Literature DB >> 24728293

Severe osteoarthritis of the hand associates with common variants within the ALDH1A2 gene and with rare variants at 1p31.

Unnur Styrkarsdottir1, Gudmar Thorleifsson1, Hafdis T Helgadottir1, Nils Bomer2, Sarah Metrustry3, S Bierma-Zeinstra4, Annelieke M Strijbosch2, Evangelos Evangelou5, Deborah Hart3, Marian Beekman6, Aslaug Jonasdottir1, Asgeir Sigurdsson1, Finnur F Eiriksson7, Margret Thorsteinsdottir8, Michael L Frigge1, Augustine Kong1, Sigurjon A Gudjonsson1, Olafur T Magnusson1, Gisli Masson1, Albert Hofman9, Nigel K Arden10, Thorvaldur Ingvarsson11, Stefan Lohmander12, Margreet Kloppenburg13, Fernando Rivadeneira14, Rob G H H Nelissen15, Tim Spector3, Andre Uitterlinden14, P Eline Slagboom6, Unnur Thorsteinsdottir16, Ingileif Jonsdottir16, Ana M Valdes17, Ingrid Meulenbelt18, Joyce van Meurs4, Helgi Jonsson19, Kari Stefansson16.   

Abstract

Osteoarthritis is the most common form of arthritis and is a major cause of pain and disability in the elderly. To search for sequence variants that confer risk of osteoarthritis of the hand, we carried out a genome-wide association study (GWAS) in subjects with severe hand osteoarthritis, using variants identified through the whole-genome sequencing of 2,230 Icelanders. We found two significantly associated loci in the Icelandic discovery set: at 15q22 (frequency of 50.7%, odds ratio (OR) = 1.51, P = 3.99 × 10(-10)) in the ALDH1A2 gene and at 1p31 (frequency of 0.02%, OR = 50.6, P = 9.8 × 10(-10)). Among the carriers of the variant at 1p31 is a family with several members in whom the risk allele segregates with osteoarthritis. The variants within the ALDH1A2 gene were confirmed in replication sets from The Netherlands and the UK, yielding an overall association of OR = 1.46 and P = 1.1 × 10(-11) (rs3204689).

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Year:  2014        PMID: 24728293     DOI: 10.1038/ng.2957

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  49 in total

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Journal:  Nat Genet       Date:  2017-03-20       Impact factor: 38.330

4.  Hand and knee osteoarthritis are associated with reduced diameters in retinal vessels: the AGES-Reykjavik study.

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5.  Genetic Determinants of Radiographic Knee Osteoarthritis in African Americans.

Authors:  Youfang Liu; Michelle S Yau; Laura M Yerges-Armstrong; David J Duggan; Jordan B Renner; Marc C Hochberg; Braxton D Mitchell; Rebecca D Jackson; Joanne M Jordan
Journal:  J Rheumatol       Date:  2017-09-15       Impact factor: 4.666

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7.  Genome-Wide Association Study of Radiographic Knee Osteoarthritis in North American Caucasians.

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8.  Genome-wide association and functional studies identify a role for matrix Gla protein in osteoarthritis of the hand.

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9.  Evolutionary Selection and Constraint on Human Knee Chondrocyte Regulation Impacts Osteoarthritis Risk.

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10.  HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.

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