Literature DB >> 24815857

Faster fluorescence microscopy: advances in high speed biological imaging.

Peter W Winter1, Hari Shroff2.   

Abstract

The past decade has seen explosive growth in new high speed imaging methods. These can broadly be classified as either point-scanning (which offer better depth penetration) or parallelized systems (which offer higher speed). We discuss each class generally, and cover specific advances in diffraction-limited microscopes (laser-scanning confocal, spinning-disk, and light-sheet) and superresolution microscopes (single-molecule imaging, stimulated emission-depletion, and structured illumination). A theme of our review is that there is no free lunch: each technique has strengths and weaknesses, and an advance in speed usually comes at the expense of either spatial resolution or depth penetration. Published by Elsevier Ltd.

Entities:  

Mesh:

Year:  2014        PMID: 24815857      PMCID: PMC4096075          DOI: 10.1016/j.cbpa.2014.04.008

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  47 in total

1.  Super-resolution 3D microscopy of live whole cells using structured illumination.

Authors:  Lin Shao; Peter Kner; E Hesper Rego; Mats G L Gustafsson
Journal:  Nat Methods       Date:  2011-10-16       Impact factor: 28.547

2.  Live-cell 3D super-resolution imaging in thick biological samples.

Authors:  Francesca Cella Zanacchi; Zeno Lavagnino; Michela Perrone Donnorso; Alessio Del Bue; Laura Furia; Mario Faretta; Alberto Diaspro
Journal:  Nat Methods       Date:  2011-10-09       Impact factor: 28.547

3.  Resolution doubling in fluorescence microscopy with confocal spinning-disk image scanning microscopy.

Authors:  Olaf Schulz; Christoph Pieper; Michaela Clever; Janine Pfaff; Aike Ruhlandt; Ralph H Kehlenbach; Fred S Wouters; Jörg Großhans; Gertrude Bunt; Jörg Enderlein
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

4.  Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light.

Authors:  Tina Schrödel; Robert Prevedel; Karin Aumayr; Manuel Zimmer; Alipasha Vaziri
Journal:  Nat Methods       Date:  2013-09-08       Impact factor: 28.547

5.  Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.

Authors:  Yicong Wu; Peter Wawrzusin; Justin Senseney; Robert S Fischer; Ryan Christensen; Anthony Santella; Andrew G York; Peter W Winter; Clare M Waterman; Zhirong Bao; Daniel A Colón-Ramos; Matthew McAuliffe; Hari Shroff
Journal:  Nat Biotechnol       Date:  2013-10-13       Impact factor: 54.908

6.  Nanoscopy with more than 100,000 'doughnuts'.

Authors:  Andriy Chmyrov; Jan Keller; Tim Grotjohann; Michael Ratz; Elisa d'Este; Stefan Jakobs; Christian Eggeling; Stefan W Hell
Journal:  Nat Methods       Date:  2013-07-07       Impact factor: 28.547

7.  Simultaneous multiple-emitter fitting for single molecule super-resolution imaging.

Authors:  Fang Huang; Samantha L Schwartz; Jason M Byars; Keith A Lidke
Journal:  Biomed Opt Express       Date:  2011-04-29       Impact factor: 3.732

8.  Fast, three-dimensional super-resolution imaging of live cells.

Authors:  Sara A Jones; Sang-Hee Shim; Jiang He; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2011-05-08       Impact factor: 28.547

9.  Resolution doubling in live, multicellular organisms via multifocal structured illumination microscopy.

Authors:  Andrew G York; Sapun H Parekh; Damian Dalle Nogare; Robert S Fischer; Kelsey Temprine; Marina Mione; Ajay B Chitnis; Christian A Combs; Hari Shroff
Journal:  Nat Methods       Date:  2012-05-13       Impact factor: 28.547

10.  Video-rate nanoscopy using sCMOS camera-specific single-molecule localization algorithms.

Authors:  Fang Huang; Tobias M P Hartwich; Felix E Rivera-Molina; Yu Lin; Whitney C Duim; Jane J Long; Pradeep D Uchil; Jordan R Myers; Michelle A Baird; Walther Mothes; Michael W Davidson; Derek Toomre; Joerg Bewersdorf
Journal:  Nat Methods       Date:  2013-05-26       Impact factor: 28.547

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  28 in total

1.  Whole-animal functional and developmental imaging with isotropic spatial resolution.

Authors:  Raghav K Chhetri; Fernando Amat; Yinan Wan; Burkhard Höckendorf; William C Lemon; Philipp J Keller
Journal:  Nat Methods       Date:  2015-10-26       Impact factor: 28.547

2.  Isotropic Light-Sheet Microscopy and Automated Cell Lineage Analyses to Catalogue Caenorhabditis elegans Embryogenesis with Subcellular Resolution.

Authors:  Leighton H Duncan; Mark W Moyle; Lin Shao; Titas Sengupta; Richard Ikegami; Abhishek Kumar; Min Guo; Ryan Christensen; Anthony Santella; Zhirong Bao; Hari Shroff; William Mohler; Daniel A Colón-Ramos
Journal:  J Vis Exp       Date:  2019-06-06       Impact factor: 1.355

3.  Using Stage- and Slit-Scanning to Improve Contrast and Optical Sectioning in Dual-View Inverted Light Sheet Microscopy (diSPIM).

Authors:  Abhishek Kumar; Ryan Christensen; Min Guo; Panos Chandris; William Duncan; Yicong Wu; Anthony Santella; Mark Moyle; Peter W Winter; Daniel Colón-Ramos; Zhirong Bao; Hari Shroff
Journal:  Biol Bull       Date:  2016-08       Impact factor: 1.818

4.  Superresolution live imaging of plant cells using structured illumination microscopy.

Authors:  George Komis; Martin Mistrik; Olga Šamajová; Miroslav Ovečka; Jiri Bartek; Jozef Šamaj
Journal:  Nat Protoc       Date:  2015-07-23       Impact factor: 13.491

5.  Optimizing and extending light-sculpting microscopy for fast functional imaging in neuroscience.

Authors:  Peter Rupprecht; Robert Prevedel; Florian Groessl; Wulf E Haubensak; Alipasha Vaziri
Journal:  Biomed Opt Express       Date:  2015-01-08       Impact factor: 3.732

6.  Imaging Subcellular Dynamics with Fast and Light-Efficient Volumetrically Parallelized Microscopy.

Authors:  Kevin M Dean; Philippe Roudot; Erik S Welf; Theresa Pohlkamp; Gerard Garrelts; Joachim Herz; Reto Fiolka
Journal:  Optica       Date:  2017-02-20       Impact factor: 11.104

7.  Multi-MHz laser-scanning single-cell fluorescence microscopy by spatiotemporally encoded virtual source array.

Authors:  Jianglai Wu; Anson H L Tang; Aaron T Y Mok; Wenwei Yan; Godfrey C F Chan; Kenneth K Y Wong; Kevin K Tsia
Journal:  Biomed Opt Express       Date:  2017-08-21       Impact factor: 3.732

8.  Improved contrast in inverted selective plane illumination microscopy of thick tissues using confocal detection and structured illumination.

Authors:  Bihe Hu; Daniel Bolus; J Quincy Brown
Journal:  Biomed Opt Express       Date:  2017-11-13       Impact factor: 3.732

9.  Two-photon instant structured illumination microscopy improves the depth penetration of super-resolution imaging in thick scattering samples.

Authors:  Peter W Winter; Andrew G York; Damian Dalle Nogare; Maria Ingaramo; Ryan Christensen; Ajay Chitnis; George H Patterson; Hari Shroff
Journal:  Optica       Date:  2014-09-20       Impact factor: 11.104

10.  Using Fluorescence Microscopy to Study Mitosis.

Authors:  Sai K Balchand; Barbara J Mann; Patricia Wadsworth
Journal:  Methods Mol Biol       Date:  2016
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