| Literature DB >> 24764844 |
P B Sreeja1, M Sithambaresan2, N Aiswarya3, M R Prathapachandra Kurup3.
Abstract
The title compound, C14H12FN3O, adopts an E conformation with respect to the azomethine double bond whereas the N and methyl C atoms are in a Z conformation with respect to the same bond. The ketonic O and azomethine N atoms are cis to each other. The non-planar mol-ecule [the dihedral angle between the benzene rings is 7.44 (11)°] exists in an amido form with a C=O bond length of 1.221 (2) Å. In the crystal, a bifurcated N-H⋯(O,N) hydrogen bond is formed between the amide H atom and the keto O and imine N atoms of an adjacent mol-ecule, leading to the formation of chains propagating along the b-axis direction. Through a 180° rotation of the fluoro-phenyl ring, the F atom is disordered over two sites with an occupancy ratio of 0.632 (4):0.368 (4).Entities:
Year: 2014 PMID: 24764844 PMCID: PMC3998283 DOI: 10.1107/S1600536813035009
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12FN3O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2n 2ab | Cell parameters from 2433 reflections |
| θ = 2.5–22.6° | |
| µ = 0.10 mm−1 | |
| Needle, colourless | |
| 0.50 × 0.25 × 0.20 mm |
| Bruker ApexII CCD diffractometer | 3009 independent reflections |
| Radiation source: fine-focus sealed tube | 1755 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.33 pixels mm-1 | θmax = 28.0°, θmin = 2.5° |
| ω and φ scan | |
| Absorption correction: multi-scan ( | |
| 19111 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2999 reflections | Δρmax = 0.29 e Å−3 |
| 188 parameters | Δρmin = −0.22 e Å−3 |
| 1 restraint | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0048 (13) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.16369 (8) | 1.08491 (17) | 0.92895 (10) | 0.0564 (5) | |
| N1 | 0.28297 (9) | 1.04304 (17) | 1.01301 (10) | 0.0379 (4) | |
| N2 | 0.25250 (9) | 0.91485 (18) | 0.96943 (10) | 0.0384 (4) | |
| N3 | 0.05671 (13) | 0.6619 (3) | 0.84194 (16) | 0.0827 (8) | |
| F1 | 0.26405 (10) | 1.2489 (2) | 1.14815 (13) | 0.0557 (7) | 0.632 (4) |
| F1B | 0.4820 (2) | 1.1072 (5) | 1.0493 (3) | 0.0761 (16) | 0.368 (4) |
| C6 | 0.44269 (12) | 1.1919 (3) | 1.09238 (15) | 0.0533 (6) | |
| H6 | 0.4719 | 1.1180 | 1.0646 | 0.064* | 0.632 (4) |
| C2 | 0.33059 (12) | 1.2728 (2) | 1.13857 (13) | 0.0447 (5) | |
| H2 | 0.2822 | 1.2548 | 1.1430 | 0.054* | 0.368 (4) |
| C5 | 0.47260 (14) | 1.3288 (3) | 1.12899 (17) | 0.0672 (7) | |
| H5 | 0.5211 | 1.3466 | 1.1259 | 0.081* | |
| C4 | 0.43039 (15) | 1.4381 (3) | 1.16994 (18) | 0.0717 (8) | |
| H4 | 0.4501 | 1.5317 | 1.1943 | 0.086* | |
| C3 | 0.35920 (15) | 1.4110 (3) | 1.17547 (16) | 0.0628 (7) | |
| H3 | 0.3305 | 1.4850 | 1.2038 | 0.075* | |
| C1 | 0.37091 (10) | 1.1596 (2) | 1.09523 (12) | 0.0378 (5) | |
| C7 | 0.33978 (10) | 1.0136 (2) | 1.05237 (12) | 0.0371 (4) | |
| C8 | 0.37763 (12) | 0.8504 (2) | 1.05763 (16) | 0.0551 (6) | |
| H8A | 0.3441 | 0.7635 | 1.0681 | 0.083* | |
| H8B | 0.4116 | 0.8544 | 1.1013 | 0.083* | |
| H8C | 0.4015 | 0.8289 | 1.0069 | 0.083* | |
| C9 | 0.19212 (11) | 0.9487 (2) | 0.92867 (12) | 0.0386 (5) | |
| C10 | 0.16141 (11) | 0.8085 (2) | 0.88031 (11) | 0.0374 (5) | |
| C11 | 0.08970 (12) | 0.7822 (3) | 0.88351 (15) | 0.0545 (6) | |
| H11 | 0.0626 | 0.8519 | 0.9164 | 0.065* | |
| C12 | 0.09829 (18) | 0.5653 (4) | 0.79477 (19) | 0.0829 (9) | |
| H12 | 0.0769 | 0.4795 | 0.7658 | 0.099* | |
| C13 | 0.16935 (14) | 0.5845 (3) | 0.78654 (15) | 0.0601 (6) | |
| H13 | 0.1954 | 0.5155 | 0.7522 | 0.072* | |
| C14 | 0.20124 (11) | 0.7080 (2) | 0.83009 (13) | 0.0460 (5) | |
| H14 | 0.2498 | 0.7242 | 0.8259 | 0.055* | |
| H2' | 0.2692 (10) | 0.8137 (15) | 0.9722 (14) | 0.051 (6)* |
| O1 | 0.0594 (10) | 0.0345 (8) | 0.0752 (12) | 0.0116 (7) | −0.0128 (8) | −0.0112 (7) |
| N1 | 0.0495 (10) | 0.0247 (7) | 0.0393 (9) | −0.0057 (7) | −0.0023 (8) | −0.0022 (6) |
| N2 | 0.0499 (10) | 0.0222 (7) | 0.0431 (9) | −0.0004 (7) | −0.0070 (8) | −0.0031 (6) |
| N3 | 0.0724 (15) | 0.0924 (17) | 0.0834 (18) | −0.0245 (13) | −0.0065 (13) | −0.0225 (14) |
| F1 | 0.0434 (13) | 0.0599 (13) | 0.0639 (14) | 0.0009 (9) | 0.0058 (9) | −0.0186 (10) |
| F1B | 0.053 (2) | 0.072 (3) | 0.103 (3) | −0.0039 (19) | 0.026 (2) | −0.023 (2) |
| C6 | 0.0507 (13) | 0.0508 (13) | 0.0583 (14) | −0.0085 (11) | 0.0020 (11) | −0.0027 (11) |
| C2 | 0.0508 (13) | 0.0406 (11) | 0.0426 (11) | 0.0015 (9) | −0.0056 (10) | −0.0032 (8) |
| C5 | 0.0579 (15) | 0.0559 (14) | 0.088 (2) | −0.0180 (12) | −0.0146 (14) | −0.0041 (13) |
| C4 | 0.0798 (19) | 0.0495 (14) | 0.086 (2) | −0.0141 (13) | −0.0316 (16) | −0.0113 (13) |
| C3 | 0.0851 (19) | 0.0412 (12) | 0.0621 (15) | 0.0095 (12) | −0.0157 (13) | −0.0182 (11) |
| C1 | 0.0479 (12) | 0.0306 (9) | 0.0347 (10) | −0.0059 (8) | −0.0019 (9) | 0.0009 (7) |
| C7 | 0.0423 (11) | 0.0307 (9) | 0.0384 (10) | −0.0041 (8) | 0.0034 (9) | −0.0009 (7) |
| C8 | 0.0528 (13) | 0.0374 (11) | 0.0751 (16) | 0.0050 (10) | −0.0097 (12) | −0.0117 (10) |
| C9 | 0.0479 (11) | 0.0262 (9) | 0.0417 (11) | −0.0001 (8) | −0.0002 (9) | −0.0021 (7) |
| C10 | 0.0449 (11) | 0.0305 (9) | 0.0368 (10) | 0.0001 (8) | −0.0059 (8) | 0.0018 (7) |
| C11 | 0.0489 (13) | 0.0561 (13) | 0.0584 (15) | −0.0020 (11) | −0.0031 (11) | −0.0108 (11) |
| C12 | 0.106 (2) | 0.0739 (18) | 0.0687 (18) | −0.0330 (18) | −0.0120 (17) | −0.0239 (15) |
| C13 | 0.0832 (18) | 0.0477 (12) | 0.0492 (13) | −0.0034 (12) | 0.0003 (12) | −0.0194 (10) |
| C14 | 0.0496 (12) | 0.0428 (11) | 0.0457 (12) | −0.0013 (9) | −0.0019 (10) | −0.0070 (9) |
| O1—C9 | 1.221 (2) | C4—C3 | 1.368 (4) |
| N1—C7 | 1.275 (2) | C4—H4 | 0.9300 |
| N1—N2 | 1.380 (2) | C3—H3 | 0.9300 |
| N2—C9 | 1.350 (3) | C1—C7 | 1.490 (3) |
| N2—H2' | 0.875 (9) | C7—C8 | 1.498 (3) |
| N3—C11 | 1.338 (3) | C8—H8A | 0.9600 |
| N3—C12 | 1.348 (4) | C8—H8B | 0.9600 |
| F1—C2 | 1.284 (3) | C8—H8C | 0.9600 |
| F1B—C6 | 1.230 (4) | C9—C10 | 1.495 (3) |
| C6—C5 | 1.376 (3) | C10—C11 | 1.375 (3) |
| C6—C1 | 1.384 (3) | C10—C14 | 1.377 (3) |
| C6—H6 | 0.9300 | C11—H11 | 0.9300 |
| C2—C3 | 1.376 (3) | C12—C13 | 1.360 (4) |
| C2—C1 | 1.383 (3) | C12—H12 | 0.9300 |
| C2—H2 | 0.9300 | C13—C14 | 1.363 (3) |
| C5—C4 | 1.364 (4) | C13—H13 | 0.9300 |
| C5—H5 | 0.9300 | C14—H14 | 0.9300 |
| C7—N1—N2 | 118.26 (15) | C6—C1—C7 | 121.36 (18) |
| C9—N2—N1 | 117.22 (15) | N1—C7—C1 | 115.06 (16) |
| C9—N2—H2' | 121.3 (14) | N1—C7—C8 | 126.53 (17) |
| N1—N2—H2' | 121.2 (14) | C1—C7—C8 | 118.40 (17) |
| C11—N3—C12 | 115.8 (2) | C7—C8—H8A | 109.5 |
| F1B—C6—C5 | 116.3 (3) | C7—C8—H8B | 109.5 |
| F1B—C6—C1 | 120.6 (3) | H8A—C8—H8B | 109.5 |
| C5—C6—C1 | 122.7 (2) | C7—C8—H8C | 109.5 |
| F1B—C6—H6 | 6.8 | H8A—C8—H8C | 109.5 |
| C5—C6—H6 | 118.7 | H8B—C8—H8C | 109.5 |
| C1—C6—H6 | 118.7 | O1—C9—N2 | 123.50 (17) |
| F1—C2—C3 | 117.0 (2) | O1—C9—C10 | 120.55 (18) |
| F1—C2—C1 | 120.32 (19) | N2—C9—C10 | 115.94 (15) |
| C3—C2—C1 | 122.6 (2) | C11—C10—C14 | 118.21 (19) |
| F1—C2—H2 | 2.6 | C11—C10—C9 | 118.68 (18) |
| C3—C2—H2 | 118.7 | C14—C10—C9 | 123.06 (18) |
| C1—C2—H2 | 118.7 | N3—C11—C10 | 123.6 (2) |
| C4—C5—C6 | 119.3 (2) | N3—C11—H11 | 118.2 |
| C4—C5—H5 | 120.4 | C10—C11—H11 | 118.2 |
| C6—C5—H5 | 120.4 | N3—C12—C13 | 124.6 (2) |
| C5—C4—C3 | 120.4 (2) | N3—C12—H12 | 117.7 |
| C5—C4—H4 | 119.8 | C13—C12—H12 | 117.7 |
| C3—C4—H4 | 119.8 | C12—C13—C14 | 118.0 (2) |
| C4—C3—C2 | 119.2 (2) | C12—C13—H13 | 121.0 |
| C4—C3—H3 | 120.4 | C14—C13—H13 | 121.0 |
| C2—C3—H3 | 120.4 | C13—C14—C10 | 119.8 (2) |
| C2—C1—C6 | 115.79 (18) | C13—C14—H14 | 120.1 |
| C2—C1—C7 | 122.84 (18) | C10—C14—H14 | 120.1 |
| C7—N1—N2—C9 | 179.58 (18) | C6—C1—C7—N1 | −135.9 (2) |
| F1B—C6—C5—C4 | 172.7 (4) | C2—C1—C7—C8 | −138.5 (2) |
| C1—C6—C5—C4 | 0.0 (4) | C6—C1—C7—C8 | 42.9 (3) |
| C6—C5—C4—C3 | 0.8 (4) | N1—N2—C9—O1 | −0.3 (3) |
| C5—C4—C3—C2 | −0.6 (4) | N1—N2—C9—C10 | 178.48 (16) |
| F1—C2—C3—C4 | 177.3 (2) | O1—C9—C10—C11 | −44.3 (3) |
| C1—C2—C3—C4 | −0.5 (4) | N2—C9—C10—C11 | 136.9 (2) |
| F1—C2—C1—C6 | −176.5 (2) | O1—C9—C10—C14 | 133.2 (2) |
| C3—C2—C1—C6 | 1.2 (3) | N2—C9—C10—C14 | −45.7 (3) |
| F1—C2—C1—C7 | 4.8 (3) | C12—N3—C11—C10 | −0.5 (4) |
| C3—C2—C1—C7 | −177.5 (2) | C14—C10—C11—N3 | 1.6 (3) |
| F1B—C6—C1—C2 | −173.4 (3) | C9—C10—C11—N3 | 179.1 (2) |
| C5—C6—C1—C2 | −1.0 (3) | C11—N3—C12—C13 | −1.0 (5) |
| F1B—C6—C1—C7 | 5.3 (4) | N3—C12—C13—C14 | 1.3 (5) |
| C5—C6—C1—C7 | 177.7 (2) | C12—C13—C14—C10 | −0.1 (4) |
| N2—N1—C7—C1 | 177.76 (16) | C11—C10—C14—C13 | −1.2 (3) |
| N2—N1—C7—C8 | −0.9 (3) | C9—C10—C14—C13 | −178.7 (2) |
| C2—C1—C7—N1 | 42.7 (3) |
| H··· | ||||
| N2—H2′···O1i | 0.88 (1) | 2.35 (1) | 3.163 (2) | 156 (2) |
| N2—H2′···N1i | 0.88 (1) | 2.48 (2) | 3.148 (2) | 133 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2′⋯O1i | 0.88 (1) | 2.35 (1) | 3.163 (2) | 156 (2) |
| N2—H2′⋯N1i | 0.88 (1) | 2.48 (2) | 3.148 (2) | 133 (2) |
Symmetry code: (i) .