Literature DB >> 24748440

Spirosoma radiotolerans sp. nov., a gamma-radiation-resistant bacterium isolated from gamma ray-irradiated soil.

Jae-Jin Lee1, Sathiyaraj Srinivasan, Sangyong Lim, Minho Joe, Seonghun Im, So Il Bae, Kyoung Ryun Park, Ji-Hee Han, Se-Hee Park, Bo-Min Joo, Sol-Ji Park, Myung Kyum Kim.   

Abstract

A Gram-negative, short-rod-shaped bacterial strain with gliding motility, designated as DG5A(T), was isolated from a rice field soil in South Korea. Phylogenic analysis using 16S rRNA gene sequence of the new isolate showed that strain DG5A(T) belong to the genus Spirosoma in the family Spirosomaceae, and the highest sequence similarities were 95.5 % with Spirosoma linguale DSM 74(T), 93.4 % with Spirosoma rigui WPCB118(T), 92.8 % with Spirosoma luteum SPM-10(T), 92.7 % with Spirosoma spitsbergense SPM-9(T), and 91.9 % with Spirosoma panaciterrae Gsoil 1519(T). Strain DG5A(T) revealed resistance to gamma and UV radiation. Chemotaxonomic data showed that the most abundant fatty acids were summed feature C(16:1) ω7c/C(16:1) ω6c (36.90 %), C(16:1) ω5c (29.55 %), and iso-C(15:0) (14.78 %), and the major polar lipid was phosphatidylethanolamine (PE). The DNA G+C content of strain DG5A(T) was 49.1 mol%. Together, the phenotypic, phylogenetic, and chemotaxonomic data supported that strain DG5A(T) presents a novel species of the genus Spirosoma, for which the name Spirosoma radiotolerans sp. nov., is proposed. The type strain is DG5A(T) (=KCTC 32455(T) = JCM19447(T)).

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Year:  2014        PMID: 24748440     DOI: 10.1007/s00284-014-0584-x

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  20 in total

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Authors:  J R Battista; A M Earl; M J Park
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Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

3.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
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4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

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5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
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6.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

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7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents.

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Journal:  Curr Microbiol       Date:  2017-12-05       Impact factor: 2.188

2.  Spirosoma luteolum sp. nov. isolated from water.

Authors:  Jae-Jin Lee; Su-Jin Park; Yeon-Hee Lee; Seung-Yeol Lee; Sangkyu Park; Young-Je Cho; Myung Kyum Kim; Leonid N Ten; Hee-Young Jung
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3.  Spirosoma migulaei sp. nov., isolated from soil.

Authors:  Joseph Okiria; Leonid N Ten; Su-Jin Park; Seung-Yeol Lee; Dong Hoon Lee; In-Kyu Kang; Dae Sung Lee; Hee-Young Jung
Journal:  J Microbiol       Date:  2017-12-07       Impact factor: 3.422

4.  Spirosoma humi sp. nov., Isolated from Soil in South Korea.

Authors:  Li Weilan; Jae-Jin Lee; Seung-Yeol Lee; Sangkyu Park; Leonid N Ten; Hee-Young Jung
Journal:  Curr Microbiol       Date:  2017-11-08       Impact factor: 2.188

5.  Spirosoma fluminis sp. nov., a Gamma-Radiation Resistant Bacterium Isolated from Sediment of the Han River in South Korea.

Authors:  Jae-Jin Lee; Yeon Hee Lee; Su Jin Park; Sangyong Lim; Sun-Wook Jeong; Seung-Yeol Lee; Young-Je Cho; Myung Kyum Kim; Hee-Young Jung
Journal:  Curr Microbiol       Date:  2016-08-09       Impact factor: 2.188

6.  Hymenobacter sedentarius sp. nov., isolated from a soil.

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7.  Spirosoma lituiforme sp. nov., isolated from soil.

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8.  Spirosoma pulveris sp. nov., a bacterium isolated from a dust sample collected at Chungnam province, South Korea.

Authors:  Eun Sun Joo; Jae-Jin Lee; Seho Cha; Weonhwa Jheong; Taegun Seo; Sangyong Lim; Sun-Wook Jeong; Sathiyaraj Srinivasan
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9.  Spirosoma montaniterrae sp. nov., an ultraviolet and gamma radiation-resistant bacterium isolated from mountain soil.

Authors:  Jae-Jin Lee; Myung-Suk Kang; Eun Sun Joo; Myung Kyum Kim; Wan-Taek Im; Hee-Young Jung; Sathiyaraj Srinivasan
Journal:  J Microbiol       Date:  2015-06-27       Impact factor: 3.422

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  10 in total

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