Literature DB >> 24823649

Reading RNA methylation codes through methyl-specific binding proteins.

Xiao Wang1, Chuan He1.   

Abstract

N (6)-methyladenosine (m (6)A) is a prevalent modification of eukaryotic mRNAs. It regulates yeast cell fate and is essential to the development and fertility of metazoans. Although its presence in mRNA has been known since the early 1970s, the function of m (6)A remained a mystery until the spate of discoveries in the past three years. Here, we focus on the discovery of m (6)A "readers" (proteins that specifically recognize m (6)A), and their functions in tuning mRNA stability, as well as the broader significance of such m (6)A-dependent regulation of gene expression.

Entities:  

Keywords:  N6-methyladenosine; RNA methylation; RNA stability; RNA-binding protein; YTH domain; YTHDF2; gene expression regulation; m6A; reversible RNA modification

Mesh:

Substances:

Year:  2014        PMID: 24823649      PMCID: PMC4156498          DOI: 10.4161/rna.28829

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  28 in total

Review 1.  DNA methylation patterns and epigenetic memory.

Authors:  Adrian Bird
Journal:  Genes Dev       Date:  2002-01-01       Impact factor: 11.361

2.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

3.  DNA methylation inhibits transcription indirectly via a methyl-CpG binding protein.

Authors:  J Boyes; A Bird
Journal:  Cell       Date:  1991-03-22       Impact factor: 41.582

Review 4.  The formation of internal 6-methyladenine residues in eucaryotic messenger RNA.

Authors:  M T Tuck
Journal:  Int J Biochem       Date:  1992-03

5.  Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: a potential mechanism for the activity of the IME4 gene.

Authors:  Mary J Clancy; Mary Eileen Shambaugh; Candace S Timpte; Joseph A Bokar
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

6.  Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase.

Authors:  J A Bokar; M E Shambaugh; D Polayes; A G Matera; F M Rottman
Journal:  RNA       Date:  1997-11       Impact factor: 4.942

7.  IME4, a gene that mediates MAT and nutritional control of meiosis in Saccharomyces cerevisiae.

Authors:  J C Shah; M J Clancy
Journal:  Mol Cell Biol       Date:  1992-03       Impact factor: 4.272

8.  MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor.

Authors:  Silin Zhong; Hongying Li; Zsuzsanna Bodi; James Button; Laurent Vespa; Michel Herzog; Rupert G Fray
Journal:  Plant Cell       Date:  2008-05-27       Impact factor: 11.277

9.  Nucleotide sequences at the N6-methyladenosine sites of HeLa cell messenger ribonucleic acid.

Authors:  C M Wei; B Moss
Journal:  Biochemistry       Date:  1977-04-19       Impact factor: 3.162

10.  A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.

Authors:  Jianzhao Liu; Yanan Yue; Dali Han; Xiao Wang; Ye Fu; Liang Zhang; Guifang Jia; Miao Yu; Zhike Lu; Xin Deng; Qing Dai; Weizhong Chen; Chuan He
Journal:  Nat Chem Biol       Date:  2013-12-06       Impact factor: 15.040

View more
  55 in total

1.  N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency.

Authors:  Xiao Wang; Boxuan Simen Zhao; Ian A Roundtree; Zhike Lu; Dali Han; Honghui Ma; Xiaocheng Weng; Kai Chen; Hailing Shi; Chuan He
Journal:  Cell       Date:  2015-06-04       Impact factor: 41.582

2.  A Unified Model for the Function of YTHDF Proteins in Regulating m6A-Modified mRNA.

Authors:  Sara Zaccara; Samie R Jaffrey
Journal:  Cell       Date:  2020-06-02       Impact factor: 41.582

Review 3.  Epigenetic role of N6-methyladenosine (m6A) RNA methylation in the cardiovascular system.

Authors:  Kun Zhao; Chuan-Xi Yang; Peng Li; Wei Sun; Xiang-Qing Kong
Journal:  J Zhejiang Univ Sci B       Date:  2020-07       Impact factor: 3.066

4.  ALKBH5-dependent m6A demethylation controls splicing and stability of long 3'-UTR mRNAs in male germ cells.

Authors:  Chong Tang; Rachel Klukovich; Hongying Peng; Zhuqing Wang; Tian Yu; Ying Zhang; Huili Zheng; Arne Klungland; Wei Yan
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-26       Impact factor: 11.205

Review 5.  The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion.

Authors:  Guramrit Singh; Gabriel Pratt; Gene W Yeo; Melissa J Moore
Journal:  Annu Rev Biochem       Date:  2015-03-11       Impact factor: 23.643

6.  Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation.

Authors:  Leila Touat-Todeschini; Yuichi Shichino; Mathieu Dangin; Nicolas Thierry-Mieg; Benoit Gilquin; Edwige Hiriart; Ravi Sachidanandam; Emeline Lambert; Janine Brettschneider; Michael Reuter; Jan Kadlec; Ramesh Pillai; Akira Yamashita; Masayuki Yamamoto; André Verdel
Journal:  EMBO J       Date:  2017-08-01       Impact factor: 11.598

Review 7.  Acquisition of oocyte competence to develop as an embryo: integrated nuclear and cytoplasmic events.

Authors:  Marco Conti; Federica Franciosi
Journal:  Hum Reprod Update       Date:  2018-05-01       Impact factor: 15.610

8.  CLIP-seq analysis of multi-mapped reads discovers novel functional RNA regulatory sites in the human transcriptome.

Authors:  Zijun Zhang; Yi Xing
Journal:  Nucleic Acids Res       Date:  2017-09-19       Impact factor: 16.971

9.  m6A modulates neuronal functions and sex determination in Drosophila.

Authors:  Tina Lence; Junaid Akhtar; Marc Bayer; Katharina Schmid; Laura Spindler; Cheuk Hei Ho; Nastasja Kreim; Miguel A Andrade-Navarro; Burkhard Poeck; Mark Helm; Jean-Yves Roignant
Journal:  Nature       Date:  2016-11-30       Impact factor: 49.962

10.  The YTH Domain Protein ECT2 Is an m6A Reader Required for Normal Trichome Branching in Arabidopsis.

Authors:  Jérémy Scutenaire; Jean-Marc Deragon; Viviane Jean; Moussa Benhamed; Cécile Raynaud; Jean-Jacques Favory; Rémy Merret; Cécile Bousquet-Antonelli
Journal:  Plant Cell       Date:  2018-04-04       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.