Literature DB >> 27381911

Reconstitution and Minimization of a Micrococcin Biosynthetic Pathway in Bacillus subtilis.

Philip R Bennallack1, Kathryn D Bewley2, Mark A Burlingame2, Richard A Robison1, Susan M Miller2, Joel S Griffitts3.   

Abstract

UNLABELLED: Thiopeptides represent one of several families of highly modified peptide antibiotics that hold great promise for natural product engineering. These macrocyclic peptides are produced by a combination of ribosomal synthesis and extensive posttranslational modification by dedicated processing enzymes. We previously identified a compact, plasmid-borne gene cluster for the biosynthesis of micrococcin P1 (MP1), an archetypal thiopeptide antibiotic. In an effort to genetically dissect this pathway, we have reconstituted it in Bacillus subtilis Successful MP1 production required promoter engineering and the reassembly of essential biosynthetic genes in a modular plasmid. The resulting system allows for rapid pathway manipulation, including protein tagging and gene deletion. We find that 8 processing proteins are sufficient for the production of MP1 and that the tailoring enzyme TclS catalyzes a C-terminal reduction step that distinguishes MP1 from its sister compound micrococcin P2. IMPORTANCE: The emergence of antibiotic resistance is one of the most urgent human health concerns of our day. A crucial component in an integrated strategy for countering antibiotic resistance is the ability to engineer pathways for the biosynthesis of natural and derivatized antimicrobial compounds. In this study, the model organism B. subtilis was employed to reconstitute and genetically modularize a 9-gene system for the biosynthesis of micrococcin, the founding member of a growing family of thiopeptide antibiotics.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27381911      PMCID: PMC4999933          DOI: 10.1128/JB.00396-16

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  38 in total

1.  Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB.

Authors:  Manuel A Ortega; Yue Hao; Qi Zhang; Mark C Walker; Wilfred A van der Donk; Satish K Nair
Journal:  Nature       Date:  2014-10-26       Impact factor: 49.962

2.  Characterization of a novel plasmid-borne thiopeptide gene cluster in Staphylococcus epidermidis strain 115.

Authors:  Philip R Bennallack; Scott R Burt; Michael J Heder; Richard A Robison; Joel S Griffitts
Journal:  J Bacteriol       Date:  2014-10-13       Impact factor: 3.490

3.  Genome mining reveals a minimum gene set for the biosynthesis of 32-membered macrocyclic thiopeptides lactazoles.

Authors:  Shohei Hayashi; Taro Ozaki; Shumpei Asamizu; Haruo Ikeda; Satoshi Ōmura; Naoya Oku; Yasuhiro Igarashi; Hiroshi Tomoda; Hiroyasu Onaka
Journal:  Chem Biol       Date:  2014-04-24

4.  Disruptive innovations: new anti-infectives in the age of resistance.

Authors:  George P Tegos; Michael R Hamblin
Journal:  Curr Opin Pharmacol       Date:  2013-09-05       Impact factor: 5.547

5.  Construction of plasmid-based expression vectors for Bacillus subtilis exhibiting full structural stability.

Authors:  Hoang Duc Nguyen; Quynh Anh Nguyen; Rita C Ferreira; Luis C S Ferreira; Linh Thuoc Tran; Wolfgang Schumann
Journal:  Plasmid       Date:  2005-07-11       Impact factor: 3.466

6.  Staphylococcosis of turkeys. 3. Bacterial interference as a possible means of control.

Authors:  C M Meyers; M M Jensen
Journal:  Avian Dis       Date:  1987 Jan-Mar       Impact factor: 1.577

7.  Generation of thiocillin ring size variants by prepeptide gene replacement and in vivo processing by Bacillus cereus.

Authors:  Albert A Bowers; Michael G Acker; Travis S Young; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2012-06-15       Impact factor: 15.419

8.  Ribosomally synthesized thiopeptide antibiotics targeting elongation factor Tu.

Authors:  Rowan P Morris; Jennifer A Leeds; Hans Ulrich Naegeli; Lukas Oberer; Klaus Memmert; Eric Weber; Matthew J LaMarche; Christian N Parker; Nathalie Burrer; Stacey Esterow; Andreas E Hein; Esther K Schmitt; Philipp Krastel
Journal:  J Am Chem Soc       Date:  2009-04-29       Impact factor: 15.419

Review 9.  Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature.

Authors:  Paul G Arnison; Mervyn J Bibb; Gabriele Bierbaum; Albert A Bowers; Tim S Bugni; Grzegorz Bulaj; Julio A Camarero; Dominic J Campopiano; Gregory L Challis; Jon Clardy; Paul D Cotter; David J Craik; Michael Dawson; Elke Dittmann; Stefano Donadio; Pieter C Dorrestein; Karl-Dieter Entian; Michael A Fischbach; John S Garavelli; Ulf Göransson; Christian W Gruber; Daniel H Haft; Thomas K Hemscheidt; Christian Hertweck; Colin Hill; Alexander R Horswill; Marcel Jaspars; Wendy L Kelly; Judith P Klinman; Oscar P Kuipers; A James Link; Wen Liu; Mohamed A Marahiel; Douglas A Mitchell; Gert N Moll; Bradley S Moore; Rolf Müller; Satish K Nair; Ingolf F Nes; Gillian E Norris; Baldomero M Olivera; Hiroyasu Onaka; Mark L Patchett; Joern Piel; Martin J T Reaney; Sylvie Rebuffat; R Paul Ross; Hans-Georg Sahl; Eric W Schmidt; Michael E Selsted; Konstantin Severinov; Ben Shen; Kaarina Sivonen; Leif Smith; Torsten Stein; Roderich D Süssmuth; John R Tagg; Gong-Li Tang; Andrew W Truman; John C Vederas; Christopher T Walsh; Jonathan D Walton; Silke C Wenzel; Joanne M Willey; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2013-01       Impact factor: 13.423

Review 10.  Thiopeptide antibiotics: retrospective and recent advances.

Authors:  Xavier Just-Baringo; Fernando Albericio; Mercedes Álvarez
Journal:  Mar Drugs       Date:  2014-01-17       Impact factor: 5.118

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  8 in total

Review 1.  Elucidating and engineering thiopeptide biosynthesis.

Authors:  Philip R Bennallack; Joel S Griffitts
Journal:  World J Microbiol Biotechnol       Date:  2017-05-11       Impact factor: 3.312

2.  Capture of micrococcin biosynthetic intermediates reveals C-terminal processing as an obligatory step for in vivo maturation.

Authors:  Kathryn D Bewley; Philip R Bennallack; Mark A Burlingame; Richard A Robison; Joel S Griffitts; Susan M Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

Review 3.  Comparison of Antibiotic Resistance Mechanisms in Antibiotic-Producing and Pathogenic Bacteria.

Authors:  Hiroshi Ogawara
Journal:  Molecules       Date:  2019-09-21       Impact factor: 4.411

4.  Genome-Based Characterization of a Plasmid-Associated Micrococcin P1 Biosynthetic Gene Cluster and Virulence Factors in Mammaliicoccus sciuri IMDO-S72.

Authors:  David Van der Veken; Charlie Hollanders; Marko Verce; Chris Michiels; Steven Ballet; Stefan Weckx; Frédéric Leroy
Journal:  Appl Environ Microbiol       Date:  2021-12-22       Impact factor: 5.005

Review 5.  YcaO-Dependent Posttranslational Amide Activation: Biosynthesis, Structure, and Function.

Authors:  Brandon J Burkhart; Christopher J Schwalen; Greg Mann; James H Naismith; Douglas A Mitchell
Journal:  Chem Rev       Date:  2017-03-03       Impact factor: 60.622

Review 6.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

7.  Minimal lactazole scaffold for in vitro thiopeptide bioengineering.

Authors:  Alexander A Vinogradov; Morito Shimomura; Yuki Goto; Taro Ozaki; Shumpei Asamizu; Yoshinori Sugai; Hiroaki Suga; Hiroyasu Onaka
Journal:  Nat Commun       Date:  2020-05-08       Impact factor: 14.919

8.  A Strong Synergy Between the Thiopeptide Bacteriocin Micrococcin P1 and Rifampicin Against MRSA in a Murine Skin Infection Model.

Authors:  Kirill V Ovchinnikov; Christian Kranjec; Amar Telke; Morten Kjos; Tage Thorstensen; Siegfried Scherer; Harald Carlsen; Dzung B Diep
Journal:  Front Immunol       Date:  2021-07-02       Impact factor: 7.561

  8 in total

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