Literature DB >> 16151108

Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample.

Fred A Rainey1, Keren Ray, Margarida Ferreira, Bridget Z Gatz, M Fernanda Nobre, Danielle Bagaley, Brian A Rash, Mie-Jung Park, Ashlee M Earl, Nicole C Shank, Alanna M Small, Margaret C Henk, John R Battista, Peter Kämpfer, Milton S da Costa.   

Abstract

The ionizing-radiation-resistant fractions of two soil bacterial communities were investigated by exposing an arid soil from the Sonoran Desert and a nonarid soil from a Louisiana forest to various doses of ionizing radiation using a (60)Co source. The numbers of surviving bacteria decreased as the dose of gamma radiation to which the soils were exposed increased. Bacterial isolates surviving doses of 30 kGy were recovered from the Sonoran Desert soil, while no isolates were recovered from the nonarid forest soil after exposure to doses greater than 13 kGy. The phylogenetic diversities of the surviving culturable bacteria were compared for the two soils using 16S rRNA gene sequence analysis. In addition to a bacterial population that was more resistant to higher doses of ionizing radiation, the diversity of the isolates was greater in the arid soil. The taxonomic diversity of the isolates recovered was found to decrease as the level of ionizing-radiation exposure increased. Bacterial isolates of the genera Deinococcus, Geodermatophilus, and Hymenobacter were still recovered from the arid soil after exposure to doses of 17 to 30 kGy. The recovery of large numbers of extremely ionizing-radiation-resistant bacteria from an arid soil and not from a nonarid soil provides further ecological support for the hypothesis that the ionizing-radiation resistance phenotype is a consequence of the evolution of other DNA repair systems that protect cells against commonly encountered environmental stressors, such as desiccation. The diverse group of bacterial strains isolated from the arid soil sample included 60 Deinococcus strains, the characterization of which revealed nine novel species of this genus.

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Year:  2005        PMID: 16151108      PMCID: PMC1214641          DOI: 10.1128/AEM.71.9.5225-5235.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  38 in total

1.  The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction.

Authors:  W G Weisburg; S J Giovannoni; C R Woese
Journal:  Syst Appl Microbiol       Date:  1989       Impact factor: 4.022

2.  A phylogenetic definition of the major eubacterial taxa.

Authors:  C R Woese; E Stackebrandt; T J Macke; G E Fox
Journal:  Syst Appl Microbiol       Date:  1985       Impact factor: 4.022

3.  Deinococcus frigens sp. nov., Deinococcus saxicola sp. nov., and Deinococcus marmoris sp. nov., low temperature and draught-tolerating, UV-resistant bacteria from continental Antarctica.

Authors:  Peter Hirsch; Claudia A Gallikowski; Jörg Siebert; Klaus Peissl; Reiner Kroppenstedt; Peter Schumann; Erko Stackebrandt; Robert Anderson
Journal:  Syst Appl Microbiol       Date:  2004-11       Impact factor: 4.022

4.  Radiation resistance of clinical Acinetobacter spp.: a need for concern?

Authors:  E A Christensen; P Gerner-Smidt; H Kristensen
Journal:  J Hosp Infect       Date:  1991-06       Impact factor: 3.926

5.  Glucosyl diglyceride lipid structures in Deinococcus radiodurans.

Authors:  Y Huang; R Anderson
Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

6.  Tepidimonas ignava gen. nov., sp. nov., a new chemolithoheterotrophic and slightly thermophilic member of the beta-Proteobacteria.

Authors:  C Moreira; F A Rainey; M F Nobre; M T da Silva; M S da Costa
Journal:  Int J Syst Evol Microbiol       Date:  2000-03       Impact factor: 2.747

7.  Microbial communities of printing paper machines.

Authors:  O M Väisänen; A Weber; A Bennasar; F A Rainey; H J Busse; M S Salkinoja-Salonen
Journal:  J Appl Microbiol       Date:  1998-06       Impact factor: 3.772

8.  Fatty acids are precursors of alkylamines in Deinococcus radiodurans.

Authors:  R Anderson; Y Huang
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

9.  Pillows, an unexpected source of Acinetobacter.

Authors:  A Weernink; W P Severin; I Tjernberg; L Dijkshoorn
Journal:  J Hosp Infect       Date:  1995-03       Impact factor: 3.926

10.  Thermococcus gammatolerans sp. nov., a hyperthermophilic archaeon from a deep-sea hydrothermal vent that resists ionizing radiation.

Authors:  Edmond Jolivet; Stéphane L'Haridon; Erwan Corre; Patrick Forterre; Daniel Prieur
Journal:  Int J Syst Evol Microbiol       Date:  2003-05       Impact factor: 2.747

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  79 in total

1.  A major role for nonenzymatic antioxidant processes in the radioresistance of Halobacterium salinarum.

Authors:  Courtney K Robinson; Kim Webb; Amardeep Kaur; Pawel Jaruga; Miral Dizdaroglu; Nitin S Baliga; Allen Place; Jocelyne Diruggiero
Journal:  J Bacteriol       Date:  2011-01-28       Impact factor: 3.490

2.  The effect of resource islands on abundance and diversity of bacteria in arid soils.

Authors:  Ami Bachar; M Ines M Soares; Osnat Gillor
Journal:  Microb Ecol       Date:  2011-10-29       Impact factor: 4.552

3.  Characterization of Hymenobacter isolates from Victoria Upper Glacier, Antarctica reveals five new species and substantial non-vertical evolution within this genus.

Authors:  Jonathan L Klassen; Julia M Foght
Journal:  Extremophiles       Date:  2010-11-21       Impact factor: 2.395

4.  Prokaryotic Community Diversity Along an Increasing Salt Gradient in a Soda Ash Concentration Pond.

Authors:  Addis Simachew; Anders Lanzén; Amare Gessesse; Lise Øvreås
Journal:  Microb Ecol       Date:  2015-09-26       Impact factor: 4.552

Review 5.  Isolation of Radiation-Resistant Bacteria from Mars Analog Antarctic Dry Valleys by Preselection, and the Correlation between Radiation and Desiccation Resistance.

Authors:  Michaela Musilova; Gary Wright; John M Ward; Lewis R Dartnell
Journal:  Astrobiology       Date:  2015-12       Impact factor: 4.335

6.  Multiple-stress tolerance of ionizing radiation-resistant bacterial isolates obtained from various habitats: correlation between stresses.

Authors:  Manish Shukla; Ruchi Chaturvedi; Dhruti Tamhane; Pranav Vyas; G Archana; Shree Apte; J Bandekar; Anjana Desai
Journal:  Curr Microbiol       Date:  2006-12-18       Impact factor: 2.188

7.  Directed evolution of ionizing radiation resistance in Escherichia coli.

Authors:  Dennis R Harris; Steve V Pollock; Elizabeth A Wood; Reece J Goiffon; Audrey J Klingele; Eric L Cabot; Wendy Schackwitz; Joel Martin; Julie Eggington; Timothy J Durfee; Christina M Middle; Jason E Norton; Michael C Popelars; Hao Li; Sarit A Klugman; Lindsay L Hamilton; Lukas B Bane; Len A Pennacchio; Thomas J Albert; Nicole T Perna; Michael M Cox; John R Battista
Journal:  J Bacteriol       Date:  2009-06-05       Impact factor: 3.490

8.  Novelty and uniqueness patterns of rare members of the soil biosphere.

Authors:  Mostafa S Elshahed; Noha H Youssef; Anne M Spain; Cody Sheik; Fares Z Najar; Leonid O Sukharnikov; Bruce A Roe; James P Davis; Patrick D Schloss; Vanessa L Bailey; Lee R Krumholz
Journal:  Appl Environ Microbiol       Date:  2008-07-07       Impact factor: 4.792

Review 9.  A new perspective on radiation resistance based on Deinococcus radiodurans.

Authors:  Michael J Daly
Journal:  Nat Rev Microbiol       Date:  2009-01-27       Impact factor: 60.633

10.  Deinococcus soli sp. nov., a gamma-radiation-resistant bacterium isolated from rice field soil.

Authors:  Seho Cha; Sathiyaraj Srinivasan; Taegun Seo; Myung Kyum Kim
Journal:  Curr Microbiol       Date:  2014-02-20       Impact factor: 2.188

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