Literature DB >> 24768308

Genome mining reveals a minimum gene set for the biosynthesis of 32-membered macrocyclic thiopeptides lactazoles.

Shohei Hayashi1, Taro Ozaki1, Shumpei Asamizu1, Haruo Ikeda2, Satoshi Ōmura3, Naoya Oku4, Yasuhiro Igarashi4, Hiroshi Tomoda5, Hiroyasu Onaka6.   

Abstract

Although >100 thiopeptides have been discovered, the number of validated gene clusters involved in their biosynthesis is lagging. We use genome mining to identify a silent thiopeptide biosynthetic gene cluster responsible for biosynthesis of lactazoles. Lactazoles are structurally unique thiopeptides with a 32-membered macrocycle and a 2-oxazolyl-6-thiazolyl pyridine core. We demonstrate that lactazoles originate from the simplest cluster, containing only six unidirectional genes (lazA to lazF). We show that lazC is involved in the macrocyclization process, leading to central pyridine moiety formation. Substitution of the endogenous promoter with a strong promoter results in an approximately 30-fold increase in lactazole A production and mutagenesis of lazC precursor gene in production of two analogs. Lactazoles do not exhibit antimicrobial activity but may modulate signaling cascades triggered by bone morphogenetic protein. Our approach facilitates the production of a more diverse set of thiopeptide structures, increasing the semisynthetic repertoire for use in drug development.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24768308     DOI: 10.1016/j.chembiol.2014.03.008

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  23 in total

Review 1.  Elucidating and engineering thiopeptide biosynthesis.

Authors:  Philip R Bennallack; Joel S Griffitts
Journal:  World J Microbiol Biotechnol       Date:  2017-05-11       Impact factor: 3.312

2.  Capture of micrococcin biosynthetic intermediates reveals C-terminal processing as an obligatory step for in vivo maturation.

Authors:  Kathryn D Bewley; Philip R Bennallack; Mark A Burlingame; Richard A Robison; Joel S Griffitts; Susan M Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

Review 3.  Biosynthesis and Chemical Applications of Thioamides.

Authors:  Nilkamal Mahanta; D Miklos Szantai-Kis; E James Petersson; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-01-30       Impact factor: 5.100

4.  Characterization of a Dehydratase and Methyltransferase in the Biosynthesis of Ribosomally Synthesized and Post-translationally Modified Peptides in Lachnospiraceae.

Authors:  Liujie Huo; Xiling Zhao; Jeella Z Acedo; Paola Estrada; Satish K Nair; Wilfred A van der Donk
Journal:  Chembiochem       Date:  2019-11-04       Impact factor: 3.164

Review 5.  Thiopeptides: antibiotics with unique chemical structures and diverse biological activities.

Authors:  Derek C K Chan; Lori L Burrows
Journal:  J Antibiot (Tokyo)       Date:  2020-12-21       Impact factor: 2.649

Review 6.  RiPP antibiotics: biosynthesis and engineering potential.

Authors:  Graham A Hudson; Douglas A Mitchell
Journal:  Curr Opin Microbiol       Date:  2018-03-10       Impact factor: 7.934

7.  Bioinformatic Expansion and Discovery of Thiopeptide Antibiotics.

Authors:  Christopher J Schwalen; Graham A Hudson; Bryce Kille; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2018-07-20       Impact factor: 15.419

8.  Flexizyme-Enabled Benchtop Biosynthesis of Thiopeptides.

Authors:  Steven R Fleming; Tessa E Bartges; Alexander A Vinogradov; Christine L Kirkpatrick; Yuki Goto; Hiroaki Suga; Leslie M Hicks; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

Review 9.  New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products.

Authors:  Manuel A Ortega; Wilfred A van der Donk
Journal:  Cell Chem Biol       Date:  2016-01-21       Impact factor: 8.116

10.  Reconstitution and Minimization of a Micrococcin Biosynthetic Pathway in Bacillus subtilis.

Authors:  Philip R Bennallack; Kathryn D Bewley; Mark A Burlingame; Richard A Robison; Susan M Miller; Joel S Griffitts
Journal:  J Bacteriol       Date:  2016-08-25       Impact factor: 3.490

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