10) |
| C16—C17 | 1.393 (6) | O1W—H2W | 0.937 (10) |
| O1—C1—H1A | 109.5 | C19—C18—H18 | 119.4 |
| O1—C1—H1B | 109.5 | C22—C19—C20 | 120.7 (3) |
| H1A—C1—H1B | 109.5 | C22—C19—C18 | 119.5 (3) |
| O1—C1—H1C | 109.5 | C20—C19—C18 | 119.7 (3) |
| H1A—C1—H1C | 109.5 | O6—C20—C19 | 121.4 (3) |
| H1B—C1—H1C | 109.5 | O6—C20—C21 | 121.5 (3) |
| O1—C2—C7 | 123.8 (4) | C19—C20—C21 | 117.1 (3) |
| O1—C2—C3 | 114.9 (3) | C16—C21—C20 | 120.9 (4) |
| C7—C2—C3 | 121.3 (3) | C16—C21—H21 | 119.5 |
| C4—C3—C2 | 118.8 (3) | C20—C21—H21 | 119.5 |
| C4—C3—H3 | 120.6 | N5—C22—C19 | 125.1 (3) |
| C2—C3—H3 | 120.6 | N5—C22—H22 | 117.5 |
| C3—C4—C5 | 122.4 (3) | C19—C22—H22 | 117.5 |
| C3—C4—H4 | 118.8 | N5—C23—C24 | 109.6 (3) |
| C5—C4—H4 | 118.8 | N5—C23—C25 | 108.2 (3) |
| C8—C5—C4 | 119.6 (3) | C24—C23—C25 | 113.1 (3) |
| C8—C5—C6 | 121.6 (3) | N5—C23—H23 | 108.6 |
| C4—C5—C6 | 118.8 (3) | C24—C23—H23 | 108.6 |
| O2—C6—C7 | 121.0 (3) | C25—C23—H23 | 108.6 |
| O2—C6—C5 | 121.1 (3) | O8—C24—O7 | 127.0 (3) |
| C7—C6—C5 | 117.9 (3) | O8—C24—C23 | 118.6 (3) |
| C2—C7—C6 | 120.8 (4) | O7—C24—C23 | 114.5 (3) |
| C2—C7—H7 | 119.6 | C26—C25—C23 | 114.6 (3) |
| C6—C7—H7 | 119.6 | C26—C25—H25A | 108.6 |
| N1—C8—C5 | 125.3 (3) | C23—C25—H25A | 108.6 |
| N1—C8—H8 | 117.3 | C26—C25—H25B | 108.6 |
| C5—C8—H8 | 117.3 | C23—C25—H25B | 108.6 |
| N1—C9—C11 | 108.8 (3) | H25A—C25—H25B | 107.6 |
| N1—C9—C10 | 109.1 (3) | C27—C26—C25 | 112.8 (3) |
| C11—C9—C10 | 112.3 (3) | C27—C26—H26A | 109.0 |
| N1—C9—H9 | 108.8 | C25—C26—H26A | 109.0 |
| C11—C9—H9 | 108.8 | C27—C26—H26B | 109.0 |
| C10—C9—H9 | 108.8 | C25—C26—H26B | 109.0 |
| O4—C10—O3 | 126.4 (3) | H26A—C26—H26B | 107.8 |
| O4—C10—C9 | 115.6 (3) | N6—C27—C26 | 114.0 (3) |
| O3—C10—C9 | 117.9 (3) | N6—C27—H27A | 108.8 |
| C12—C11—C9 | 116.7 (3) | C26—C27—H27A | 108.8 |
| C12—C11—H11A | 108.1 | N6—C27—H27B | 108.8 |
| C9—C11—H11A | 108.1 | C26—C27—H27B | 108.8 |
| C12—C11—H11B | 108.1 | H27A—C27—H27B | 107.7 |
| C9—C11—H11B | 108.1 | N6—C28—N8 | 121.3 (3) |
| H11A—C11—H11B | 107.3 | N6—C28—N7 | 120.1 (3) |
| C13—C12—C11 | 114.1 (3) | N8—C28—N7 | 118.6 (3) |
| C13—C12—H12A | 108.7 | C8—N1—C9 | 125.7 (3) |
| C11—C12—H12A | 108.7 | C8—N1—H1 | 116 (2) |
| C13—C12—H12B | 108.7 | C9—N1—H1 | 118 (2) |
| C11—C12—H12B | 108.7 | C14—N2—C13 | 123.9 (3) |
| H12A—C12—H12B | 107.6 | C14—N2—H2 | 118.0 |
| N2—C13—C12 | 111.3 (3) | C13—N2—H2 | 118.0 |
| N2—C13—H13A | 109.4 | C14—N3—H3A | 118 (3) |
| C12—C13—H13A | 109.4 | C14—N3—H3B | 119 (2) |
| N2—C13—H13B | 109.4 | H3A—N3—H3B | 122 (4) |
| C12—C13—H13B | 109.4 | C14—N4—H4A | 118 (2) |
| H13A—C13—H13B | 108.0 | C14—N4—H4B | 125 (3) |
| N2—C14—N4 | 121.7 (3) | H4A—N4—H4B | 117 (3) |
| N2—C14—N3 | 119.8 (3) | C22—N5—C23 | 124.8 (3) |
| N4—C14—N3 | 118.4 (3) | C22—N5—H5 | 117 (2) |
| O5—C15—H15A | 109.5 | C23—N5—H5 | 118 (2) |
| O5—C15—H15B | 109.5 | C28—N6—C27 | 123.2 (3) |
| H15A—C15—H15B | 109.5 | C28—N6—H6 | 118.4 |
| O5—C15—H15C | 109.5 | C27—N6—H6 | 118.4 |
| H15A—C15—H15C | 109.5 | C28—N7—H7A | 115 (2) |
| H15B—C15—H15C | 109.5 | C28—N7—H7B | 115 (2) |
| O5—C16—C21 | 124.5 (4) | H7A—N7—H7B | 127 (3) |
| O5—C16—C17 | 114.1 (3) | C28—N8—H8A | 121 (2) |
| C21—C16—C17 | 121.4 (3) | C28—N8—H8B | 120 (2) |
| C18—C17—C16 | 119.6 (3) | H8A—N8—H8B | 118 (3) |
| C18—C17—H17 | 120.2 | C2—O1—C1 | 118.2 (3) |
| C16—C17—H17 | 120.2 | C16—O5—C15 | 118.8 (3) |
| C17—C18—C19 | 121.2 (3) | H1W—O1W—H2W | 110.4 (17) |
| C17—C18—H18 | 119.4 | ||
| O1—C2—C3—C4 | −178.2 (3) | C18—C19—C20—C21 | 2.6 (5) |
| C7—C2—C3—C4 | 2.5 (5) | O5—C16—C21—C20 | 179.4 (4) |
| C2—C3—C4—C5 | −1.2 (5) | C17—C16—C21—C20 | −1.6 (6) |
| C3—C4—C5—C8 | 179.9 (3) | O6—C20—C21—C16 | 179.2 (4) |
| C3—C4—C5—C6 | −1.0 (5) | C19—C20—C21—C16 | −1.0 (6) |
| C8—C5—C6—O2 | 1.2 (5) | C20—C19—C22—N5 | 0.0 (5) |
| C4—C5—C6—O2 | −177.9 (3) | C18—C19—C22—N5 | 176.9 (3) |
| C8—C5—C6—C7 | −178.9 (3) | N5—C23—C24—O8 | −18.7 (4) |
| C4—C5—C6—C7 | 2.0 (4) | C25—C23—C24—O8 | 102.2 (4) |
| O1—C2—C7—C6 | 179.3 (3) | N5—C23—C24—O7 | 161.9 (3) |
| C3—C2—C7—C6 | −1.5 (5) | C25—C23—C24—O7 | −77.3 (4) |
| O2—C6—C7—C2 | 179.1 (3) | N5—C23—C25—C26 | −178.7 (3) |
| C5—C6—C7—C2 | −0.8 (5) | C24—C23—C25—C26 | 59.7 (4) |
| C4—C5—C8—N1 | 178.1 (3) | C23—C25—C26—C27 | 57.0 (4) |
| C6—C5—C8—N1 | −1.1 (5) | C25—C26—C27—N6 | −179.2 (3) |
| N1—C9—C10—O4 | 167.8 (3) | C5—C8—N1—C9 | −174.4 (3) |
| C11—C9—C10—O4 | −71.5 (4) | C11—C9—N1—C8 | 60.9 (4) |
| N1—C9—C10—O3 | −14.6 (4) | C10—C9—N1—C8 | −176.2 (3) |
| C11—C9—C10—O3 | 106.2 (4) | N4—C14—N2—C13 | 6.0 (5) |
| N1—C9—C11—C12 | 178.7 (3) | N3—C14—N2—C13 | −175.9 (3) |
| C10—C9—C11—C12 | 57.7 (4) | C12—C13—N2—C14 | 79.9 (4) |
| C9—C11—C12—C13 | 55.3 (4) | C19—C22—N5—C23 | −177.9 (3) |
| C11—C12—C13—N2 | −179.3 (3) | C24—C23—N5—C22 | −155.8 (3) |
| O5—C16—C17—C18 | −178.4 (3) | C25—C23—N5—C22 | 80.4 (4) |
| C21—C16—C17—C18 | 2.5 (6) | N8—C28—N6—C27 | −1.6 (6) |
| C16—C17—C18—C19 | −0.8 (6) | N7—C28—N6—C27 | 178.4 (3) |
| C17—C18—C19—C22 | −178.7 (3) | C26—C27—N6—C28 | 83.0 (5) |
| C17—C18—C19—C20 | −1.8 (5) | C7—C2—O1—C1 | −11.4 (5) |
| C22—C19—C20—O6 | −0.7 (5) | C3—C2—O1—C1 | 169.3 (3) |
| C18—C19—C20—O6 | −177.6 (4) | C21—C16—O5—C15 | −9.9 (6) |
| C22—C19—C20—C21 | 179.5 (3) | C17—C16—O5—C15 | 171.0 (4) |
| H··· | ||||
| N1—H1···O2 | 0.89 (1) | 1.94 (3) | 2.638 (4) | 134 (3) |
| N4—H4 | 0.90 (1) | 2.06 (1) | 2.935 (4) | 165 (3) |
| N5—H5···O6 | 0.90 (1) | 1.90 (3) | 2.600 (4) | 134 (3) |
| N8—H8 | 0.90 (1) | 2.03 (1) | 2.914 (4) | 166 (3) |
| N2—H2···O2i | 0.86 | 1.92 | 2.758 (4) | 166 |
| N3—H3 | 0.89 (1) | 2.58 (3) | 3.333 (4) | 142 (3) |
| N3—H3 | 0.89 (1) | 1.93 (1) | 2.817 (4) | 175 (4) |
| N4—H4 | 0.89 (1) | 2.03 (1) | 2.912 (4) | 171 (3) |
| N6—H6···O6iii | 0.86 | 1.89 | 2.705 (4) | 158 |
| N7—H7 | 0.89 (1) | 2.50 (3) | 3.202 (4) | 135 (3) |
| N7—H7 | 0.90 (1) | 1.91 (1) | 2.800 (4) | 173 (3) |
| N8—H8 | 0.89 (1) | 2.05 (2) | 2.911 (4) | 161 (3) |
| O1 | 0.94 (1) | 2.33 (6) | 2.882 (5) | 117 (4) |
| O1 | 0.94 (1) | 1.98 (2) | 2.881 (5) | 159 (6) |
| C15—H15 | 0.96 | 2.56 | 3.451 (7) | 155 |
| C22—H22···O1 | 0.93 | 2.53 | 3.359 (6) | 149 |
| C1—H1 | 0.96 | 2.96 | 3.669 (4) | 132 |
| C15—H15 | 0.96 | 2.98 | 3.762 (5) | 139 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O2 | 0.89 (1) | 1.94 (3) | 2.638 (4) | 134 (3) |
| N4—H4 | 0.90 (1) | 2.06 (1) | 2.935 (4) | 165 (3) |
| N5—H5⋯O6 | 0.90 (1) | 1.90 (3) | 2.600 (4) | 134 (3) |
| N8—H8 | 0.90 (1) | 2.03 (1) | 2.914 (4) | 166 (3) |
| N2—H2⋯O2i | 0.86 | 1.92 | 2.758 (4) | 166 |
| N3—H3 | 0.89 (1) | 2.58 (3) | 3.333 (4) | 142 (3) |
| N3—H3 | 0.89 (1) | 1.93 (1) | 2.817 (4) | 175 (4) |
| N4—H4 | 0.89 (1) | 2.03 (1) | 2.912 (4) | 171 (3) |
| N6—H6⋯O6iii | 0.86 | 1.89 | 2.705 (4) | 158 |
| N7—H7 | 0.89 (1) | 2.50 (3) | 3.202 (4) | 135 (3) |
| N7—H7 | 0.90 (1) | 1.91 (1) | 2.800 (4) | 173 (3) |
| N8—H8 | 0.89 (1) | 2.05 (2) | 2.911 (4) | 161 (3) |
| O1 | 0.94 (1) | 1.98 (2) | 2.881 (5) | 159 (6) |
| C15—H15 | 0.96 | 2.56 | 3.451 (7) | 155 |
| C22—H22⋯O1 | 0.93 | 2.53 | 3.359 (6) | 149 |
| C1—H1 | 0.96 | 2.96 | 3.669 (4) | 132 |
| C15—H15 | 0.96 | 2.98 | 3.762 (5) | 139 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .